FFCP PHASE1:Hg19::chr3:15468897..15468909,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=85403|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20907|TSSclassifier=S|UniProt=Q96JC9|association_with_transcript=35bp_to_ENST00000396842_5end|coexpression_cluster_id=C6|description=CAGE_peak_3_at_EAF1_5end|id=chr3:15468897..15468909,+|ontology_enrichment_celltype=CL:0000738!3.44e-56!140;CL:0002057!2.76e-53!42;CL:0000860!8.42e-49!45;CL:0000037!1.46e-46!172;CL:0000566!1.46e-46!172;CL:0000766!9.37e-45!76;CL:0002087!1.33e-44!119;CL:0002032!1.85e-43!165;CL:0000837!1.85e-43!165;CL:0000988!1.27e-42!182;CL:0002031!9.11e-42!124;CL:0002009!4.03e-38!65;CL:0002194!1.16e-35!63;CL:0000576!1.16e-35!63;CL:0000040!1.16e-35!63;CL:0000559!1.16e-35!63;CL:0000557!1.81e-35!71;CL:0000763!2.21e-34!112;CL:0000049!2.21e-34!112;CL:0000839!1.92e-32!70;CL:0000094!3.67e-14!8;CL:0000134!6.29e-14!358;CL:0002320!3.30e-13!365;CL:0000219!1.04e-10!390;CL:0000081!9.40e-10!11;CL:0000048!1.08e-09!430;CL:0000723!3.04e-09!436;CL:0000034!3.60e-09!444;CL:0000838!7.80e-09!52;CL:0000542!1.47e-08!53;CL:0000051!1.47e-08!53;CL:0000224!2.49e-07!4;CL:0002393!9.88e-07!9;CL:0002397!9.88e-07!9|ontology_enrichment_celltype_v019=CL:0000860;2.38e-77;33!CL:0002057;2.38e-77;33!CL:0000473;4.69e-56;39!CL:0000234;4.69e-56;39!CL:0000576;8.32e-46;48!CL:0000766;3.00e-34;69!CL:0000094;6.85e-31;8!CL:0000081;3.09e-22;11!CL:0000767;3.50e-16;3!CL:0000763;4.87e-16;100!CL:0002087;7.96e-12;104!CL:0000771;1.25e-11;2!CL:0000738;2.01e-11;136!CL:0002393;6.54e-09;6!CL:0002397;6.54e-09;6!CL:0000775;1.04e-07;3|ontology_enrichment_celltype_v019_2=CL:0000860,8.42e-85,42;CL:0002057,8.42e-85,42;CL:0000766,3.79e-76,72;CL:0000473,1.76e-73,48;CL:0000234,1.76e-73,48;CL:0002009,4.93e-60,61;CL:0002194,1.26e-57,59;CL:0000576,1.26e-57,59;CL:0000040,1.26e-57,59;CL:0000559,1.26e-57,59;CL:0000557,3.27e-54,67;CL:0000763,4.75e-52,108;CL:0000049,4.75e-52,108;CL:0000839,5.37e-51,66;CL:0000738,2.77e-45,136;CL:0000037,2.04e-35,168;CL:0002032,5.55e-35,161;CL:0000837,5.55e-35,161;CL:0000988,2.80e-33,177;CL:0002087,1.35e-31,115;CL:0000094,3.11e-31,8;CL:0002031,4.46e-30,120;CL:0000081,1.76e-22,11;CL:0000767,2.19e-16,3;CL:0000134,3.48e-13,354;CL:0002320,8.62e-13,361;CL:0000771,1.04e-11,2;CL:0000219,2.10e-11,386;CL:0000034,6.97e-11,441;CL:0000048,1.42e-10,427;CL:0000723,2.50e-10,433;CL:0000775,8.77e-08,3|ontology_enrichment_development_v019=CL:0002057;1.16e-66;42!CL:0000049;1.87e-14;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!7.39e-30!80;UBERON:0002390!1.35e-29!102;UBERON:0003061!1.35e-29!102;UBERON:0001474!8.83e-27!86;UBERON:0002193!1.65e-25!112;UBERON:0004765!9.90e-21!101;UBERON:0001434!9.90e-21!101;UBERON:0002405!2.00e-19!115;UBERON:0002384!8.94e-13!375;UBERON:0002204!7.99e-09!167;UBERON:0003081!2.43e-08!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.55e-47,76;UBERON:0001474,2.47e-43,82;UBERON:0004765,5.36e-39,90;UBERON:0002390,3.67e-38,98;UBERON:0003061,3.67e-38,98;UBERON:0002405,1.46e-37,93;UBERON:0001434,1.53e-34,100;UBERON:0002193,4.27e-34,108;UBERON:0002204,6.04e-20,167;UBERON:0003081,2.44e-15,203;UBERON:0002384,2.97e-12,371;UBERON:0000926,1.58e-08,315;UBERON:0004120,1.58e-08,315;UBERON:0006603,1.58e-08,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,1.96682138424452,2.68680578668049,3.71558695958582,0,0,0,0.154934401160603,0,0,7.75593571944628,6.21687787157439,4.77423915574874,0,0,0,1.59938062657521,1.13362783106643,0.485168122375632,1.85943229524548,1.23350366406548,2.16794459626573,4.31538588483226,5.12321413058201,3.31075121844019,2.41321976515633,1.93645405075148,2.70852973188684,1.12945403725563,1.09162460023138,0.898893937780338,0.918251677112708,0.962787081228281,2.55734850319616,3.29851300186716,3.78980949481101,2.98357325372886,2.03146467040009,2.26954089876456,2.4912889959823,4.01997864410789,8.34372669472322,4.77815458351257,0,1.47311054395026,0.316462387440884,0.633765858935825,0.637812899895131,0.628975936525128,0.786300418025466,0.750884464207532,0.64290234678832,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,1.14681968437569,0,1.12101712596307,0,0.983548850569165,0.393010762749165,0.411202997999018,0.167186495390678,0,0.473447805734733,0,0.111410456885174,0.294605907474837,0,0,0,0.260118695119756,0,0,0.289803085735052,0,0,0,0.453237370790265,0.383220493601921,0.68725489096526,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0.802320587350522,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=85403 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20907 | |||
|TSSclassifier=S | |||
|UniProt=Q96JC9 | |||
|association_with_transcript=35bp_to_ENST00000396842_5end | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_3_at_EAF1_5end | |||
|id=chr3:15468897..15468909,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.44e-56!140;CL:0002057!2.76e-53!42;CL:0000860!8.42e-49!45;CL:0000037!1.46e-46!172;CL:0000566!1.46e-46!172;CL:0000766!9.37e-45!76;CL:0002087!1.33e-44!119;CL:0002032!1.85e-43!165;CL:0000837!1.85e-43!165;CL:0000988!1.27e-42!182;CL:0002031!9.11e-42!124;CL:0002009!4.03e-38!65;CL:0002194!1.16e-35!63;CL:0000576!1.16e-35!63;CL:0000040!1.16e-35!63;CL:0000559!1.16e-35!63;CL:0000557!1.81e-35!71;CL:0000763!2.21e-34!112;CL:0000049!2.21e-34!112;CL:0000839!1.92e-32!70;CL:0000094!3.67e-14!8;CL:0000134!6.29e-14!358;CL:0002320!3.30e-13!365;CL:0000219!1.04e-10!390;CL:0000081!9.40e-10!11;CL:0000048!1.08e-09!430;CL:0000723!3.04e-09!436;CL:0000034!3.60e-09!444;CL:0000838!7.80e-09!52;CL:0000542!1.47e-08!53;CL:0000051!1.47e-08!53;CL:0000224!2.49e-07!4;CL:0002393!9.88e-07!9;CL:0002397!9.88e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.38e-77;33!CL:0002057;2.38e-77;33!CL:0000473;4.69e-56;39!CL:0000234;4.69e-56;39!CL:0000576;8.32e-46;48!CL:0000766;3.00e-34;69!CL:0000094;6.85e-31;8!CL:0000081;3.09e-22;11!CL:0000767;3.50e-16;3!CL:0000763;4.87e-16;100!CL:0002087;7.96e-12;104!CL:0000771;1.25e-11;2!CL:0000738;2.01e-11;136!CL:0002393;6.54e-09;6!CL:0002397;6.54e-09;6!CL:0000775;1.04e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.42e-85,42;CL:0002057,8.42e-85,42;CL:0000766,3.79e-76,72;CL:0000473,1.76e-73,48;CL:0000234,1.76e-73,48;CL:0002009,4.93e-60,61;CL:0002194,1.26e-57,59;CL:0000576,1.26e-57,59;CL:0000040,1.26e-57,59;CL:0000559,1.26e-57,59;CL:0000557,3.27e-54,67;CL:0000763,4.75e-52,108;CL:0000049,4.75e-52,108;CL:0000839,5.37e-51,66;CL:0000738,2.77e-45,136;CL:0000037,2.04e-35,168;CL:0002032,5.55e-35,161;CL:0000837,5.55e-35,161;CL:0000988,2.80e-33,177;CL:0002087,1.35e-31,115;CL:0000094,3.11e-31,8;CL:0002031,4.46e-30,120;CL:0000081,1.76e-22,11;CL:0000767,2.19e-16,3;CL:0000134,3.48e-13,354;CL:0002320,8.62e-13,361;CL:0000771,1.04e-11,2;CL:0000219,2.10e-11,386;CL:0000034,6.97e-11,441;CL:0000048,1.42e-10,427;CL:0000723,2.50e-10,433;CL:0000775,8.77e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.16e-66;42!CL:0000049;1.87e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.39e-30!80;UBERON:0002390!1.35e-29!102;UBERON:0003061!1.35e-29!102;UBERON:0001474!8.83e-27!86;UBERON:0002193!1.65e-25!112;UBERON:0004765!9.90e-21!101;UBERON:0001434!9.90e-21!101;UBERON:0002405!2.00e-19!115;UBERON:0002384!8.94e-13!375;UBERON:0002204!7.99e-09!167;UBERON:0003081!2.43e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.55e-47,76;UBERON:0001474,2.47e-43,82;UBERON:0004765,5.36e-39,90;UBERON:0002390,3.67e-38,98;UBERON:0003061,3.67e-38,98;UBERON:0002405,1.46e-37,93;UBERON:0001434,1.53e-34,100;UBERON:0002193,4.27e-34,108;UBERON:0002204,6.04e-20,167;UBERON:0003081,2.44e-15,203;UBERON:0002384,2.97e-12,371;UBERON:0000926,1.58e-08,315;UBERON:0004120,1.58e-08,315;UBERON:0006603,1.58e-08,315 | |||
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|short_description=p3@EAF1 | |||
}} |
Revision as of 22:16, 12 September 2013
Short description: | p3@EAF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_EAF1_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | 35bp_to_ENST00000396842_5end |
EntrezGene: | EAF1 |
HGNC: | 20907 |
UniProt: | Q96JC9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.55e-47 | 76 |
bone element | 2.47e-43 | 82 |
skeletal element | 5.36e-39 | 90 |
hematopoietic system | 3.67e-38 | 98 |
blood island | 3.67e-38 | 98 |
immune system | 1.46e-37 | 93 |
skeletal system | 1.53e-34 | 100 |
hemolymphoid system | 4.27e-34 | 108 |
musculoskeletal system | 6.04e-20 | 167 |
lateral plate mesoderm | 2.44e-15 | 203 |
connective tissue | 2.97e-12 | 371 |
mesoderm | 1.58e-08 | 315 |
mesoderm-derived structure | 1.58e-08 | 315 |
presumptive mesoderm | 1.58e-08 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.