FFCP PHASE1:Hg19::chr5:132149179..132149191,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=134548|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=27033|TSSclassifier=W|UniProt=Q2M3V2|association_with_transcript=146bp_to_ENST00000378693,NM_175873,uc003kxw.2_5end|coexpression_cluster_id=C25|description=CAGE_peak_7_at_SOWAHA_5end|id=chr5:132149179..132149191,+|ontology_enrichment_celltype=CL:0002274!1.79e-07!5;CL:0000457!1.79e-07!5;CL:0002191!1.79e-07!5;CL:0000097!1.79e-07!5;CL:0000831!1.79e-07!5;CL:0002028!1.79e-07!5|ontology_enrichment_celltype_v019=CL:0002535;3.24e-12;2|ontology_enrichment_celltype_v019_2=CL:0002535,3.24e-12,2|ontology_enrichment_development_v019=UBERON:0005425;2.62e-23;1!UBERON:0003056;1.12e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.51e-30!57;UBERON:0005068!3.51e-30!57;UBERON:0006241!3.51e-30!57;UBERON:0007135!3.51e-30!57;UBERON:0007023!1.03e-29!115;UBERON:0002780!3.12e-29!41;UBERON:0001890!3.12e-29!41;UBERON:0006240!3.12e-29!41;UBERON:0003080!1.92e-28!42;UBERON:0000073!4.15e-27!94;UBERON:0001016!4.15e-27!94;UBERON:0002616!3.11e-26!59;UBERON:0005743!6.05e-26!86;UBERON:0000955!6.19e-26!69;UBERON:0006238!6.19e-26!69;UBERON:0001017!2.54e-25!82;UBERON:0001893!6.18e-25!34;UBERON:0002791!1.84e-22!33;UBERON:0003075!4.57e-22!86;UBERON:0007284!4.57e-22!86;UBERON:0002020!9.08e-22!34;UBERON:0003528!9.08e-22!34;UBERON:0002346!7.90e-21!90;UBERON:0003056!2.01e-20!61;UBERON:0001869!2.57e-20!32;UBERON:0001950!4.61e-17!20;UBERON:0000153!1.28e-16!129;UBERON:0007811!1.28e-16!129;UBERON:0000033!2.65e-16!123;UBERON:0002619!2.09e-15!22;UBERON:0004121!1.88e-13!169;UBERON:0000956!2.11e-13!25;UBERON:0000203!2.11e-13!25;UBERON:0000924!5.48e-13!173;UBERON:0006601!5.48e-13!173;UBERON:0002420!8.69e-11!9;UBERON:0007245!8.69e-11!9;UBERON:0010009!8.69e-11!9;UBERON:0010011!8.69e-11!9;UBERON:0000454!8.69e-11!9;UBERON:0002308!1.67e-10!9;UBERON:0000125!1.67e-10!9;UBERON:0005162!5.05e-09!2;UBERON:0000122!5.05e-09!2;UBERON:0009663!5.09e-09!7;UBERON:0000062!6.29e-09!511;UBERON:0001871!1.48e-08!7;UBERON:0000025!1.63e-07!194|ontology_enrichment_uberon_v019=UBERON:0002108;1.82e-40;4!UBERON:0000160;8.03e-31;17!UBERON:0005409;3.35e-24;22!UBERON:0000941;2.62e-23;1!UBERON:0001785;2.62e-23;1!UBERON:0002464;2.62e-23;1!UBERON:0004904;2.62e-23;1!UBERON:0001021;2.62e-23;1!UBERON:0004921;8.76e-15;33!UBERON:0003714;2.32e-12;2!UBERON:0005162;2.32e-12;2!UBERON:0000122;2.32e-12;2!UBERON:0006955;3.24e-12;2!UBERON:0004801;3.24e-12;2!UBERON:0001155;9.01e-11;9!UBERON:0000059;5.52e-09;11!UBERON:0000922;8.49e-09;49!UBERON:0002114;1.12e-08;2!UBERON:0001555;4.91e-07;54|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.95e-40,4;UBERON:0000160,8.04e-31,17;UBERON:0000941,2.10e-23,1;UBERON:0001785,2.10e-23,1;UBERON:0002464,2.10e-23,1;UBERON:0004904,2.10e-23,1;UBERON:0001021,2.10e-23,1;UBERON:0003902,2.10e-23,1;UBERON:0005425,2.10e-23,1;UBERON:0005409,1.91e-21,25;UBERON:0003714,2.07e-12,2;UBERON:0005162,2.07e-12,2;UBERON:0000122,2.07e-12,2;UBERON:0006955,3.24e-12,2;UBERON:0004801,3.24e-12,2;UBERON:0001155,8.79e-11,9;UBERON:0000059,5.41e-09,11;UBERON:0002114,1.21e-08,2;UBERON:0001781,7.70e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,1.76352923497993,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18447232212021,1.83309043480088,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0.144090417154106,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0,0,0,0,0,0,0,0,0,0,0,0.242998226632099,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=134548 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27033 | |||
|TSSclassifier=W | |||
|UniProt=Q2M3V2 | |||
|association_with_transcript=146bp_to_ENST00000378693,NM_175873,uc003kxw.2_5end | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_7_at_SOWAHA_5end | |||
|id=chr5:132149179..132149191,+ | |||
|ontology_enrichment_celltype=CL:0002274!1.79e-07!5;CL:0000457!1.79e-07!5;CL:0002191!1.79e-07!5;CL:0000097!1.79e-07!5;CL:0000831!1.79e-07!5;CL:0002028!1.79e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002535;3.24e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,3.24e-12,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.62e-23;1!UBERON:0003056;1.12e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.51e-30!57;UBERON:0005068!3.51e-30!57;UBERON:0006241!3.51e-30!57;UBERON:0007135!3.51e-30!57;UBERON:0007023!1.03e-29!115;UBERON:0002780!3.12e-29!41;UBERON:0001890!3.12e-29!41;UBERON:0006240!3.12e-29!41;UBERON:0003080!1.92e-28!42;UBERON:0000073!4.15e-27!94;UBERON:0001016!4.15e-27!94;UBERON:0002616!3.11e-26!59;UBERON:0005743!6.05e-26!86;UBERON:0000955!6.19e-26!69;UBERON:0006238!6.19e-26!69;UBERON:0001017!2.54e-25!82;UBERON:0001893!6.18e-25!34;UBERON:0002791!1.84e-22!33;UBERON:0003075!4.57e-22!86;UBERON:0007284!4.57e-22!86;UBERON:0002020!9.08e-22!34;UBERON:0003528!9.08e-22!34;UBERON:0002346!7.90e-21!90;UBERON:0003056!2.01e-20!61;UBERON:0001869!2.57e-20!32;UBERON:0001950!4.61e-17!20;UBERON:0000153!1.28e-16!129;UBERON:0007811!1.28e-16!129;UBERON:0000033!2.65e-16!123;UBERON:0002619!2.09e-15!22;UBERON:0004121!1.88e-13!169;UBERON:0000956!2.11e-13!25;UBERON:0000203!2.11e-13!25;UBERON:0000924!5.48e-13!173;UBERON:0006601!5.48e-13!173;UBERON:0002420!8.69e-11!9;UBERON:0007245!8.69e-11!9;UBERON:0010009!8.69e-11!9;UBERON:0010011!8.69e-11!9;UBERON:0000454!8.69e-11!9;UBERON:0002308!1.67e-10!9;UBERON:0000125!1.67e-10!9;UBERON:0005162!5.05e-09!2;UBERON:0000122!5.05e-09!2;UBERON:0009663!5.09e-09!7;UBERON:0000062!6.29e-09!511;UBERON:0001871!1.48e-08!7;UBERON:0000025!1.63e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.82e-40;4!UBERON:0000160;8.03e-31;17!UBERON:0005409;3.35e-24;22!UBERON:0000941;2.62e-23;1!UBERON:0001785;2.62e-23;1!UBERON:0002464;2.62e-23;1!UBERON:0004904;2.62e-23;1!UBERON:0001021;2.62e-23;1!UBERON:0004921;8.76e-15;33!UBERON:0003714;2.32e-12;2!UBERON:0005162;2.32e-12;2!UBERON:0000122;2.32e-12;2!UBERON:0006955;3.24e-12;2!UBERON:0004801;3.24e-12;2!UBERON:0001155;9.01e-11;9!UBERON:0000059;5.52e-09;11!UBERON:0000922;8.49e-09;49!UBERON:0002114;1.12e-08;2!UBERON:0001555;4.91e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.95e-40,4;UBERON:0000160,8.04e-31,17;UBERON:0000941,2.10e-23,1;UBERON:0001785,2.10e-23,1;UBERON:0002464,2.10e-23,1;UBERON:0004904,2.10e-23,1;UBERON:0001021,2.10e-23,1;UBERON:0003902,2.10e-23,1;UBERON:0005425,2.10e-23,1;UBERON:0005409,1.91e-21,25;UBERON:0003714,2.07e-12,2;UBERON:0005162,2.07e-12,2;UBERON:0000122,2.07e-12,2;UBERON:0006955,3.24e-12,2;UBERON:0004801,3.24e-12,2;UBERON:0001155,8.79e-11,9;UBERON:0000059,5.41e-09,11;UBERON:0002114,1.21e-08,2;UBERON:0001781,7.70e-07,4 | |||
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|short_description=p7@SOWAHA | |||
}} |
Revision as of 13:08, 13 September 2013
Short description: | p7@SOWAHA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_SOWAHA_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 146bp_to_ENST00000378693, NM_175873, uc003kxw.2_5end |
EntrezGene: | SOWAHA |
HGNC: | 27033 |
UniProt: | Q2M3V2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 3.24e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
small intestine | 1.95e-40 | 4 |
intestine | 8.04e-31 | 17 |
cranial nerve II | 2.10e-23 | 1 |
cranial nerve | 2.10e-23 | 1 |
nerve trunk | 2.10e-23 | 1 |
nerve connecting eye with brain | 2.10e-23 | 1 |
nerve | 2.10e-23 | 1 |
retinal neural layer | 2.10e-23 | 1 |
presumptive neural retina | 2.10e-23 | 1 |
gastrointestinal system | 1.91e-21 | 25 |
neural tissue | 2.07e-12 | 2 |
multi cell component structure | 2.07e-12 | 2 |
neuron projection bundle | 2.07e-12 | 2 |
uterine epithelium | 3.24e-12 | 2 |
cervix epithelium | 3.24e-12 | 2 |
colon | 8.79e-11 | 9 |
large intestine | 5.41e-09 | 11 |
duodenum | 1.21e-08 | 2 |
layer of retina | 7.70e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.