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FFCP PHASE1:Mm9::chr1:52065454..52065495,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20849|HGNC=|MCL_coexpression_id=36|UniProt=Q3V157,P42228|association_with_transcript=366bp_to_ENSMUST00000027277,NM_011487,uc007axw.1,uc007axx.1_5end|description=CAGE_peak_1_at_Stat4_5end|id=chr1:52065454..52065495,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000988,2.67e-08,32;CL:0002032,2.67e-08,32;CL:0000037,2.67e-08,32;CL:0000837,2.67e-08,32;CL:0000791,2.97e-08,9;CL:0000789,2.97e-08,9;CL:0002420,2.97e-08,9;CL:0002419,2.97e-08,9;CL:0000790,2.97e-08,9;CL:0000624,2.07e-07,8;CL:0000838,9.50e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.10e-12!48;UBERON:0002390!9.75e-12!45;UBERON:0003061!9.75e-12!45;UBERON:0004177!4.00e-11!29;UBERON:0002405!4.73e-10!70;UBERON:0001041!2.91e-09!92;UBERON:0000926!4.01e-09!193;UBERON:0004120!4.01e-09!193;UBERON:0006603!4.01e-09!193;UBERON:0003408!4.34e-09!24;UBERON:0001004!8.11e-09!42;UBERON:0002370!8.92e-09!23;UBERON:0000974!8.92e-09!23;UBERON:0004807!8.92e-09!23;UBERON:0005058!8.92e-09!23;UBERON:0003351!8.92e-09!23;UBERON:0009113!8.92e-09!23;UBERON:0003295!8.92e-09!23;UBERON:0009722!8.92e-09!23;UBERON:0005562!8.92e-09!23;UBERON:0007690!8.92e-09!23;UBERON:0000065!1.65e-08!41;UBERON:0006562!2.35e-08!24;UBERON:0001557!2.35e-08!24;UBERON:0001042!2.35e-08!24;UBERON:0008814!2.35e-08!24;UBERON:0009145!2.35e-08!24;UBERON:0000077!2.89e-08!97;UBERON:0005057!1.10e-07!51;UBERON:0003104!1.20e-07!131;UBERON:0009142!1.20e-07!131;UBERON:0003081!1.64e-07!88;UBERON:0001007!5.72e-07!128;UBERON:0001555!5.72e-07!128;UBERON:0007026!5.72e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.32e-18,48;UBERON:0002405,9.32e-18,48;UBERON:0002390,1.67e-16,45;UBERON:0003061,1.67e-16,45;UBERON:0004177,1.80e-15,29;UBERON:0005057,1.80e-15,29;UBERON:0003408,8.50e-13,24;UBERON:0002370,2.16e-12,23;UBERON:0000974,2.16e-12,23;UBERON:0004807,2.16e-12,23;UBERON:0005058,2.16e-12,23;UBERON:0003351,2.16e-12,23;UBERON:0009113,2.16e-12,23;UBERON:0003295,2.16e-12,23;UBERON:0009722,2.16e-12,23;UBERON:0005562,2.16e-12,23;UBERON:0007690,2.16e-12,23;UBERON:0000077,4.91e-12,35;UBERON:0001004,1.38e-11,42;UBERON:0006562,1.65e-11,24;UBERON:0001557,1.65e-11,24;UBERON:0001042,1.65e-11,24;UBERON:0008814,1.65e-11,24;UBERON:0009145,1.65e-11,24;UBERON:0000065,3.50e-11,41;UBERON:0001041,1.51e-10,80;UBERON:0000072,2.74e-09,27;UBERON:0003081,2.22e-08,87;UBERON:0001007,6.44e-07,116;UBERON:0001555,6.44e-07,116;UBERON:0007026,6.44e-07,116;UBERON:0005911,8.99e-07,69|phase1_expression=0,0,0,0,0,0,0,90.1280797622202,16.472280491745,17.3207749478275,13.0125655851384,11.5669630543238,86.4563686152589,81.2135538472486,1.99865857089398,7.08663435864391,2.79824751251259,32.9657962799358,32.6332351981658,26.3121584114779,1.7008658030214,0,0,1.75991665072747,1.37645568640302,0,0,0,0.380046838912748,0.756090389279792,0.886922042621219,0,0,0,0,0,0.204169356262369,53.1535171035873,23.440060335714,62.299325532882,77.6465564200939,64.8893210710523,65.5438976592057,0,0,0,0,0,0,0,0,0,20.1339127269284,47.8739013727487,55.1193830593641,0,0,0,0,0,0,0,0,1.7997994345628,0.988866362566974,0,0,0.768436610643109,0.207379224616955,0.135005938331691,0.210324961351382,0,0,0.122490799214954,0,0,0,0,0,0.263772575460388,0,0.52091337055676,0,0,0.30559649555362,0,0.142371680799103,0,0.530083353332288,0,3.18850937571846,0.860423876981386,0,0,0,0,2.38755514223978,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,1.7127581957859,78.9760545123874,1.92974780784272,0.173485326766136,0.608930956624282,0.461230994512117,0.301445281105245,0.352766121407114,0.125666591329675,0.247194967734374,2.74738778147832,17.6922110389975,0.647067399789637,2.42925670306433,3.39412677194655,1.86391761218122,0,0,2.81002760729451,26.8385878893261,13.197860081855,21.2207279212018,0.449371918214468,0.915001205637253,0.251308704225729,1.39059456153821,4.34716277461562,0.20778804455956,0.324482526135515,2.13862664085664,5.22509276562391,0.758168275301024,0.420883711772948,0.520481771850815,0,0.180062129805349,0.60281927134286,0.136072998302656,0.12811372028485,0.187403449119458,0,1.07783996466421,0.567318240503458,0.879755620819744,0,0.278047249225598,0.696504333044333,0.823128545631774,1.59227413454795,14.7464769335779,14.1541348913093,11.3665399758237,0.621377317606506,1.40715635988658,2.52086886045421,2.13070262026689,1.57411385397923,0.925602677324269,0.465067889500816,0.536546802799238,0.467061369468678,0.329119699826961,0.492502392237286,0.162137619091711,0,0.219550115291051,0.402619256281115,0.420579897128254,0,5.94753809370836,0.528901133327089,0.853153002140936,1.39342003116263,1.03093969057675,1.00841762311671,0.444756087689741,0.380451252225118,0.949058123089023,0.329397909448022,0.251335208800269,1.98956472041151,1.55971269695296,1.79763881730844,0.216138049874694,0.796565093017469,0.189667900953082,0.799739588268102,1.1270773567308,1.4255592949172,1.55161989734101,0.911765658574141,0.505892296994058,0.442830443938806,0.470996183524124,0.123397163921801,0,2.16898637430922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|EntrezGene=20849
|HGNC=
|MCL_coexpression_id=36
|UniProt=Q3V157,P42228
|association_with_transcript=366bp_to_ENSMUST00000027277,NM_011487,uc007axw.1,uc007axx.1_5end
|description=CAGE_peak_1_at_Stat4_5end
|id=chr1:52065454..52065495,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000988,2.67e-08,32;CL:0002032,2.67e-08,32;CL:0000037,2.67e-08,32;CL:0000837,2.67e-08,32;CL:0000791,2.97e-08,9;CL:0000789,2.97e-08,9;CL:0002420,2.97e-08,9;CL:0002419,2.97e-08,9;CL:0000790,2.97e-08,9;CL:0000624,2.07e-07,8;CL:0000838,9.50e-07,12
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!1.10e-12!48;UBERON:0002390!9.75e-12!45;UBERON:0003061!9.75e-12!45;UBERON:0004177!4.00e-11!29;UBERON:0002405!4.73e-10!70;UBERON:0001041!2.91e-09!92;UBERON:0000926!4.01e-09!193;UBERON:0004120!4.01e-09!193;UBERON:0006603!4.01e-09!193;UBERON:0003408!4.34e-09!24;UBERON:0001004!8.11e-09!42;UBERON:0002370!8.92e-09!23;UBERON:0000974!8.92e-09!23;UBERON:0004807!8.92e-09!23;UBERON:0005058!8.92e-09!23;UBERON:0003351!8.92e-09!23;UBERON:0009113!8.92e-09!23;UBERON:0003295!8.92e-09!23;UBERON:0009722!8.92e-09!23;UBERON:0005562!8.92e-09!23;UBERON:0007690!8.92e-09!23;UBERON:0000065!1.65e-08!41;UBERON:0006562!2.35e-08!24;UBERON:0001557!2.35e-08!24;UBERON:0001042!2.35e-08!24;UBERON:0008814!2.35e-08!24;UBERON:0009145!2.35e-08!24;UBERON:0000077!2.89e-08!97;UBERON:0005057!1.10e-07!51;UBERON:0003104!1.20e-07!131;UBERON:0009142!1.20e-07!131;UBERON:0003081!1.64e-07!88;UBERON:0001007!5.72e-07!128;UBERON:0001555!5.72e-07!128;UBERON:0007026!5.72e-07!128
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.32e-18,48;UBERON:0002405,9.32e-18,48;UBERON:0002390,1.67e-16,45;UBERON:0003061,1.67e-16,45;UBERON:0004177,1.80e-15,29;UBERON:0005057,1.80e-15,29;UBERON:0003408,8.50e-13,24;UBERON:0002370,2.16e-12,23;UBERON:0000974,2.16e-12,23;UBERON:0004807,2.16e-12,23;UBERON:0005058,2.16e-12,23;UBERON:0003351,2.16e-12,23;UBERON:0009113,2.16e-12,23;UBERON:0003295,2.16e-12,23;UBERON:0009722,2.16e-12,23;UBERON:0005562,2.16e-12,23;UBERON:0007690,2.16e-12,23;UBERON:0000077,4.91e-12,35;UBERON:0001004,1.38e-11,42;UBERON:0006562,1.65e-11,24;UBERON:0001557,1.65e-11,24;UBERON:0001042,1.65e-11,24;UBERON:0008814,1.65e-11,24;UBERON:0009145,1.65e-11,24;UBERON:0000065,3.50e-11,41;UBERON:0001041,1.51e-10,80;UBERON:0000072,2.74e-09,27;UBERON:0003081,2.22e-08,87;UBERON:0001007,6.44e-07,116;UBERON:0001555,6.44e-07,116;UBERON:0007026,6.44e-07,116;UBERON:0005911,8.99e-07,69
|phase1_expression=0,0,0,0,0,0,0,90.1280797622202,16.472280491745,17.3207749478275,13.0125655851384,11.5669630543238,86.4563686152589,81.2135538472486,1.99865857089398,7.08663435864391,2.79824751251259,32.9657962799358,32.6332351981658,26.3121584114779,1.7008658030214,0,0,1.75991665072747,1.37645568640302,0,0,0,0.380046838912748,0.756090389279792,0.886922042621219,0,0,0,0,0,0.204169356262369,53.1535171035873,23.440060335714,62.299325532882,77.6465564200939,64.8893210710523,65.5438976592057,0,0,0,0,0,0,0,0,0,20.1339127269284,47.8739013727487,55.1193830593641,0,0,0,0,0,0,0,0,1.7997994345628,0.988866362566974,0,0,0.768436610643109,0.207379224616955,0.135005938331691,0.210324961351382,0,0,0.122490799214954,0,0,0,0,0,0.263772575460388,0,0.52091337055676,0,0,0.30559649555362,0,0.142371680799103,0,0.530083353332288,0,3.18850937571846,0.860423876981386,0,0,0,0,2.38755514223978,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,1.7127581957859,78.9760545123874,1.92974780784272,0.173485326766136,0.608930956624282,0.461230994512117,0.301445281105245,0.352766121407114,0.125666591329675,0.247194967734374,2.74738778147832,17.6922110389975,0.647067399789637,2.42925670306433,3.39412677194655,1.86391761218122,0,0,2.81002760729451,26.8385878893261,13.197860081855,21.2207279212018,0.449371918214468,0.915001205637253,0.251308704225729,1.39059456153821,4.34716277461562,0.20778804455956,0.324482526135515,2.13862664085664,5.22509276562391,0.758168275301024,0.420883711772948,0.520481771850815,0,0.180062129805349,0.60281927134286,0.136072998302656,0.12811372028485,0.187403449119458,0,1.07783996466421,0.567318240503458,0.879755620819744,0,0.278047249225598,0.696504333044333,0.823128545631774,1.59227413454795,14.7464769335779,14.1541348913093,11.3665399758237,0.621377317606506,1.40715635988658,2.52086886045421,2.13070262026689,1.57411385397923,0.925602677324269,0.465067889500816,0.536546802799238,0.467061369468678,0.329119699826961,0.492502392237286,0.162137619091711,0,0.219550115291051,0.402619256281115,0.420579897128254,0,5.94753809370836,0.528901133327089,0.853153002140936,1.39342003116263,1.03093969057675,1.00841762311671,0.444756087689741,0.380451252225118,0.949058123089023,0.329397909448022,0.251335208800269,1.98956472041151,1.55971269695296,1.79763881730844,0.216138049874694,0.796565093017469,0.189667900953082,0.799739588268102,1.1270773567308,1.4255592949172,1.55161989734101,0.911765658574141,0.505892296994058,0.442830443938806,0.470996183524124,0.123397163921801,0,2.16898637430922,1.17935397067922,0.899448449539415,0.608580364165509,1.92941727801933,1.78238096246994,0.863088412352432,1.78348749452539,0.549122826376163,2.87536413054709,1.48856379067401,1.5601883655728,1.01031551178845,0.179397413521912,0,7.39012760666419,1.32643988239339,2.77040459951444,1.69745085775188,1.17345124144251,0.670025029767263,0.714130922658041,0.390267295715598,1.7339865851681,2.21464689648775,2.07291199254733,2.45794972073607,3.9717545829156,2.74833211304872,0,0,0.983528546038072,1.65562047782839,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0.709700426041343,2.84904965867608,2.44330439030364,1.15479086080775,2.65490276679926,1.94224508923985,0.906970670894253,0.565815239267694,0.295301892880773,1.22974059177571,0,1.45413491791002,1.06949213515416,2.52829406348653,2.10837217149998,1.03135543248187,1.70219802876894,0.900305470156551,1.03486947026204,1.07168517515796,1.24138163549592,0.713475270408282,0.987294123612726,0.304464949114599,0.469343416127421,0,0.441056796109924,0.16488625294148,0.322928853391811,0.542816324353403,0.119372344003136,0.328281799490123,1.7488850197791,0,12.1318325366475,1.857481811669,4.07427960213366,4.33247451110789,6.01454601972511,7.54967971581525,35.8654487287035,36.3873776041511,36.4847930843679,0,1.10717597753397,1.42323626988794,1.51207477150522,1.04544148007234,0.655087691238533,0.944050424693745,0.578574190077352,0,1.68499465279331,2.4853572523477,2.25477175473676,0.149516546043979,0,0.583353565032143,0.129159823477731,0.675824501963113,0.704143431874524,0.13020438484395,0.104859344425711,0.241584120826006,0.288030006257865,32.5491454247024,8.5144590421869,22.9045434477565,19.2282818007137,18.2607229580831,26.0272574763457,21.3947900145545,22.7441871848849,24.2319479875554,24.9958325828399,24.6015891733891,25.0466753501164,31.6536958996684,38.1018701111915,0.453460767230423,0,0,0,0.19318959403219,1.50145980360946,1.28206136987086,0.643105137237198,1.50471631210609,0.564751842617067,0.920650473014354,1.14579102687879,1.54667864109319,2.05524755931193,3.0215755895588,2.02506750069542,4.05289082901798,2.71885445390523,1.55328093525546,0.415149390336707,1.59609949360412,0.682934423016537,0.729320151204882,1.67690530102386,0.735374033800057,0.666740183404846,0.206035057238894,0.64183841918363,1.01078884705519,0.760437899670719,0.377252682772152,0.0936415074698824,0.576226371643824,0.689225627467359,0.476293691283074,0.115884325944855,0.38581844092741,0,0.294397840268795,0.342869252385415,0.177475806159338,0.476872379894642,0.872078499793971,0.564656282491984,0.423073039458382,0.182927972872773,0.789209134313529,0.679020569229309,0.561142271657738,0.355905054372522,0.394017929502254,1.22769312950907,0.464810523557898,0.578719832943424,0.499621155875892,0.467863216890817,0.859484216193193,0.57386499620653,0.882365676478062,1.85494268496337
|short_description=p1@Stat4
}}

Revision as of 20:29, 13 September 2013

Short description:p1@Stat4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Stat4_5end
Coexpression cluster:MCL_coexpression_mm9:36
Association with transcript: 366bp_to_ENSMUST00000027277, NM_011487, uc007axw.1, uc007axx.1_5end
EntrezGene:Stat4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Stat4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E990.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E716.47
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F217.32
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E613.01
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F111.57
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E486.46
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E881.21
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.09
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A232.97
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A432.63
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A626.31
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G853.15
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H123.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H362.30
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G977.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H264.89
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H465.54
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A220.13
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I947.87
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A155.12
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.71
accessory axillary lymph node, adult.CNhs10475.1063-29H978.98
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H12.75
bone (os femoris), adult.CNhs10483.56-12G217.69
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C726.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D113.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D421.22
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.23
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C814.75
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D214.15
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D511.37
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I35.95
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F41.78
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B17.39
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F82.77
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A42.46
lung, neonate N25.CNhs11119.1359-25C73.97
lung, neonate N30.CNhs11133.1394-42H22.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H72.85
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G212.13
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F24.07
spleen, neonate N10.CNhs11116.752-24D14.33
spleen, neonate N20.CNhs11112.824-19H16.01
spleen, neonate N25.CNhs11099.1354-25G37.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C635.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C936.39
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D336.48
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I11.68
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B532.55
thymus, embryo E14.CNhs11041.402-44I48.51
thymus, embryo E15.CNhs11005.430-45I222.90
thymus, embryo E16.CNhs11002.456-26C519.23
thymus, embryo E17.CNhs10581.478-18C118.26
thymus, embryo E18.CNhs10595.1273-19G426.03
thymus, neonate N02.CNhs11181.1541-43F821.39
thymus, neonate N03.CNhs11137.2104-43C722.74
thymus, neonate N06.CNhs11197.681-26C424.23
thymus, neonate N07.CNhs11211.713-19D325.00
thymus, neonate N10.CNhs11194.748-24E424.60
thymus, neonate N20.CNhs11186.820-7A225.05
thymus, neonate N25.CNhs11125.1362-25G731.65
thymus, neonate N30.CNhs11132.1393-42G238.10
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system9.32e-1848
immune system9.32e-1848
hematopoietic system1.67e-1645
blood island1.67e-1645
hemopoietic organ1.80e-1529
immune organ1.80e-1529
gland of gut8.50e-1324
thymus2.16e-1223
neck2.16e-1223
respiratory system epithelium2.16e-1223
hemolymphoid system gland2.16e-1223
pharyngeal epithelium2.16e-1223
thymic region2.16e-1223
pharyngeal gland2.16e-1223
entire pharyngeal arch endoderm2.16e-1223
thymus primordium2.16e-1223
early pharyngeal endoderm2.16e-1223
mixed endoderm/mesoderm-derived structure4.91e-1235
respiratory system1.38e-1142
pharynx1.65e-1124
upper respiratory tract1.65e-1124
chordate pharynx1.65e-1124
pharyngeal arch system1.65e-1124
pharyngeal region of foregut1.65e-1124
respiratory tract3.50e-1141
foregut1.51e-1080
segment of respiratory tract2.74e-0927
lateral plate mesoderm2.22e-0887
digestive system6.44e-07116
digestive tract6.44e-07116
primitive gut6.44e-07116
endo-epithelium8.99e-0769







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