FFCP PHASE1:Hg19::chr6:151186801..151186905,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=25902 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21055 | |||
|TSSclassifier=S | |||
|UniProt=B7ZM99,Q6UB35 | |||
|association_with_transcript=0bp_to_NM_001242767,NM_001242769,NM_015440_5end | |||
|description=CAGE_peak_1_at_MTHFD1L_5end | |||
|id=chr6:151186801..151186905,+ | |||
|ontology_enrichment_celltype=CL:0000012!6.04e-30!682;CL:0000548!7.21e-30!679;CL:0000004!7.21e-30!679;CL:0000255!7.21e-30!679;CL:0000144!1.02e-18!625;CL:0000066!2.50e-18!254;CL:0002321!3.89e-18!248;CL:0000220!9.96e-18!246;CL:0000055!5.50e-17!180;CL:0000003!1.06e-16!722;CL:0002371!4.16e-14!591;CL:0000222!2.30e-13!119;CL:0000063!1.92e-12!578;CL:0000359!4.90e-10!32;CL:0000192!6.85e-09!42;CL:0000514!6.85e-09!42;CL:0000187!2.09e-08!54;CL:0000183!3.35e-08!59;CL:0000071!4.83e-08!18;CL:0002546!4.83e-08!18;CL:0000393!6.56e-08!60;CL:0000211!6.56e-08!60;CL:0002078!9.20e-08!44;CL:0000680!1.55e-07!57;CL:0000056!1.55e-07!57;CL:0000355!1.55e-07!57;CL:0002139!1.92e-07!24;CL:0000076!5.76e-07!62;CL:0000115!5.94e-07!35;CL:0000057!8.09e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.00e-09;32!CL:0000071;5.25e-08;18!CL:0002139;2.17e-07;24!CL:0000192;4.40e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.00e-18,250;CL:0000066,2.98e-18,253;CL:0000222,1.35e-13,121;CL:0000359,4.89e-10,32;CL:0000192,7.33e-09,43;CL:0000514,7.33e-09,43;CL:0000187,2.10e-08,55;CL:0000071,4.83e-08,18;CL:0002546,4.83e-08,18;CL:0002078,5.76e-08,45;CL:0000393,6.45e-08,61;CL:0000211,6.45e-08,61;CL:0000680,1.52e-07,58;CL:0000056,1.52e-07,58;CL:0000355,1.52e-07,58;CL:0002139,1.92e-07,24;CL:0000057,3.49e-07,76;CL:0000115,3.72e-07,36 | |||
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|ontology_enrichment_disease=DOID:162!9.43e-12!235;DOID:14566!1.72e-11!239 | |||
|ontology_enrichment_disease_v019= | |||
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| |||
|short_description=p1@MTHFD1L | |||
}} |
Revision as of 18:45, 13 September 2013
Short description: | p1@MTHFD1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MTHFD1L_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001242767, NM_001242769, NM_015440_5end |
EntrezGene: | MTHFD1L |
HGNC: | 21055 |
UniProt: | B7ZM99Q6UB35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.00e-18 | 250 |
epithelial cell | 2.98e-18 | 253 |
mesodermal cell | 1.35e-13 | 121 |
vascular associated smooth muscle cell | 4.89e-10 | 32 |
smooth muscle cell | 7.33e-09 | 43 |
smooth muscle myoblast | 7.33e-09 | 43 |
muscle cell | 2.10e-08 | 55 |
blood vessel endothelial cell | 4.83e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.83e-08 | 18 |
meso-epithelial cell | 5.76e-08 | 45 |
electrically responsive cell | 6.45e-08 | 61 |
electrically active cell | 6.45e-08 | 61 |
muscle precursor cell | 1.52e-07 | 58 |
myoblast | 1.52e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.52e-07 | 58 |
endothelial cell of vascular tree | 1.92e-07 | 24 |
fibroblast | 3.49e-07 | 76 |
endothelial cell | 3.72e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
epithelial tube open at both ends | 2.32e-18 | 59 |
blood vessel | 2.32e-18 | 59 |
blood vasculature | 2.32e-18 | 59 |
vascular cord | 2.32e-18 | 59 |
vessel | 4.92e-18 | 68 |
epithelial tube | 3.82e-17 | 117 |
splanchnic layer of lateral plate mesoderm | 5.84e-17 | 83 |
artery | 2.28e-16 | 42 |
arterial blood vessel | 2.28e-16 | 42 |
arterial system | 2.28e-16 | 42 |
vasculature | 3.29e-16 | 78 |
vascular system | 3.29e-16 | 78 |
systemic artery | 1.32e-11 | 33 |
systemic arterial system | 1.32e-11 | 33 |
unilaminar epithelium | 1.36e-10 | 148 |
cardiovascular system | 1.08e-09 | 109 |
trunk | 2.74e-09 | 199 |
circulatory system | 1.21e-08 | 112 |
simple squamous epithelium | 1.91e-08 | 22 |
squamous epithelium | 4.11e-08 | 25 |
epithelial vesicle | 4.30e-08 | 78 |
blood vessel endothelium | 4.83e-08 | 18 |
endothelium | 4.83e-08 | 18 |
cardiovascular system endothelium | 4.83e-08 | 18 |
mesenchyme | 3.28e-07 | 160 |
entire embryonic mesenchyme | 3.28e-07 | 160 |
multilaminar epithelium | 5.26e-07 | 83 |
somite | 8.71e-07 | 71 |
presomitic mesoderm | 8.71e-07 | 71 |
presumptive segmental plate | 8.71e-07 | 71 |
dermomyotome | 8.71e-07 | 71 |
trunk paraxial mesoderm | 8.71e-07 | 71 |
dense mesenchyme tissue | 9.06e-07 | 73 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.41e-12 | 235 |
disease of cellular proliferation | 1.71e-11 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.