FFCP PHASE1:Mm9::chr14:20694798..20694806,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:20694798..20694806,-|id=chr14:20694798..20694806,-|ontology_enrichment_celltype=CL:0000117!3.89e-12!23;CL:0000337!3.89e-12!23;CL:0000540!3.58e-11!33;CL:0000047!3.58e-11!33;CL:0000031!3.58e-11!33;CL:0000404!3.58e-11!33;CL:0000393!1.62e-09!39;CL:0000211!1.62e-09!39;CL:0000221!1.20e-07!44;CL:0000133!1.20e-07!44;CL:0002319!5.33e-07!43|ontology_enrichment_celltype_v019_2=CL:0002612,1.99e-20,3;CL:0000117,1.32e-10,23;CL:0000337,1.32e-10,23;CL:0000540,1.52e-07,33;CL:0000047,1.52e-07,33;CL:0000031,1.52e-07,33;CL:0000404,1.52e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.34e-12!73;UBERON:0005743!1.34e-12!73;UBERON:0002346!2.73e-12!71;UBERON:0003075!2.73e-12!71;UBERON:0007284!2.73e-12!71;UBERON:0001049!4.98e-12!52;UBERON:0005068!4.98e-12!52;UBERON:0006241!4.98e-12!52;UBERON:0007135!4.98e-12!52;UBERON:0000073!6.15e-12!75;UBERON:0001016!6.15e-12!75;UBERON:0004121!1.45e-11!102;UBERON:0000924!1.45e-11!102;UBERON:0006601!1.45e-11!102;UBERON:0000033!3.08e-11!63;UBERON:0003056!2.27e-10!49;UBERON:0002616!6.73e-10!49;UBERON:0000955!1.57e-09!50;UBERON:0006238!1.57e-09!50;UBERON:0003080!3.24e-09!40;UBERON:0002780!1.38e-08!39;UBERON:0001890!1.38e-08!39;UBERON:0006240!1.38e-08!39;UBERON:0002020!1.46e-08!34|ontology_enrichment_uberon_v019_2=UBERON:0002257,1.99e-20,3;UBERON:0001948,1.08e-12,5;UBERON:0002315,1.08e-12,5;UBERON:0000369,1.62e-12,5;UBERON:0002435,1.62e-12,5;UBERON:0000204,1.62e-12,5;UBERON:0010082,1.62e-12,5;UBERON:0002020,3.54e-11,34;UBERON:0002240,9.54e-11,6;UBERON:0005174,9.54e-11,6;UBERON:0001137,9.54e-11,6;UBERON:0002420,3.41e-08,8;UBERON:0007245,3.41e-08,8;UBERON:0010009,3.41e-08,8;UBERON:0010011,3.41e-08,8;UBERON:0000454,3.41e-08,8;UBERON:0001017,1.48e-07,73;UBERON:0001049,1.94e-07,52;UBERON:0005068,1.94e-07,52;UBERON:0006241,1.94e-07,52;UBERON:0007135,1.94e-07,52;UBERON:0001016,2.31e-07,75;UBERON:0000073,3.56e-07,54|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0,0.829516898467821,0.945041568321835,0.630974884054146,0,0.220868540951614,0.122490799214954,0.191690942036473,0,0,0.510749352340751,0.307213066512487,0.263772575460388,0.0914876436024097,1.04182674111352,0,0.56276261003168,0.15279824777681,1.17851434189467,2.56269025438385,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0,0.608930956624282,0,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0.41889341362691,0,0.239630249011841,0,0.127070227073065,0.299581278809645,0,1.25654352112864,0.347648640384553,0.255715457330331,0.41557608911912,0.162241263067758,0.203678727700633,0.124406970610093,0,0,0.130120442962704,0,0,0.30140963567143,0.136072998302656,0.640568601424249,0.187403449119458,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0.233530684734339,0,0,0,0,0,0,0,3.2929475961371,0,0,0,0,0.128867461322093,0.201683524623343,0,0.380451252225118,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.387904974335251,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0.477937595905104,0.222798674082394,0,0,0.876767573733936,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0.228778173206523,0.169978429993855,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0,0.171853182343688,0,0,0,0,0,0,0.62272408550506,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0.192075457214608,0.114870937911227,0.476293691283074,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0.423073039458382,0,0,0.271608227691724,0,0.118635018124174,0,0.409231043169689,0.154936841185966,0,0.499621155875892,0.467863216890817,0,0,0,0.231867835620421|short_description=p@chr14:20694798..20694806,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:20694798..20694806,- | |||
|id=chr14:20694798..20694806,- | |||
|ontology_enrichment_celltype=CL:0000117!3.89e-12!23;CL:0000337!3.89e-12!23;CL:0000540!3.58e-11!33;CL:0000047!3.58e-11!33;CL:0000031!3.58e-11!33;CL:0000404!3.58e-11!33;CL:0000393!1.62e-09!39;CL:0000211!1.62e-09!39;CL:0000221!1.20e-07!44;CL:0000133!1.20e-07!44;CL:0002319!5.33e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,1.99e-20,3;CL:0000117,1.32e-10,23;CL:0000337,1.32e-10,23;CL:0000540,1.52e-07,33;CL:0000047,1.52e-07,33;CL:0000031,1.52e-07,33;CL:0000404,1.52e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.34e-12!73;UBERON:0005743!1.34e-12!73;UBERON:0002346!2.73e-12!71;UBERON:0003075!2.73e-12!71;UBERON:0007284!2.73e-12!71;UBERON:0001049!4.98e-12!52;UBERON:0005068!4.98e-12!52;UBERON:0006241!4.98e-12!52;UBERON:0007135!4.98e-12!52;UBERON:0000073!6.15e-12!75;UBERON:0001016!6.15e-12!75;UBERON:0004121!1.45e-11!102;UBERON:0000924!1.45e-11!102;UBERON:0006601!1.45e-11!102;UBERON:0000033!3.08e-11!63;UBERON:0003056!2.27e-10!49;UBERON:0002616!6.73e-10!49;UBERON:0000955!1.57e-09!50;UBERON:0006238!1.57e-09!50;UBERON:0003080!3.24e-09!40;UBERON:0002780!1.38e-08!39;UBERON:0001890!1.38e-08!39;UBERON:0006240!1.38e-08!39;UBERON:0002020!1.46e-08!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002257,1.99e-20,3;UBERON:0001948,1.08e-12,5;UBERON:0002315,1.08e-12,5;UBERON:0000369,1.62e-12,5;UBERON:0002435,1.62e-12,5;UBERON:0000204,1.62e-12,5;UBERON:0010082,1.62e-12,5;UBERON:0002020,3.54e-11,34;UBERON:0002240,9.54e-11,6;UBERON:0005174,9.54e-11,6;UBERON:0001137,9.54e-11,6;UBERON:0002420,3.41e-08,8;UBERON:0007245,3.41e-08,8;UBERON:0010009,3.41e-08,8;UBERON:0010011,3.41e-08,8;UBERON:0000454,3.41e-08,8;UBERON:0001017,1.48e-07,73;UBERON:0001049,1.94e-07,52;UBERON:0005068,1.94e-07,52;UBERON:0006241,1.94e-07,52;UBERON:0007135,1.94e-07,52;UBERON:0001016,2.31e-07,75;UBERON:0000073,3.56e-07,54 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0,0.829516898467821,0.945041568321835,0.630974884054146,0,0.220868540951614,0.122490799214954,0.191690942036473,0,0,0.510749352340751,0.307213066512487,0.263772575460388,0.0914876436024097,1.04182674111352,0,0.56276261003168,0.15279824777681,1.17851434189467,2.56269025438385,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0,0.608930956624282,0,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0.41889341362691,0,0.239630249011841,0,0.127070227073065,0.299581278809645,0,1.25654352112864,0.347648640384553,0.255715457330331,0.41557608911912,0.162241263067758,0.203678727700633,0.124406970610093,0,0,0.130120442962704,0,0,0.30140963567143,0.136072998302656,0.640568601424249,0.187403449119458,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0.233530684734339,0,0,0,0,0,0,0,3.2929475961371,0,0,0,0,0.128867461322093,0.201683524623343,0,0.380451252225118,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.387904974335251,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0.477937595905104,0.222798674082394,0,0,0.876767573733936,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0.228778173206523,0.169978429993855,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0,0.171853182343688,0,0,0,0,0,0,0.62272408550506,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0.192075457214608,0.114870937911227,0.476293691283074,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0.423073039458382,0,0,0.271608227691724,0,0.118635018124174,0,0.409231043169689,0.154936841185966,0,0.499621155875892,0.467863216890817,0,0,0,0.231867835620421 | |||
|short_description=p@chr14:20694798..20694806,- | |||
}} |
Revision as of 01:44, 13 September 2013
Short description: | p@chr14:20694798..20694806, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:20694798..20694806, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 1.99e-20 | 3 |
CNS neuron (sensu Vertebrata) | 1.32e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.32e-10 | 23 |
neuron | 1.52e-07 | 33 |
neuronal stem cell | 1.52e-07 | 33 |
neuroblast | 1.52e-07 | 33 |
electrically signaling cell | 1.52e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
ventral horn of spinal cord | 1.99e-20 | 3 |
regional part of spinal cord | 1.08e-12 | 5 |
gray matter of spinal cord | 1.08e-12 | 5 |
corpus striatum | 1.62e-12 | 5 |
striatum | 1.62e-12 | 5 |
ventral part of telencephalon | 1.62e-12 | 5 |
future corpus striatum | 1.62e-12 | 5 |
gray matter | 3.54e-11 | 34 |
spinal cord | 9.54e-11 | 6 |
dorsal region element | 9.54e-11 | 6 |
dorsum | 9.54e-11 | 6 |
basal ganglion | 3.41e-08 | 8 |
nuclear complex of neuraxis | 3.41e-08 | 8 |
aggregate regional part of brain | 3.41e-08 | 8 |
collection of basal ganglia | 3.41e-08 | 8 |
cerebral subcortex | 3.41e-08 | 8 |
central nervous system | 1.48e-07 | 73 |
neural tube | 1.94e-07 | 52 |
neural rod | 1.94e-07 | 52 |
future spinal cord | 1.94e-07 | 52 |
neural keel | 1.94e-07 | 52 |
nervous system | 2.31e-07 | 75 |
regional part of nervous system | 3.56e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.