FFCP PHASE1:Mm9::chr12:14025456..14025458,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2033|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:14025456..14025458,+|id=chr12:14025456..14025458,+|ontology_enrichment_celltype=CL:0000553!7.14e-18!6;CL:0000556!7.14e-18!6;CL:0000414!1.83e-13!11;CL:0000050!7.53e-12!9;CL:0002031!7.58e-10!25;CL:0000839!3.98e-08!13;CL:0000988!1.91e-07!32;CL:0002032!1.91e-07!32;CL:0000037!1.91e-07!32;CL:0000566!1.91e-07!32;CL:0000837!1.91e-07!32|ontology_enrichment_celltype_v019_2=CL:0000553,9.89e-31,6;CL:0000556,9.89e-31,6;CL:0000050,1.52e-20,9;CL:0000839,2.97e-14,13;CL:0002031,4.68e-14,25;CL:0000763,1.37e-11,16;CL:0000988,6.87e-11,32;CL:0002032,6.87e-11,32;CL:0000037,6.87e-11,32;CL:0000837,6.87e-11,32;CL:0002027,1.02e-10,3;CL:0002006,1.02e-10,3;CL:0002024,1.02e-10,3;CL:0000049,9.27e-10,19;CL:0000945,2.44e-08,1;CL:0000236,2.44e-08,1;CL:0000826,2.44e-08,1;CL:0002320,1.99e-07,46;CL:0000134,1.99e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000331!5.12e-13!3;UBERON:0002116!5.12e-13!3;UBERON:0001204!5.12e-13!3;UBERON:0001168!5.12e-13!3;UBERON:0001962!6.33e-10!2;UBERON:0001961!6.33e-10!2;UBERON:0001744!6.33e-10!2;UBERON:0000344!6.09e-07!15;UBERON:0002465!7.10e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000331,8.23e-22,3;UBERON:0002116,8.23e-22,3;UBERON:0001204,8.23e-22,3;UBERON:0001168,8.23e-22,3;UBERON:0002108,1.54e-16,4;UBERON:0001962,2.44e-16,2;UBERON:0001961,2.44e-16,2;UBERON:0001744,2.44e-16,2;UBERON:0000344,3.07e-12,15;UBERON:0002371,1.37e-11,16;UBERON:0002465,3.27e-11,3;UBERON:0003199,4.39e-09,1;UBERON:0001474,2.00e-08,22;UBERON:0004765,2.00e-08,22;UBERON:0001434,2.00e-08,22;UBERON:0004923,1.20e-07,24;UBERON:0002384,1.99e-07,46;UBERON:0002193,3.45e-07,48;UBERON:0002405,3.45e-07,48|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.7638643063044,9.09430441566591,31.861678701182,37.8435836751839,23.3414308488917,0,0,48.8443605689809,47.5177495696418,71.575695692957,0,0,0,5.32065574477847,2.77233142735924,1.33038306393183,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,2.18117387875057,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0.169978429993855,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:14025456..14025458,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2033 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:14025456..14025458,+ | |||
|id=chr12:14025456..14025458,+ | |||
|ontology_enrichment_celltype=CL:0000553!7.14e-18!6;CL:0000556!7.14e-18!6;CL:0000414!1.83e-13!11;CL:0000050!7.53e-12!9;CL:0002031!7.58e-10!25;CL:0000839!3.98e-08!13;CL:0000988!1.91e-07!32;CL:0002032!1.91e-07!32;CL:0000037!1.91e-07!32;CL:0000566!1.91e-07!32;CL:0000837!1.91e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,9.89e-31,6;CL:0000556,9.89e-31,6;CL:0000050,1.52e-20,9;CL:0000839,2.97e-14,13;CL:0002031,4.68e-14,25;CL:0000763,1.37e-11,16;CL:0000988,6.87e-11,32;CL:0002032,6.87e-11,32;CL:0000037,6.87e-11,32;CL:0000837,6.87e-11,32;CL:0002027,1.02e-10,3;CL:0002006,1.02e-10,3;CL:0002024,1.02e-10,3;CL:0000049,9.27e-10,19;CL:0000945,2.44e-08,1;CL:0000236,2.44e-08,1;CL:0000826,2.44e-08,1;CL:0002320,1.99e-07,46;CL:0000134,1.99e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000331!5.12e-13!3;UBERON:0002116!5.12e-13!3;UBERON:0001204!5.12e-13!3;UBERON:0001168!5.12e-13!3;UBERON:0001962!6.33e-10!2;UBERON:0001961!6.33e-10!2;UBERON:0001744!6.33e-10!2;UBERON:0000344!6.09e-07!15;UBERON:0002465!7.10e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000331,8.23e-22,3;UBERON:0002116,8.23e-22,3;UBERON:0001204,8.23e-22,3;UBERON:0001168,8.23e-22,3;UBERON:0002108,1.54e-16,4;UBERON:0001962,2.44e-16,2;UBERON:0001961,2.44e-16,2;UBERON:0001744,2.44e-16,2;UBERON:0000344,3.07e-12,15;UBERON:0002371,1.37e-11,16;UBERON:0002465,3.27e-11,3;UBERON:0003199,4.39e-09,1;UBERON:0001474,2.00e-08,22;UBERON:0004765,2.00e-08,22;UBERON:0001434,2.00e-08,22;UBERON:0004923,1.20e-07,24;UBERON:0002384,1.99e-07,46;UBERON:0002193,3.45e-07,48;UBERON:0002405,3.45e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.7638643063044,9.09430441566591,31.861678701182,37.8435836751839,23.3414308488917,0,0,48.8443605689809,47.5177495696418,71.575695692957,0,0,0,5.32065574477847,2.77233142735924,1.33038306393183,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,2.18117387875057,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0.169978429993855,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:14025456..14025458,+ | |||
}} |
Revision as of 22:32, 12 September 2013
Short description: | p@chr12:14025456..14025458, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:14025456..14025458, + |
Coexpression cluster: | MCL_coexpression_mm9:2033 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 9.89e-31 | 6 |
megakaryocyte | 9.89e-31 | 6 |
megakaryocyte-erythroid progenitor cell | 1.52e-20 | 9 |
myeloid lineage restricted progenitor cell | 2.97e-14 | 13 |
hematopoietic lineage restricted progenitor cell | 4.68e-14 | 25 |
myeloid cell | 1.37e-11 | 16 |
hematopoietic cell | 6.87e-11 | 32 |
hematopoietic oligopotent progenitor cell | 6.87e-11 | 32 |
hematopoietic stem cell | 6.87e-11 | 32 |
hematopoietic multipotent progenitor cell | 6.87e-11 | 32 |
CD9-positive, CD41-positive megakaryocyte cell | 1.02e-10 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.02e-10 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.02e-10 | 3 |
common myeloid progenitor | 9.27e-10 | 19 |
lymphocyte of B lineage | 2.44e-08 | 1 |
B cell | 2.44e-08 | 1 |
pro-B cell | 2.44e-08 | 1 |
connective tissue cell | 1.99e-07 | 46 |
mesenchymal cell | 1.99e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
ileal mucosa | 8.23e-22 | 3 |
ileum | 8.23e-22 | 3 |
mucosa of small intestine | 8.23e-22 | 3 |
wall of small intestine | 8.23e-22 | 3 |
small intestine | 1.54e-16 | 4 |
gut-associated lymphoid tissue | 2.44e-16 | 2 |
mucosa-associated lymphoid tissue | 2.44e-16 | 2 |
lymphoid tissue | 2.44e-16 | 2 |
mucosa | 3.07e-12 | 15 |
bone marrow | 1.37e-11 | 16 |
lymphoid system | 3.27e-11 | 3 |
egg chamber | 4.39e-09 | 1 |
bone element | 2.00e-08 | 22 |
skeletal element | 2.00e-08 | 22 |
skeletal system | 2.00e-08 | 22 |
organ component layer | 1.20e-07 | 24 |
connective tissue | 1.99e-07 | 46 |
hemolymphoid system | 3.45e-07 | 48 |
immune system | 3.45e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.