FFCP PHASE1:Hg19::chr6:136359549..136359565,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=120bp_to_AB384352_5end|coexpression_cluster_id=C328|description=CAGE_peak_2_at_AB384352_5end|id=chr6:136359549..136359565,+|ontology_enrichment_celltype=CL:0002139!9.84e-17!24;CL:0000071!1.65e-11!18;CL:0002546!1.65e-11!18;CL:0000115!2.57e-11!35;CL:0000222!6.16e-11!119;CL:0002078!3.81e-10!44;CL:0000359!6.05e-09!32;CL:1000413!9.48e-09!9;CL:0000213!3.46e-08!57;CL:0000215!3.46e-08!57;CL:0002543!2.04e-07!6;CL:0002494!2.05e-07!16;CL:0005020!5.59e-07!6;CL:0002138!5.59e-07!6;CL:0005022!5.59e-07!6|ontology_enrichment_celltype_v019=CL:0002618;3.57e-46;3!CL:0002139;3.58e-40;24!CL:0000115;9.31e-28;36!CL:0002138;4.91e-24;6!CL:0002543;1.69e-23;6!CL:0000071;3.75e-21;18!CL:0000213;5.83e-17;58!CL:0000215;5.83e-17;58!CL:0002078;5.50e-15;45!CL:1000413;1.09e-07;9|ontology_enrichment_celltype_v019_2=CL:0002618,3.06e-46,3;CL:0002139,3.77e-40,24;CL:0000115,1.49e-33,36;CL:0002078,1.02e-26,45;CL:0005020,4.91e-24,6;CL:0002138,4.91e-24,6;CL:0005022,4.91e-24,6;CL:0002543,1.57e-23,6;CL:0000071,3.92e-21,18;CL:0002546,3.92e-21,18;CL:0000213,1.40e-20,58;CL:0000215,1.40e-20,58;CL:0000222,1.06e-11,121;CL:1000413,1.17e-07,9|ontology_enrichment_development_v019=CL:0005022;4.91e-24;6!CL:0002546;3.75e-21;18!UBERON:0010227;1.65e-16;1!UBERON:0010122;6.42e-09;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001009!9.77e-28!113;UBERON:0004535!2.41e-26!110;UBERON:0002049!2.54e-26!79;UBERON:0007798!2.54e-26!79;UBERON:0000055!5.62e-21!69;UBERON:0004872!8.52e-21!84;UBERON:0000477!3.01e-20!286;UBERON:0004111!6.19e-18!241;UBERON:0001981!7.47e-18!60;UBERON:0007500!7.47e-18!60;UBERON:0004537!7.47e-18!60;UBERON:0006965!7.47e-18!60;UBERON:0003914!8.72e-17!118;UBERON:0000025!9.79e-16!194;UBERON:0000119!1.01e-13!312;UBERON:0001637!3.62e-13!42;UBERON:0003509!3.62e-13!42;UBERON:0004572!3.62e-13!42;UBERON:0000483!8.34e-13!309;UBERON:0001986!1.65e-11!18;UBERON:0004638!1.65e-11!18;UBERON:0004852!1.65e-11!18;UBERON:0007100!1.09e-10!27;UBERON:0006914!3.36e-10!25;UBERON:0007023!1.75e-09!115;UBERON:0000948!2.28e-09!24;UBERON:0005498!2.28e-09!24;UBERON:0004140!2.28e-09!24;UBERON:0009881!2.28e-09!24;UBERON:0004141!2.28e-09!24;UBERON:0003084!2.28e-09!24;UBERON:0007005!2.28e-09!24;UBERON:0004139!2.28e-09!24;UBERON:0004291!2.28e-09!24;UBERON:0004573!6.27e-09!33;UBERON:0004571!6.27e-09!33;UBERON:0000487!8.51e-09!22;UBERON:0003915!9.48e-09!9;UBERON:0004700!9.48e-09!9;UBERON:0001917!9.48e-09!9;UBERON:0009663!3.36e-08!7;UBERON:0000490!3.52e-08!138;UBERON:0002308!5.95e-08!9;UBERON:0000125!5.95e-08!9;UBERON:0000467!9.77e-08!625;UBERON:0000480!1.12e-07!626;UBERON:0000369!1.45e-07!4;UBERON:0002435!1.45e-07!4;UBERON:0000204!1.45e-07!4;UBERON:0010082!1.45e-07!4;UBERON:0000468!1.60e-07!659|ontology_enrichment_uberon_v019=UBERON:0002066;4.83e-28;5!UBERON:0004638;3.75e-21;18!UBERON:0001986;3.75e-21;18!UBERON:0004852;3.75e-21;18!UBERON:0001473;3.31e-18;8!UBERON:0004536;3.31e-18;8!UBERON:0006558;3.31e-18;8!UBERON:0000487;2.50e-17;22!UBERON:0002079;1.65e-16;1!UBERON:0000996;1.65e-16;1!UBERON:0001638;6.66e-16;9!UBERON:0010260;6.66e-16;9!UBERON:0003920;6.66e-16;9!UBERON:0004582;6.66e-16;9!UBERON:0006914;2.93e-15;25!UBERON:0002465;1.07e-14;10!UBERON:0000055;1.25e-11;65!UBERON:0000490;1.02e-09;33!UBERON:0001873;6.42e-09;2!UBERON:0002081;6.42e-09;2!UBERON:0007500;4.62e-08;56!UBERON:0001981;4.62e-08;56!UBERON:0004537;4.62e-08;56!UBERON:0003915;1.09e-07;9!UBERON:0004700;1.09e-07;9!UBERON:0001917;1.09e-07;9!UBERON:0002049;3.32e-07;75!UBERON:0007798;3.32e-07;75!UBERON:0004535;5.56e-07;109|ontology_enrichment_uberon_v019_2=UBERON:0002066,4.41e-28,5;UBERON:0004638,3.92e-21,18;UBERON:0001986,3.92e-21,18;UBERON:0004852,3.92e-21,18;UBERON:0001473,3.31e-18,8;UBERON:0004536,3.31e-18,8;UBERON:0006558,3.31e-18,8;UBERON:0000055,1.94e-17,68;UBERON:0000487,2.59e-17,22;UBERON:0002079,1.04e-16,1;UBERON:0000996,1.41e-16,1;UBERON:0001638,6.33e-16,9;UBERON:0010260,6.33e-16,9;UBERON:0003920,6.33e-16,9;UBERON:0004582,6.33e-16,9;UBERON:0006914,3.02e-15,25;UBERON:0002049,4.16e-15,78;UBERON:0007798,4.16e-15,78;UBERON:0002465,1.07e-14,10;UBERON:0004535,3.94e-13,109;UBERON:0001009,9.38e-13,112;UBERON:0004111,1.33e-09,240;UBERON:0001873,4.70e-09,2;UBERON:0010122,4.70e-09,2;UBERON:0007500,4.98e-09,59;UBERON:0001981,4.98e-09,59;UBERON:0004537,4.98e-09,59;UBERON:0006965,4.98e-09,59;UBERON:0002081,5.08e-09,2;UBERON:0010227,5.08e-09,2;UBERON:0004872,1.61e-08,83;UBERON:0003915,1.17e-07,9;UBERON:0004700,1.17e-07,9;UBERON:0001917,1.17e-07,9;UBERON:0003914,1.21e-07,117|phase1_expression=0.181678379270557,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=120bp_to_AB384352_5end | |||
|coexpression_cluster_id=C328 | |||
|description=CAGE_peak_2_at_AB384352_5end | |||
|id=chr6:136359549..136359565,+ | |||
|ontology_enrichment_celltype=CL:0002139!9.84e-17!24;CL:0000071!1.65e-11!18;CL:0002546!1.65e-11!18;CL:0000115!2.57e-11!35;CL:0000222!6.16e-11!119;CL:0002078!3.81e-10!44;CL:0000359!6.05e-09!32;CL:1000413!9.48e-09!9;CL:0000213!3.46e-08!57;CL:0000215!3.46e-08!57;CL:0002543!2.04e-07!6;CL:0002494!2.05e-07!16;CL:0005020!5.59e-07!6;CL:0002138!5.59e-07!6;CL:0005022!5.59e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002618;3.57e-46;3!CL:0002139;3.58e-40;24!CL:0000115;9.31e-28;36!CL:0002138;4.91e-24;6!CL:0002543;1.69e-23;6!CL:0000071;3.75e-21;18!CL:0000213;5.83e-17;58!CL:0000215;5.83e-17;58!CL:0002078;5.50e-15;45!CL:1000413;1.09e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002618,3.06e-46,3;CL:0002139,3.77e-40,24;CL:0000115,1.49e-33,36;CL:0002078,1.02e-26,45;CL:0005020,4.91e-24,6;CL:0002138,4.91e-24,6;CL:0005022,4.91e-24,6;CL:0002543,1.57e-23,6;CL:0000071,3.92e-21,18;CL:0002546,3.92e-21,18;CL:0000213,1.40e-20,58;CL:0000215,1.40e-20,58;CL:0000222,1.06e-11,121;CL:1000413,1.17e-07,9 | |||
|ontology_enrichment_development_v019=CL:0005022;4.91e-24;6!CL:0002546;3.75e-21;18!UBERON:0010227;1.65e-16;1!UBERON:0010122;6.42e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!9.77e-28!113;UBERON:0004535!2.41e-26!110;UBERON:0002049!2.54e-26!79;UBERON:0007798!2.54e-26!79;UBERON:0000055!5.62e-21!69;UBERON:0004872!8.52e-21!84;UBERON:0000477!3.01e-20!286;UBERON:0004111!6.19e-18!241;UBERON:0001981!7.47e-18!60;UBERON:0007500!7.47e-18!60;UBERON:0004537!7.47e-18!60;UBERON:0006965!7.47e-18!60;UBERON:0003914!8.72e-17!118;UBERON:0000025!9.79e-16!194;UBERON:0000119!1.01e-13!312;UBERON:0001637!3.62e-13!42;UBERON:0003509!3.62e-13!42;UBERON:0004572!3.62e-13!42;UBERON:0000483!8.34e-13!309;UBERON:0001986!1.65e-11!18;UBERON:0004638!1.65e-11!18;UBERON:0004852!1.65e-11!18;UBERON:0007100!1.09e-10!27;UBERON:0006914!3.36e-10!25;UBERON:0007023!1.75e-09!115;UBERON:0000948!2.28e-09!24;UBERON:0005498!2.28e-09!24;UBERON:0004140!2.28e-09!24;UBERON:0009881!2.28e-09!24;UBERON:0004141!2.28e-09!24;UBERON:0003084!2.28e-09!24;UBERON:0007005!2.28e-09!24;UBERON:0004139!2.28e-09!24;UBERON:0004291!2.28e-09!24;UBERON:0004573!6.27e-09!33;UBERON:0004571!6.27e-09!33;UBERON:0000487!8.51e-09!22;UBERON:0003915!9.48e-09!9;UBERON:0004700!9.48e-09!9;UBERON:0001917!9.48e-09!9;UBERON:0009663!3.36e-08!7;UBERON:0000490!3.52e-08!138;UBERON:0002308!5.95e-08!9;UBERON:0000125!5.95e-08!9;UBERON:0000467!9.77e-08!625;UBERON:0000480!1.12e-07!626;UBERON:0000369!1.45e-07!4;UBERON:0002435!1.45e-07!4;UBERON:0000204!1.45e-07!4;UBERON:0010082!1.45e-07!4;UBERON:0000468!1.60e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002066;4.83e-28;5!UBERON:0004638;3.75e-21;18!UBERON:0001986;3.75e-21;18!UBERON:0004852;3.75e-21;18!UBERON:0001473;3.31e-18;8!UBERON:0004536;3.31e-18;8!UBERON:0006558;3.31e-18;8!UBERON:0000487;2.50e-17;22!UBERON:0002079;1.65e-16;1!UBERON:0000996;1.65e-16;1!UBERON:0001638;6.66e-16;9!UBERON:0010260;6.66e-16;9!UBERON:0003920;6.66e-16;9!UBERON:0004582;6.66e-16;9!UBERON:0006914;2.93e-15;25!UBERON:0002465;1.07e-14;10!UBERON:0000055;1.25e-11;65!UBERON:0000490;1.02e-09;33!UBERON:0001873;6.42e-09;2!UBERON:0002081;6.42e-09;2!UBERON:0007500;4.62e-08;56!UBERON:0001981;4.62e-08;56!UBERON:0004537;4.62e-08;56!UBERON:0003915;1.09e-07;9!UBERON:0004700;1.09e-07;9!UBERON:0001917;1.09e-07;9!UBERON:0002049;3.32e-07;75!UBERON:0007798;3.32e-07;75!UBERON:0004535;5.56e-07;109 | |||
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|phase1_expression=0.181678379270557,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,0.130979075497713,0,0,0,0,0,0,0,0,1.19257444420023,0,0.694281003215189,0.56530794192401,0.419499436209906,0.550236083880135,1.25396979922086,6.20200222006389,4.62496141492723,4.35136796594071,0,0,0,0.367663080345869,0,2.23249320710199,1.34717623575702,1.23872628531654,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0,0,0.709336764396714,0,0,0.24666754841716,0.933633106199299,0.134710672069688,0.653847612453835,0.908144565869588,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0.600952235626387,0.453728732640084,0.179389635688862,0,0.211931901159562,0,0,0,0,0,0,0.252433774244115,0,0.161646056818812,0,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.66004457238855,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.229628896329213,0,0,0,0,0,0,0,1.13733384070897,0.850468526382578,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0.464845549297286,0,0,0.308033580176089,0.532306030317022,0.869932992075073,0.18532421910392,0,0.744316738719335,0.316379424718726,0,0,0,0.636406495851874,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,1.10273068709225,0.66343897524122,0.438450885253763,0,0,0,0.30982349809975,0.281695602532241,0.286822704408103,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,1.5677537021303,0,0,0,0,0,0,0.153900517007594,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0.279282401272254,0,0.717873024576814,0.199679000498991,0,0.446342914883745,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.157611414598396,0.0524545881349981,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.754703705257725,0,0.457680136793847,0.151230923763239,0.15543720058278,0.591420599958536,0,0,0,0,0,0,0.450772826991655,0,0,0.363697318405119,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0.431299245586727,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526472298444801,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0.227662191351298,0,0,0,0.0679697329768317,0,0,0,0.156986185701028,0.785577949580009,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0.103432995861895,0,0.23806443146374,0,0,0,0.445530107947154,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0.366724332548599,0.406896178315738,1.33151354837103,0,0 | |||
|short_description=p2@AB384352 | |||
}} |
Revision as of 18:10, 13 September 2013
Short description: | p2@AB384352 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_AB384352_5end |
Coexpression cluster: | C328_Endothelial_Lymphatic_Renal_Hepatic_chronic_extraskeletal_adipose |
Association with transcript: | 120bp_to_AB384352_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of umbilical vein | 3.06e-46 | 3 |
endothelial cell of vascular tree | 3.77e-40 | 24 |
endothelial cell | 1.49e-33 | 36 |
meso-epithelial cell | 1.02e-26 | 45 |
lymphangioblast | 4.91e-24 | 6 |
endothelial cell of lymphatic vessel | 4.91e-24 | 6 |
vascular lymphangioblast | 4.91e-24 | 6 |
vein endothelial cell | 1.57e-23 | 6 |
blood vessel endothelial cell | 3.92e-21 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.92e-21 | 18 |
lining cell | 1.40e-20 | 58 |
barrier cell | 1.40e-20 | 58 |
mesodermal cell | 1.06e-11 | 121 |
endothelial cell of artery | 1.17e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.