FFCP PHASE1:Hg19::chr5:98109395..98109407,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=285704 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26896 | |||
|TSSclassifier=S | |||
|UniProt=Q6NW40 | |||
|association_with_transcript=56bp_to_ENST00000513185_5end | |||
|description=CAGE_peak_7_at_RGMB_5end | |||
|id=chr5:98109395..98109407,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.93e-28!180;CL:0000680!6.92e-16!57;CL:0000056!6.92e-16!57;CL:0000355!6.92e-16!57;CL:0000183!1.43e-14!59;CL:0000187!1.56e-14!54;CL:0000192!2.39e-14!42;CL:0000514!2.39e-14!42;CL:0000393!3.80e-14!60;CL:0000211!3.80e-14!60;CL:0000359!6.00e-14!32;CL:0000057!7.86e-13!75;CL:0002620!8.34e-13!23;CL:0000220!2.61e-11!246;CL:0002321!2.96e-11!248;CL:0000222!1.52e-09!119 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.03e-17;23!CL:0000359;1.20e-16;32!CL:0000192;5.06e-12;43!CL:0000187;1.52e-09;55!CL:0002539;3.34e-08;10!CL:0000057;1.30e-07;73!CL:0000393;6.35e-07;61!CL:0000211;6.35e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,6.59e-19,58;CL:0000056,6.59e-19,58;CL:0000355,6.59e-19,58;CL:0000359,1.05e-17,32;CL:0002620,2.52e-17,23;CL:0000187,4.36e-17,55;CL:0000057,2.49e-16,76;CL:0000192,5.86e-16,43;CL:0000514,5.86e-16,43;CL:0000393,1.28e-14,61;CL:0000211,1.28e-14,61;CL:0000222,2.28e-09,121;CL:0002539,2.84e-08,10 | |||
|ontology_enrichment_development_v019=CL:0000514;5.06e-12;43!CL:0000355;3.82e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.65e-25!83;UBERON:0002329!7.65e-25!83;UBERON:0003077!7.65e-25!83;UBERON:0003059!7.65e-25!83;UBERON:0007282!7.65e-25!83;UBERON:0009618!7.65e-25!83;UBERON:0007285!7.65e-25!83;UBERON:0000475!9.08e-24!365;UBERON:0000486!8.34e-22!82;UBERON:0004290!9.70e-22!70;UBERON:0002199!4.19e-18!45;UBERON:0002416!4.19e-18!45;UBERON:0003102!1.59e-17!95;UBERON:0001134!2.26e-17!61;UBERON:0002036!2.26e-17!61;UBERON:0003082!2.26e-17!61;UBERON:0000119!3.52e-17!312;UBERON:0002385!4.51e-17!63;UBERON:0001015!4.51e-17!63;UBERON:0000383!4.51e-17!63;UBERON:0000483!1.30e-16!309;UBERON:0002097!9.80e-16!40;UBERON:0000468!1.07e-14!659;UBERON:0000467!2.19e-14!625;UBERON:0005256!2.74e-14!143;UBERON:0000480!2.75e-14!626;UBERON:0000481!4.54e-14!347;UBERON:0002049!1.56e-13!79;UBERON:0007798!1.56e-13!79;UBERON:0001637!3.97e-13!42;UBERON:0003509!3.97e-13!42;UBERON:0004572!3.97e-13!42;UBERON:0000055!7.33e-13!69;UBERON:0001981!1.23e-12!60;UBERON:0007500!1.23e-12!60;UBERON:0004537!1.23e-12!60;UBERON:0006965!1.23e-12!60;UBERON:0004573!4.22e-11!33;UBERON:0004571!4.22e-11!33;UBERON:0004872!1.04e-09!84;UBERON:0000490!3.63e-09!138;UBERON:0002100!5.42e-09!216;UBERON:0004111!1.71e-08!241;UBERON:0000477!2.80e-08!286;UBERON:0000922!4.41e-08!612;UBERON:0004121!1.17e-07!169;UBERON:0000923!1.24e-07!604;UBERON:0005291!1.24e-07!604;UBERON:0006598!1.24e-07!604;UBERON:0002532!1.24e-07!604;UBERON:0002050!1.29e-07!605;UBERON:0005423!1.29e-07!605;UBERON:0004535!1.62e-07!110;UBERON:0000924!3.05e-07!173;UBERON:0006601!3.05e-07!173;UBERON:0001009!6.09e-07!113;UBERON:0003104!1.00e-06!238;UBERON:0009142!1.00e-06!238 | |||
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| |||
|short_description=p7@RGMB | |||
}} |
Revision as of 17:03, 13 September 2013
Short description: | p7@RGMB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_RGMB_5end |
Coexpression cluster: | NA |
Association with transcript: | 56bp_to_ENST00000513185_5end |
EntrezGene: | RGMB |
HGNC: | 26896 |
UniProt: | Q6NW40 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 6.59e-19 | 58 |
myoblast | 6.59e-19 | 58 |
multi-potent skeletal muscle stem cell | 6.59e-19 | 58 |
vascular associated smooth muscle cell | 1.05e-17 | 32 |
skin fibroblast | 2.52e-17 | 23 |
muscle cell | 4.36e-17 | 55 |
fibroblast | 2.49e-16 | 76 |
smooth muscle cell | 5.86e-16 | 43 |
smooth muscle myoblast | 5.86e-16 | 43 |
electrically responsive cell | 1.28e-14 | 61 |
electrically active cell | 1.28e-14 | 61 |
mesodermal cell | 2.28e-09 | 121 |
aortic smooth muscle cell | 2.84e-08 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.