FFCP PHASE1:Mm9::chr2:125860373..125860382,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14178|HGNC=|MCL_coexpression_id=453|UniProt=P36363,Q544I6|association_with_transcript=-11bp_to_ENSMUST00000064794,ENSMUST00000138576,NM_008008,uc012cdg.1_5end|description=CAGE_peak_7_at_Fgf7_5end|id=chr2:125860373..125860382,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,3.99e-17,3;CL:0000359,3.99e-17,3;CL:0002539,3.99e-17,3;CL:0000514,3.99e-17,3;CL:0000680,7.98e-09,6;CL:0000187,7.98e-09,6;CL:0000056,7.98e-09,6;CL:0000222,1.25e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!3.46e-08!14;UBERON:0000117!3.46e-08!14;UBERON:0000171!3.46e-08!14;UBERON:0000170!3.46e-08!14;UBERON:0005597!3.46e-08!14;UBERON:0000118!3.46e-08!14|ontology_enrichment_uberon_v019_2=UBERON:0001135,3.99e-17,3;UBERON:0004237,3.99e-17,3;UBERON:0004695,3.99e-17,3;UBERON:0002111,3.99e-17,3;UBERON:0004178,3.99e-17,3;UBERON:0000947,5.50e-13,4;UBERON:0001637,5.50e-13,4;UBERON:0004573,5.50e-13,4;UBERON:0003509,5.50e-13,4;UBERON:0004571,5.50e-13,4;UBERON:0010191,5.50e-13,4;UBERON:0004572,5.50e-13,4;UBERON:0000055,1.71e-10,5;UBERON:0007500,1.71e-10,5;UBERON:0001981,1.71e-10,5;UBERON:0002049,1.71e-10,5;UBERON:0007798,1.71e-10,5;UBERON:0004537,1.71e-10,5;UBERON:0006965,1.71e-10,5;UBERON:0002048,6.23e-09,14;UBERON:0000117,6.23e-09,14;UBERON:0000171,6.23e-09,14;UBERON:0000170,6.23e-09,14;UBERON:0005597,6.23e-09,14;UBERON:0000118,6.23e-09,14;UBERON:0005153,2.47e-07,17;UBERON:0005178,2.47e-07,17;UBERON:0005181,2.47e-07,17;UBERON:0002224,2.47e-07,17;UBERON:0000915,2.47e-07,17;UBERON:0008947,2.47e-07,17;UBERON:0003258,2.47e-07,17|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.297872853602656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.55380907853464,5.98123894195136,2.56965453026354,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.151452386666368,0.68014404096107,0,0,0,0,0,0,0.421333260395256,7.32850387085648,4.67614808285164,2.47337702157238,0.281686839553361,6.41632387071589,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0,0.86759614151947,0,1.13236794963186,0,0,0,1.75668478206928,0.41889341362691,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0.305518091550949,0.248813941220186,0.252722758433675,0.210441855886474,0,0,0,0,0.136072998302656,0.12811372028485,0.187403449119458,0,0.215567992932842,0,0,0.657587197282725,0.278047249225598,0.348252166522167,1.64625709126355,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0.162137619091711,0,0.439100230582101,0.268412837520744,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0,0.162964976442026,0.169745085775188,0.704070744865506,0.335012514883631,0,0.780534591431195,1.26108115284953,1.32878813789265,0.478364305972461,1.14704320301017,1.38147985492716,1.15719246865209,0,0,0,0,0,0,4.42624352517024,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0.494910368917606,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0.32977250588296,0.161464426695906,0.482503399425247,0.238744688006273,0.164140899745061,0,0,0,0,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0,0,0.247960367176008,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0.168956125490778,0.117357238645754,0.39061315453185,0.104859344425711,0,0,0,0.810900861160657,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,0.965947970160952,0.93841237725591,0.183151624267265,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0.412070114477788,0.962757628775446,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.384150914429216,0.516919220600519,0.476293691283074,0,0.38581844092741,0.412085900803307,0.147198920134397,0,0.354951612318675,0.238436189947321,0.436039249896986,0.282328141245992,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0.214871054048298,0.765153328275374,0.661774257358546,0.463735671240843|short_description=p7@Fgf7}} | ||
|EntrezGene=14178 | |||
|HGNC= | |||
|MCL_coexpression_id=453 | |||
|UniProt=P36363,Q544I6 | |||
|association_with_transcript=-11bp_to_ENSMUST00000064794,ENSMUST00000138576,NM_008008,uc012cdg.1_5end | |||
|description=CAGE_peak_7_at_Fgf7_5end | |||
|id=chr2:125860373..125860382,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.99e-17,3;CL:0000359,3.99e-17,3;CL:0002539,3.99e-17,3;CL:0000514,3.99e-17,3;CL:0000680,7.98e-09,6;CL:0000187,7.98e-09,6;CL:0000056,7.98e-09,6;CL:0000222,1.25e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!3.46e-08!14;UBERON:0000117!3.46e-08!14;UBERON:0000171!3.46e-08!14;UBERON:0000170!3.46e-08!14;UBERON:0005597!3.46e-08!14;UBERON:0000118!3.46e-08!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,3.99e-17,3;UBERON:0004237,3.99e-17,3;UBERON:0004695,3.99e-17,3;UBERON:0002111,3.99e-17,3;UBERON:0004178,3.99e-17,3;UBERON:0000947,5.50e-13,4;UBERON:0001637,5.50e-13,4;UBERON:0004573,5.50e-13,4;UBERON:0003509,5.50e-13,4;UBERON:0004571,5.50e-13,4;UBERON:0010191,5.50e-13,4;UBERON:0004572,5.50e-13,4;UBERON:0000055,1.71e-10,5;UBERON:0007500,1.71e-10,5;UBERON:0001981,1.71e-10,5;UBERON:0002049,1.71e-10,5;UBERON:0007798,1.71e-10,5;UBERON:0004537,1.71e-10,5;UBERON:0006965,1.71e-10,5;UBERON:0002048,6.23e-09,14;UBERON:0000117,6.23e-09,14;UBERON:0000171,6.23e-09,14;UBERON:0000170,6.23e-09,14;UBERON:0005597,6.23e-09,14;UBERON:0000118,6.23e-09,14;UBERON:0005153,2.47e-07,17;UBERON:0005178,2.47e-07,17;UBERON:0005181,2.47e-07,17;UBERON:0002224,2.47e-07,17;UBERON:0000915,2.47e-07,17;UBERON:0008947,2.47e-07,17;UBERON:0003258,2.47e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.297872853602656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.55380907853464,5.98123894195136,2.56965453026354,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.151452386666368,0.68014404096107,0,0,0,0,0,0,0.421333260395256,7.32850387085648,4.67614808285164,2.47337702157238,0.281686839553361,6.41632387071589,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0,0.86759614151947,0,1.13236794963186,0,0,0,1.75668478206928,0.41889341362691,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0.305518091550949,0.248813941220186,0.252722758433675,0.210441855886474,0,0,0,0,0.136072998302656,0.12811372028485,0.187403449119458,0,0.215567992932842,0,0,0.657587197282725,0.278047249225598,0.348252166522167,1.64625709126355,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0.162137619091711,0,0.439100230582101,0.268412837520744,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0,0.162964976442026,0.169745085775188,0.704070744865506,0.335012514883631,0,0.780534591431195,1.26108115284953,1.32878813789265,0.478364305972461,1.14704320301017,1.38147985492716,1.15719246865209,0,0,0,0,0,0,4.42624352517024,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0.494910368917606,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0.32977250588296,0.161464426695906,0.482503399425247,0.238744688006273,0.164140899745061,0,0,0,0,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0,0,0.247960367176008,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0.168956125490778,0.117357238645754,0.39061315453185,0.104859344425711,0,0,0,0.810900861160657,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,0.965947970160952,0.93841237725591,0.183151624267265,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0.412070114477788,0.962757628775446,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.384150914429216,0.516919220600519,0.476293691283074,0,0.38581844092741,0.412085900803307,0.147198920134397,0,0.354951612318675,0.238436189947321,0.436039249896986,0.282328141245992,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0.214871054048298,0.765153328275374,0.661774257358546,0.463735671240843 | |||
|short_description=p7@Fgf7 | |||
}} |
Revision as of 21:56, 13 September 2013
Short description: | p7@Fgf7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Fgf7_5end |
Coexpression cluster: | MCL_coexpression_mm9:453 |
Association with transcript: | -11bp_to_ENSMUST00000064794, ENSMUST00000138576, NM_008008, uc012cdg.1_5end |
EntrezGene: | Fgf7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.99e-17 | 3 |
vascular associated smooth muscle cell | 3.99e-17 | 3 |
aortic smooth muscle cell | 3.99e-17 | 3 |
smooth muscle myoblast | 3.99e-17 | 3 |
muscle precursor cell | 7.98e-09 | 6 |
muscle cell | 7.98e-09 | 6 |
myoblast | 7.98e-09 | 6 |
mesodermal cell | 1.25e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 3.99e-17 | 3 |
blood vessel smooth muscle | 3.99e-17 | 3 |
arterial system smooth muscle | 3.99e-17 | 3 |
artery smooth muscle tissue | 3.99e-17 | 3 |
aorta smooth muscle tissue | 3.99e-17 | 3 |
aorta | 5.50e-13 | 4 |
artery | 5.50e-13 | 4 |
systemic artery | 5.50e-13 | 4 |
arterial blood vessel | 5.50e-13 | 4 |
systemic arterial system | 5.50e-13 | 4 |
aortic system | 5.50e-13 | 4 |
arterial system | 5.50e-13 | 4 |
vessel | 1.71e-10 | 5 |
epithelial tube open at both ends | 1.71e-10 | 5 |
blood vessel | 1.71e-10 | 5 |
vasculature | 1.71e-10 | 5 |
vascular system | 1.71e-10 | 5 |
blood vasculature | 1.71e-10 | 5 |
vascular cord | 1.71e-10 | 5 |
lung | 6.23e-09 | 14 |
respiratory tube | 6.23e-09 | 14 |
respiration organ | 6.23e-09 | 14 |
pair of lungs | 6.23e-09 | 14 |
lung primordium | 6.23e-09 | 14 |
lung bud | 6.23e-09 | 14 |
epithelial bud | 2.47e-07 | 17 |
thoracic cavity element | 2.47e-07 | 17 |
thoracic segment organ | 2.47e-07 | 17 |
thoracic cavity | 2.47e-07 | 17 |
thoracic segment of trunk | 2.47e-07 | 17 |
respiratory primordium | 2.47e-07 | 17 |
endoderm of foregut | 2.47e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.