FFCP PHASE1:Mm9::chr14:109281812..109281821,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:109281812..109281821,-|id=chr14:109281812..109281821,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!2.49e-23!50;UBERON:0006238!2.49e-23!50;UBERON:0002616!6.61e-22!49;UBERON:0001049!3.75e-20!52;UBERON:0005068!3.75e-20!52;UBERON:0006241!3.75e-20!52;UBERON:0007135!3.75e-20!52;UBERON:0000033!1.46e-18!63;UBERON:0003080!1.39e-17!40;UBERON:0002021!4.09e-17!10;UBERON:0000411!4.09e-17!10;UBERON:0001950!4.09e-17!10;UBERON:0002780!2.74e-16!39;UBERON:0001890!2.74e-16!39;UBERON:0006240!2.74e-16!39;UBERON:0001017!3.48e-16!73;UBERON:0005743!3.48e-16!73;UBERON:0002619!7.42e-16!17;UBERON:0000073!1.50e-15!75;UBERON:0001016!1.50e-15!75;UBERON:0002346!2.23e-15!71;UBERON:0003075!2.23e-15!71;UBERON:0007284!2.23e-15!71;UBERON:0002020!2.69e-15!34;UBERON:0002791!7.55e-15!29;UBERON:0003528!7.55e-15!29;UBERON:0001893!7.55e-15!29;UBERON:0003056!8.05e-15!49;UBERON:0000956!3.03e-12!21;UBERON:0001869!3.03e-12!21;UBERON:0000203!3.03e-12!21;UBERON:0000153!4.89e-12!94;UBERON:0002298!7.03e-12!6;UBERON:0007811!1.24e-11!86;UBERON:0004121!2.71e-11!102;UBERON:0000924!2.71e-11!102;UBERON:0006601!2.71e-11!102;UBERON:0002950!2.34e-08!4;UBERON:0001891!2.34e-08!4;UBERON:0009616!2.34e-08!4|ontology_enrichment_uberon_v019_2=UBERON:0002021,8.43e-44,10;UBERON:0000411,8.43e-44,10;UBERON:0001950,8.43e-44,10;UBERON:0002619,3.95e-26,17;UBERON:0000956,2.63e-21,21;UBERON:0001869,2.63e-21,21;UBERON:0000203,2.63e-21,21;UBERON:0003528,1.24e-15,29;UBERON:0002791,1.24e-15,29;UBERON:0001893,1.24e-15,29;UBERON:0002020,1.96e-13,34;UBERON:0002780,8.52e-12,39;UBERON:0001890,8.52e-12,39;UBERON:0006240,8.52e-12,39;UBERON:0003080,1.62e-11,40;UBERON:0002616,4.29e-10,46;UBERON:0000955,6.83e-10,47;UBERON:0006238,6.83e-10,47;UBERON:0003056,1.64e-09,49;UBERON:0001049,5.37e-09,52;UBERON:0005068,5.37e-09,52;UBERON:0006241,5.37e-09,52;UBERON:0007135,5.37e-09,52;UBERON:0000073,1.10e-08,54;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.255374676170375,0.153606533256243,0,0.182975287204819,0,0.279182999001381,0.56276261003168,0.30559649555362,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.299581278809645,0,0,0,0.255715457330331,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0.572895513439397,2.40594455281163,0.685082519770642,0.755393897389701,1.35004500046361,0.900642406448441,1.35942722695261,1.55328093525546,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0,0,0.182927972872773,0.526139422875686,0,0,0,0,0,0.309873682371932,0,0,0,0,0,0,0|short_description=p@chr14:109281812..109281821,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:109281812..109281821,- | |||
|id=chr14:109281812..109281821,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!2.49e-23!50;UBERON:0006238!2.49e-23!50;UBERON:0002616!6.61e-22!49;UBERON:0001049!3.75e-20!52;UBERON:0005068!3.75e-20!52;UBERON:0006241!3.75e-20!52;UBERON:0007135!3.75e-20!52;UBERON:0000033!1.46e-18!63;UBERON:0003080!1.39e-17!40;UBERON:0002021!4.09e-17!10;UBERON:0000411!4.09e-17!10;UBERON:0001950!4.09e-17!10;UBERON:0002780!2.74e-16!39;UBERON:0001890!2.74e-16!39;UBERON:0006240!2.74e-16!39;UBERON:0001017!3.48e-16!73;UBERON:0005743!3.48e-16!73;UBERON:0002619!7.42e-16!17;UBERON:0000073!1.50e-15!75;UBERON:0001016!1.50e-15!75;UBERON:0002346!2.23e-15!71;UBERON:0003075!2.23e-15!71;UBERON:0007284!2.23e-15!71;UBERON:0002020!2.69e-15!34;UBERON:0002791!7.55e-15!29;UBERON:0003528!7.55e-15!29;UBERON:0001893!7.55e-15!29;UBERON:0003056!8.05e-15!49;UBERON:0000956!3.03e-12!21;UBERON:0001869!3.03e-12!21;UBERON:0000203!3.03e-12!21;UBERON:0000153!4.89e-12!94;UBERON:0002298!7.03e-12!6;UBERON:0007811!1.24e-11!86;UBERON:0004121!2.71e-11!102;UBERON:0000924!2.71e-11!102;UBERON:0006601!2.71e-11!102;UBERON:0002950!2.34e-08!4;UBERON:0001891!2.34e-08!4;UBERON:0009616!2.34e-08!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,8.43e-44,10;UBERON:0000411,8.43e-44,10;UBERON:0001950,8.43e-44,10;UBERON:0002619,3.95e-26,17;UBERON:0000956,2.63e-21,21;UBERON:0001869,2.63e-21,21;UBERON:0000203,2.63e-21,21;UBERON:0003528,1.24e-15,29;UBERON:0002791,1.24e-15,29;UBERON:0001893,1.24e-15,29;UBERON:0002020,1.96e-13,34;UBERON:0002780,8.52e-12,39;UBERON:0001890,8.52e-12,39;UBERON:0006240,8.52e-12,39;UBERON:0003080,1.62e-11,40;UBERON:0002616,4.29e-10,46;UBERON:0000955,6.83e-10,47;UBERON:0006238,6.83e-10,47;UBERON:0003056,1.64e-09,49;UBERON:0001049,5.37e-09,52;UBERON:0005068,5.37e-09,52;UBERON:0006241,5.37e-09,52;UBERON:0007135,5.37e-09,52;UBERON:0000073,1.10e-08,54;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.255374676170375,0.153606533256243,0,0.182975287204819,0,0.279182999001381,0.56276261003168,0.30559649555362,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.299581278809645,0,0,0,0.255715457330331,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0.572895513439397,2.40594455281163,0.685082519770642,0.755393897389701,1.35004500046361,0.900642406448441,1.35942722695261,1.55328093525546,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0,0,0.182927972872773,0.526139422875686,0,0,0,0,0,0.309873682371932,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:109281812..109281821,- | |||
}} |
Revision as of 01:29, 13 September 2013
Short description: | p@chr14:109281812..109281821, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:109281812..109281821, - |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 8.43e-44 | 10 |
visual cortex | 8.43e-44 | 10 |
neocortex | 8.43e-44 | 10 |
regional part of cerebral cortex | 3.95e-26 | 17 |
cerebral cortex | 2.63e-21 | 21 |
cerebral hemisphere | 2.63e-21 | 21 |
pallium | 2.63e-21 | 21 |
brain grey matter | 1.24e-15 | 29 |
regional part of telencephalon | 1.24e-15 | 29 |
telencephalon | 1.24e-15 | 29 |
gray matter | 1.96e-13 | 34 |
regional part of forebrain | 8.52e-12 | 39 |
forebrain | 8.52e-12 | 39 |
future forebrain | 8.52e-12 | 39 |
anterior neural tube | 1.62e-11 | 40 |
regional part of brain | 4.29e-10 | 46 |
brain | 6.83e-10 | 47 |
future brain | 6.83e-10 | 47 |
pre-chordal neural plate | 1.64e-09 | 49 |
neural tube | 5.37e-09 | 52 |
neural rod | 5.37e-09 | 52 |
future spinal cord | 5.37e-09 | 52 |
neural keel | 5.37e-09 | 52 |
regional part of nervous system | 1.10e-08 | 54 |
neurectoderm | 2.08e-07 | 64 |
neural plate | 2.08e-07 | 64 |
presumptive neural plate | 2.08e-07 | 64 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.