FFCP PHASE1:Mm9::chr1:158135128..158135162,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=329274|HGNC=|MCL_coexpression_id=927|UniProt=Q8CAA5,A9ZNB6|association_with_transcript=0bp_to_ENSMUST00000015628,NM_177838,uc007dce.1_5end|description=CAGE_peak_1_at_Fam163a_5end|id=chr1:158135128..158135162,-|ontology_enrichment_celltype=CL:0000540!3.15e-10!33;CL:0000047!3.15e-10!33;CL:0000031!3.15e-10!33;CL:0000404!3.15e-10!33;CL:0000107!2.14e-07!9;CL:0000393!4.19e-07!39;CL:0000211!4.19e-07!39|ontology_enrichment_celltype_v019_2=CL:0000540,1.77e-11,33;CL:0000047,1.77e-11,33;CL:0000031,1.77e-11,33;CL:0000404,1.77e-11,33;CL:0000107,1.38e-09,9;CL:0000393,2.37e-08,39;CL:0000211,2.37e-08,39;CL:0002319,8.14e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!7.79e-16!71;UBERON:0003075!7.79e-16!71;UBERON:0007284!7.79e-16!71;UBERON:0004121!1.01e-14!102;UBERON:0000924!1.01e-14!102;UBERON:0006601!1.01e-14!102;UBERON:0001017!2.49e-13!73;UBERON:0005743!2.49e-13!73;UBERON:0000073!3.49e-12!75;UBERON:0001016!3.49e-12!75;UBERON:0000033!8.88e-10!63;UBERON:0003056!7.59e-09!49;UBERON:0000468!9.19e-09!333;UBERON:0002020!8.83e-08!34;UBERON:0002342!1.08e-07!10;UBERON:0005062!1.08e-07!10;UBERON:0001049!2.10e-07!52;UBERON:0005068!2.10e-07!52;UBERON:0006241!2.10e-07!52;UBERON:0007135!2.10e-07!52;UBERON:0002410!2.14e-07!9;UBERON:0000955!2.64e-07!50;UBERON:0006238!2.64e-07!50;UBERON:0000922!2.68e-07!328;UBERON:0002616!8.17e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.96e-15,73;UBERON:0010314,2.11e-15,92;UBERON:0001016,1.44e-14,75;UBERON:0004121,1.77e-14,95;UBERON:0000924,1.77e-14,95;UBERON:0006601,1.77e-14,95;UBERON:0002346,3.08e-13,64;UBERON:0003075,3.08e-13,64;UBERON:0007284,3.08e-13,64;UBERON:0010371,7.43e-10,73;UBERON:0002410,1.38e-09,9;UBERON:0002020,4.08e-09,34;UBERON:0003056,7.97e-09,49;UBERON:0000073,8.92e-09,54;UBERON:0002021,2.14e-08,10;UBERON:0000411,2.14e-08,10;UBERON:0001950,2.14e-08,10;UBERON:0001049,1.88e-07,52;UBERON:0005068,1.88e-07,52;UBERON:0006241,1.88e-07,52;UBERON:0007135,1.88e-07,52;UBERON:0000010,3.19e-07,11;UBERON:0002369,3.83e-07,7;UBERON:0006858,3.83e-07,7;UBERON:0003528,8.67e-07,29;UBERON:0002791,8.67e-07,29;UBERON:0001893,8.67e-07,29|phase1_expression=0.640595388419176,0,0,0,0,0.671517087647559,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0,0,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,3.23706337375356,3.1739458756322,3.1691570175309,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.420649922702764,5.71301968807607,3.53389665522582,0.244981598429908,0.287536413054709,0,7.70811166995721,9.44886301830389,9.21639199537461,0.791317726381163,1.46380229763855,1.04182674111352,7.2587579740359,2.8138130501584,4.73674568108111,2.94628585473668,2.70506193518296,2.05039390407831,0,0,1.15945795480671,0,0,0,0.649776417447669,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,13.3597925158342,10.0621489524359,10.3518262626128,5.30415643688935,7.83757730873637,7.52567725668511,5.27799683584637,0,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,0.878342391034642,0,0.766371165625774,0,0,0,2.84602214869163,8.23501085073528,0.502617408451458,6.95297280769106,6.64860189058859,9.76603809429932,6.81413304884582,0.203678727700633,0,0,1.05220927943237,1.82168620147785,4.36813998423599,3.78130472591233,2.71268672104287,4.42237244483631,2.43416068541215,1.68663104207512,6.98499100995342,0.431135985865684,0.756424320671277,2.28736461413134,0.43839146485515,0.556094498451196,0.348252166522167,0.205782136407943,0,0,0,0,2.07125772535502,2.57978665979206,1.62055855314913,1.42046841351126,1.18058539048442,0.925602677324269,1.16266972375204,1.3413670069981,1.75148013550754,0.987359099480883,0.492502392237286,0.324275238183423,0.146199987425332,0.439100230582101,0.402619256281115,11.565947171027,14.6124549578584,0,0.264450566663544,1.70630600428187,3.71578674976702,5.02583099156164,2.42020229548011,2.2237804384487,2.09248188723815,0,1.81168850196412,2.01068167040216,1.1937388322469,0.779856348476481,0.898819408654221,0.432276099749388,0.796565093017469,0.758671603812327,1.37098215131675,0,0.203651327845314,0.193952487167626,1.05203729835478,1.70738650235495,6.6424566590821,8.00693511991011,6.04646103216823,0,0.333690211432188,0.589676985339609,0,0,0.241177159752417,0,0,0,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0.179397413521912,0,0,0.757965647081939,0.814824882210129,0.848725428875941,0.469380496577004,0.167506257441816,0.476087281772027,0.390267295715598,0.945810864637146,0.8858587585951,2.23236676120482,0.81931657357869,1.03610989119537,0.289298117163023,0,0,0,0,7.54587772942622,5.74337264301796,0,0,11.6738041184015,13.2749173060857,27.3587715120655,6.4521575447189,8.02075226696619,7.07691326972081,16.5972387686707,25.1340037803728,26.4842811224171,17.3513510867776,0.851640511249612,0.35613120733451,0.162886959353576,0.164970122972535,0,0.728341908464944,0.906970670894253,0.943025398779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| ||
|EntrezGene=329274 | |||
|HGNC= | |||
|MCL_coexpression_id=927 | |||
|UniProt=Q8CAA5,A9ZNB6 | |||
|association_with_transcript=0bp_to_ENSMUST00000015628,NM_177838,uc007dce.1_5end | |||
|description=CAGE_peak_1_at_Fam163a_5end | |||
|id=chr1:158135128..158135162,- | |||
|ontology_enrichment_celltype=CL:0000540!3.15e-10!33;CL:0000047!3.15e-10!33;CL:0000031!3.15e-10!33;CL:0000404!3.15e-10!33;CL:0000107!2.14e-07!9;CL:0000393!4.19e-07!39;CL:0000211!4.19e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.77e-11,33;CL:0000047,1.77e-11,33;CL:0000031,1.77e-11,33;CL:0000404,1.77e-11,33;CL:0000107,1.38e-09,9;CL:0000393,2.37e-08,39;CL:0000211,2.37e-08,39;CL:0002319,8.14e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!7.79e-16!71;UBERON:0003075!7.79e-16!71;UBERON:0007284!7.79e-16!71;UBERON:0004121!1.01e-14!102;UBERON:0000924!1.01e-14!102;UBERON:0006601!1.01e-14!102;UBERON:0001017!2.49e-13!73;UBERON:0005743!2.49e-13!73;UBERON:0000073!3.49e-12!75;UBERON:0001016!3.49e-12!75;UBERON:0000033!8.88e-10!63;UBERON:0003056!7.59e-09!49;UBERON:0000468!9.19e-09!333;UBERON:0002020!8.83e-08!34;UBERON:0002342!1.08e-07!10;UBERON:0005062!1.08e-07!10;UBERON:0001049!2.10e-07!52;UBERON:0005068!2.10e-07!52;UBERON:0006241!2.10e-07!52;UBERON:0007135!2.10e-07!52;UBERON:0002410!2.14e-07!9;UBERON:0000955!2.64e-07!50;UBERON:0006238!2.64e-07!50;UBERON:0000922!2.68e-07!328;UBERON:0002616!8.17e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.96e-15,73;UBERON:0010314,2.11e-15,92;UBERON:0001016,1.44e-14,75;UBERON:0004121,1.77e-14,95;UBERON:0000924,1.77e-14,95;UBERON:0006601,1.77e-14,95;UBERON:0002346,3.08e-13,64;UBERON:0003075,3.08e-13,64;UBERON:0007284,3.08e-13,64;UBERON:0010371,7.43e-10,73;UBERON:0002410,1.38e-09,9;UBERON:0002020,4.08e-09,34;UBERON:0003056,7.97e-09,49;UBERON:0000073,8.92e-09,54;UBERON:0002021,2.14e-08,10;UBERON:0000411,2.14e-08,10;UBERON:0001950,2.14e-08,10;UBERON:0001049,1.88e-07,52;UBERON:0005068,1.88e-07,52;UBERON:0006241,1.88e-07,52;UBERON:0007135,1.88e-07,52;UBERON:0000010,3.19e-07,11;UBERON:0002369,3.83e-07,7;UBERON:0006858,3.83e-07,7;UBERON:0003528,8.67e-07,29;UBERON:0002791,8.67e-07,29;UBERON:0001893,8.67e-07,29 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0.671517087647559,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0,0,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,3.23706337375356,3.1739458756322,3.1691570175309,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.420649922702764,5.71301968807607,3.53389665522582,0.244981598429908,0.287536413054709,0,7.70811166995721,9.44886301830389,9.21639199537461,0.791317726381163,1.46380229763855,1.04182674111352,7.2587579740359,2.8138130501584,4.73674568108111,2.94628585473668,2.70506193518296,2.05039390407831,0,0,1.15945795480671,0,0,0,0.649776417447669,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,13.3597925158342,10.0621489524359,10.3518262626128,5.30415643688935,7.83757730873637,7.52567725668511,5.27799683584637,0,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,0.878342391034642,0,0.766371165625774,0,0,0,2.84602214869163,8.23501085073528,0.502617408451458,6.95297280769106,6.64860189058859,9.76603809429932,6.81413304884582,0.203678727700633,0,0,1.05220927943237,1.82168620147785,4.36813998423599,3.78130472591233,2.71268672104287,4.42237244483631,2.43416068541215,1.68663104207512,6.98499100995342,0.431135985865684,0.756424320671277,2.28736461413134,0.43839146485515,0.556094498451196,0.348252166522167,0.205782136407943,0,0,0,0,2.07125772535502,2.57978665979206,1.62055855314913,1.42046841351126,1.18058539048442,0.925602677324269,1.16266972375204,1.3413670069981,1.75148013550754,0.987359099480883,0.492502392237286,0.324275238183423,0.146199987425332,0.439100230582101,0.402619256281115,11.565947171027,14.6124549578584,0,0.264450566663544,1.70630600428187,3.71578674976702,5.02583099156164,2.42020229548011,2.2237804384487,2.09248188723815,0,1.81168850196412,2.01068167040216,1.1937388322469,0.779856348476481,0.898819408654221,0.432276099749388,0.796565093017469,0.758671603812327,1.37098215131675,0,0.203651327845314,0.193952487167626,1.05203729835478,1.70738650235495,6.6424566590821,8.00693511991011,6.04646103216823,0,0.333690211432188,0.589676985339609,0,0,0.241177159752417,0,0,0,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0.179397413521912,0,0,0.757965647081939,0.814824882210129,0.848725428875941,0.469380496577004,0.167506257441816,0.476087281772027,0.390267295715598,0.945810864637146,0.8858587585951,2.23236676120482,0.81931657357869,1.03610989119537,0.289298117163023,0,0,0,0,7.54587772942622,5.74337264301796,0,0,11.6738041184015,13.2749173060857,27.3587715120655,6.4521575447189,8.02075226696619,7.07691326972081,16.5972387686707,25.1340037803728,26.4842811224171,17.3513510867776,0.851640511249612,0.35613120733451,0.162886959353576,0.164970122972535,0,0.728341908464944,0.906970670894253,0.943025398779491,1.77181135728464,1.53717573971964,1.29214146584111,3.27180356529755,1.06949213515416,0.948110273807448,1.05418608574999,1.03135543248187,0,0.720244376125241,0.517434735131018,0.428674070063185,0.354680467284547,0.178368817602071,0.493647061806363,0.608929898229199,0.23467170806371,0,1.10264199027481,0,0,0,0,0.164140899745061,0.874442509889552,2.59595422814714,0,0.619160603889667,0,0,0,0,0,0,0,1.90934123603023,3.79603192297362,2.23651413839534,3.24016022465404,1.88179466413022,1.09181281873089,0.944050424693745,1.23980183588004,1.04702376793612,0.388844919875379,0.621339313086926,0,1.04661582230785,0.330916980914195,0.194451188344048,0.258319646955462,0,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,1.62180172232131,1.02710957164827,0.51968329191118,0.716106782669926,0.198681354781265,0,0.147689527174577,0,0.15241361331,0.201652370273681,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0,0,0.772758376128762,0,0,0,0,10.1655331671072,5.06357760157895,5.15605962095457,4.64003592327956,4.7955776383945,6.7985450765073,6.75022500231806,4.5032120322422,8.15656336171568,5.1776031175182,1.764384908931,3.19219898720825,2.04880326904961,0.972426868273176,0.419226325255965,1.2869045591501,0.888986911206461,1.23621034343337,1.28367683836726,1.51618327058278,0.760437899670719,0.754505365544305,0.468207537349412,0.704276676453562,0.631790158511746,0.476293691283074,0.927074607558844,0.578727661391115,0.824171801606613,1.17759136107518,0.342869252385415,0.70990322463735,1.1921809497366,0.436039249896986,1.2234219453993,1.18460451048347,0.914639864363863,0.263069711437843,0.271608227691724,0.561142271657738,0.593175090620871,0.394017929502254,0.818462086339379,1.08455788830176,0.771626443924566,1.24905288968973,1.16965804222704,1.28922632428979,0,0.661774257358546,0.231867835620421 | |||
|short_description=p1@Fam163a | |||
}} |
Revision as of 19:20, 13 September 2013
Short description: | p1@Fam163a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam163a_5end |
Coexpression cluster: | MCL_coexpression_mm9:927 |
Association with transcript: | 0bp_to_ENSMUST00000015628, NM_177838, uc007dce.1_5end |
EntrezGene: | Fam163a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.77e-11 | 33 |
neuronal stem cell | 1.77e-11 | 33 |
neuroblast | 1.77e-11 | 33 |
electrically signaling cell | 1.77e-11 | 33 |
autonomic neuron | 1.38e-09 | 9 |
electrically responsive cell | 2.37e-08 | 39 |
electrically active cell | 2.37e-08 | 39 |
neural cell | 8.14e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.96e-15 | 73 |
structure with developmental contribution from neural crest | 2.11e-15 | 92 |
nervous system | 1.44e-14 | 75 |
ectoderm-derived structure | 1.77e-14 | 95 |
ectoderm | 1.77e-14 | 95 |
presumptive ectoderm | 1.77e-14 | 95 |
neurectoderm | 3.08e-13 | 64 |
neural plate | 3.08e-13 | 64 |
presumptive neural plate | 3.08e-13 | 64 |
ecto-epithelium | 7.43e-10 | 73 |
autonomic nervous system | 1.38e-09 | 9 |
gray matter | 4.08e-09 | 34 |
pre-chordal neural plate | 7.97e-09 | 49 |
regional part of nervous system | 8.92e-09 | 54 |
occipital lobe | 2.14e-08 | 10 |
visual cortex | 2.14e-08 | 10 |
neocortex | 2.14e-08 | 10 |
neural tube | 1.88e-07 | 52 |
neural rod | 1.88e-07 | 52 |
future spinal cord | 1.88e-07 | 52 |
neural keel | 1.88e-07 | 52 |
peripheral nervous system | 3.19e-07 | 11 |
adrenal gland | 3.83e-07 | 7 |
adrenal/interrenal gland | 3.83e-07 | 7 |
brain grey matter | 8.67e-07 | 29 |
regional part of telencephalon | 8.67e-07 | 29 |
telencephalon | 8.67e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.