FFCP PHASE1:Mm9::chr13:105766060..105766062,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:105766060..105766062,-|id=chr13:105766060..105766062,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!4.93e-08!63;UBERON:0001049!8.52e-08!52;UBERON:0005068!8.52e-08!52;UBERON:0006241!8.52e-08!52;UBERON:0007135!8.52e-08!52;UBERON:0000955!1.21e-07!50;UBERON:0006238!1.21e-07!50;UBERON:0002616!5.00e-07!49;UBERON:0002346!7.82e-07!71;UBERON:0003075!7.82e-07!71;UBERON:0007284!7.82e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.43e-18,10;UBERON:0000411,3.43e-18,10;UBERON:0001950,3.43e-18,10;UBERON:0000956,2.45e-13,21;UBERON:0001869,2.45e-13,21;UBERON:0000203,2.45e-13,21;UBERON:0001851,3.34e-12,1;UBERON:0005889,3.34e-12,1;UBERON:0000955,2.00e-11,47;UBERON:0006238,2.00e-11,47;UBERON:0002619,6.82e-11,17;UBERON:0003528,1.02e-09,29;UBERON:0002791,1.02e-09,29;UBERON:0001893,1.02e-09,29;UBERON:0002616,1.08e-08,46;UBERON:0002020,2.58e-08,34;UBERON:0001049,1.09e-07,52;UBERON:0005068,1.09e-07,52;UBERON:0006241,1.09e-07,52;UBERON:0007135,1.09e-07,52;UBERON:0000073,2.11e-07,54;UBERON:0001017,2.53e-07,73;UBERON:0002780,2.89e-07,39;UBERON:0001890,2.89e-07,39;UBERON:0006240,2.89e-07,39;UBERON:0001016,4.00e-07,75;UBERON:0003080,4.35e-07,40|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0.46081959976873,0,0,0,0.279182999001381,0.56276261003168,0.61119299110724,0.294628585473668,0,0.186399445825301,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0,0,0.23517741427141,0,0,0,0,0.161766849947409,0,0,0,2.04946557908083,0.41889341362691,0,0,0,0,0,0.457500602818626,0.251308704225729,1.04294592115366,2.04572365864264,0.20778804455956,0.811206315338788,0.203678727700633,0,0,0,0.130120442962704,0,0,0,0.272145996605311,0.384341160854549,0,0.517406741478031,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0,0.492502392237286,0.162137619091711,0,0.219550115291051,0,0.420579897128254,0.205809224758569,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0.754005626400808,0,0.38992817423824,0,0.216138049874694,0.398282546508734,0,0,0,0.407302655690628,0,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0.141940085208269,0.35613120733451,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0.21183207086382,0,0,0.484393280087717,0.120625849856312,0,0.164140899745061,0,0.556275906031529,0,0,0.185194527369712,0,0,0,0,0,0.138199973804424,0,0,0.203319467126849,0.108005340821801,0.418176592028937,0,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.234714477291508,0.39061315453185,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0,0,0.36630324853453,0,0,1.6942555278512,2.30162618253588,0,3.78077001156113,0.685082519770642,0,0,0.45032120322422,2.71885445390523,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0.280924522409647,0.256100609619477,0.0574354689556133,0.476293691283074,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0,0.238436189947321,0.145346416632329,0.470546902076653,0.169229215783353,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p@chr13:105766060..105766062,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:105766060..105766062,- | |||
|id=chr13:105766060..105766062,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.93e-08!63;UBERON:0001049!8.52e-08!52;UBERON:0005068!8.52e-08!52;UBERON:0006241!8.52e-08!52;UBERON:0007135!8.52e-08!52;UBERON:0000955!1.21e-07!50;UBERON:0006238!1.21e-07!50;UBERON:0002616!5.00e-07!49;UBERON:0002346!7.82e-07!71;UBERON:0003075!7.82e-07!71;UBERON:0007284!7.82e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.43e-18,10;UBERON:0000411,3.43e-18,10;UBERON:0001950,3.43e-18,10;UBERON:0000956,2.45e-13,21;UBERON:0001869,2.45e-13,21;UBERON:0000203,2.45e-13,21;UBERON:0001851,3.34e-12,1;UBERON:0005889,3.34e-12,1;UBERON:0000955,2.00e-11,47;UBERON:0006238,2.00e-11,47;UBERON:0002619,6.82e-11,17;UBERON:0003528,1.02e-09,29;UBERON:0002791,1.02e-09,29;UBERON:0001893,1.02e-09,29;UBERON:0002616,1.08e-08,46;UBERON:0002020,2.58e-08,34;UBERON:0001049,1.09e-07,52;UBERON:0005068,1.09e-07,52;UBERON:0006241,1.09e-07,52;UBERON:0007135,1.09e-07,52;UBERON:0000073,2.11e-07,54;UBERON:0001017,2.53e-07,73;UBERON:0002780,2.89e-07,39;UBERON:0001890,2.89e-07,39;UBERON:0006240,2.89e-07,39;UBERON:0001016,4.00e-07,75;UBERON:0003080,4.35e-07,40 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0.46081959976873,0,0,0,0.279182999001381,0.56276261003168,0.61119299110724,0.294628585473668,0,0.186399445825301,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0,0,0.23517741427141,0,0,0,0,0.161766849947409,0,0,0,2.04946557908083,0.41889341362691,0,0,0,0,0,0.457500602818626,0.251308704225729,1.04294592115366,2.04572365864264,0.20778804455956,0.811206315338788,0.203678727700633,0,0,0,0.130120442962704,0,0,0,0.272145996605311,0.384341160854549,0,0.517406741478031,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0,0.492502392237286,0.162137619091711,0,0.219550115291051,0,0.420579897128254,0.205809224758569,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0.754005626400808,0,0.38992817423824,0,0.216138049874694,0.398282546508734,0,0,0,0.407302655690628,0,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0.141940085208269,0.35613120733451,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0.21183207086382,0,0,0.484393280087717,0.120625849856312,0,0.164140899745061,0,0.556275906031529,0,0,0.185194527369712,0,0,0,0,0,0.138199973804424,0,0,0.203319467126849,0.108005340821801,0.418176592028937,0,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.234714477291508,0.39061315453185,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0,0,0.36630324853453,0,0,1.6942555278512,2.30162618253588,0,3.78077001156113,0.685082519770642,0,0,0.45032120322422,2.71885445390523,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0.280924522409647,0.256100609619477,0.0574354689556133,0.476293691283074,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0,0.238436189947321,0.145346416632329,0.470546902076653,0.169229215783353,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr13:105766060..105766062,- | |||
}} |
Revision as of 23:48, 12 September 2013
Short description: | p@chr13:105766060..105766062, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:105766060..105766062, - |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.43e-18 | 10 |
visual cortex | 3.43e-18 | 10 |
neocortex | 3.43e-18 | 10 |
cerebral cortex | 2.45e-13 | 21 |
cerebral hemisphere | 2.45e-13 | 21 |
pallium | 2.45e-13 | 21 |
cortex | 3.34e-12 | 1 |
zygote cortex | 3.34e-12 | 1 |
brain | 2.00e-11 | 47 |
future brain | 2.00e-11 | 47 |
regional part of cerebral cortex | 6.82e-11 | 17 |
brain grey matter | 1.02e-09 | 29 |
regional part of telencephalon | 1.02e-09 | 29 |
telencephalon | 1.02e-09 | 29 |
regional part of brain | 1.08e-08 | 46 |
gray matter | 2.58e-08 | 34 |
neural tube | 1.09e-07 | 52 |
neural rod | 1.09e-07 | 52 |
future spinal cord | 1.09e-07 | 52 |
neural keel | 1.09e-07 | 52 |
regional part of nervous system | 2.11e-07 | 54 |
central nervous system | 2.53e-07 | 73 |
regional part of forebrain | 2.89e-07 | 39 |
forebrain | 2.89e-07 | 39 |
future forebrain | 2.89e-07 | 39 |
nervous system | 4.00e-07 | 75 |
anterior neural tube | 4.35e-07 | 40 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.