FFCP PHASE1:Hg19::chr4:129208940..129208976,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10424 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16089 | |||
|TSSclassifier=S | |||
|UniProt=Q8NB07 | |||
|association_with_transcript=0bp_to_ENST00000332709,uc003igg.2_5end | |||
|description=CAGE_peak_1_at_PGRMC2_5end | |||
|id=chr4:129208940..129208976,- | |||
|ontology_enrichment_celltype=CL:0000055!6.90e-20!180;CL:0000057!6.71e-15!75;CL:0000183!6.23e-07!59;CL:0000222!6.54e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000349;7.47e-08;19!CL:0000136;3.56e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.14e-15,76;CL:0000349,7.48e-08,19;CL:0000222,3.92e-07,121;CL:0000192,4.46e-07,43;CL:0000514,4.46e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.40e-15!365;UBERON:0000477!6.69e-15!286;UBERON:0000481!9.78e-15!347;UBERON:0005256!7.34e-13!143;UBERON:0003914!8.45e-11!118;UBERON:0004111!1.14e-10!241;UBERON:0002100!3.04e-10!216;UBERON:0000119!3.21e-10!312;UBERON:0000483!5.53e-10!309;UBERON:0003104!1.38e-09!238;UBERON:0009142!1.38e-09!238;UBERON:0000468!2.45e-09!659;UBERON:0004923!5.31e-09!57;UBERON:0005631!1.88e-08!14;UBERON:0000158!1.88e-08!14;UBERON:0004872!3.99e-08!84;UBERON:0003102!1.88e-07!95;UBERON:0000490!2.29e-07!138;UBERON:0000064!3.19e-07!219;UBERON:0002049!3.76e-07!79;UBERON:0007798!3.76e-07!79;UBERON:0000914!4.81e-07!83;UBERON:0002329!4.81e-07!83;UBERON:0003077!4.81e-07!83;UBERON:0003059!4.81e-07!83;UBERON:0007282!4.81e-07!83;UBERON:0009618!4.81e-07!83;UBERON:0007285!4.81e-07!83;UBERON:0000025!6.08e-07!194;UBERON:0004119!9.43e-07!169;UBERON:0000925!9.43e-07!169;UBERON:0006595!9.43e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,5.60e-12,160;UBERON:0009142,5.60e-12,160;UBERON:0000119,1.52e-10,309;UBERON:0003914,2.07e-10,117;UBERON:0004111,2.18e-10,240;UBERON:0000483,2.65e-10,306;UBERON:0005256,7.71e-10,122;UBERON:0002100,9.69e-09,199;UBERON:0004923,1.28e-08,66;UBERON:0005631,1.88e-08,14;UBERON:0000158,1.88e-08,14;UBERON:0000490,4.21e-08,148;UBERON:0004119,6.58e-08,160;UBERON:0000925,6.58e-08,160;UBERON:0006595,6.58e-08,160;UBERON:0004872,9.27e-08,83;UBERON:0003102,1.81e-07,99;UBERON:0002049,8.45e-07,78;UBERON:0007798,8.45e-07,78 | |||
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| |||
|short_description=p1@PGRMC2 | |||
}} |
Revision as of 02:22, 13 September 2013
Short description: | p1@PGRMC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PGRMC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000332709, uc003igg.2_5end |
EntrezGene: | PGRMC2 |
HGNC: | 16089 |
UniProt: | Q8NB07 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.14e-15 | 76 |
extraembryonic cell | 7.48e-08 | 19 |
mesodermal cell | 3.92e-07 | 121 |
smooth muscle cell | 4.46e-07 | 43 |
smooth muscle myoblast | 4.46e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 5.60e-12 | 160 |
entire embryonic mesenchyme | 5.60e-12 | 160 |
cell layer | 1.52e-10 | 309 |
epithelial tube | 2.07e-10 | 117 |
anatomical conduit | 2.18e-10 | 240 |
epithelium | 2.65e-10 | 306 |
trunk mesenchyme | 7.71e-10 | 122 |
trunk | 9.69e-09 | 199 |
organ component layer | 1.28e-08 | 66 |
extraembryonic membrane | 1.88e-08 | 14 |
membranous layer | 1.88e-08 | 14 |
unilaminar epithelium | 4.21e-08 | 148 |
endoderm-derived structure | 6.58e-08 | 160 |
endoderm | 6.58e-08 | 160 |
presumptive endoderm | 6.58e-08 | 160 |
splanchnic layer of lateral plate mesoderm | 9.27e-08 | 83 |
surface structure | 1.81e-07 | 99 |
vasculature | 8.45e-07 | 78 |
vascular system | 8.45e-07 | 78 |
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