FFCP PHASE1:Hg19::chr6:8436206..8436217,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51000|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21601|TSSclassifier=S|UniProt=Q9H1N7|association_with_transcript=-412bp_to_ENST00000339306,NM_001142540,NM_001142541,NM_015948,uc003myb.2,uc003myd.2,uc010joe.2,uc010jof.2,uc011did.1,uc011die.1_5end|coexpression_cluster_id=C39|description=CAGE_peak_7_at_SLC35B3_5end|id=chr6:8436206..8436217,-|ontology_enrichment_celltype=CL:0002541!6.68e-14!3;CL:0002536!6.48e-10!2|ontology_enrichment_celltype_v019=CL:0002577;1.71e-14;3!CL:0002149;6.55e-08;6!CL:0002255;6.55e-08;6|ontology_enrichment_celltype_v019_2=CL:0002577,1.60e-14,3;CL:0002149,6.78e-08,6;CL:0002255,6.78e-08,6|ontology_enrichment_development_v019=UBERON:0007297;1.91e-79;2!UBERON:0005754;1.81e-40;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3001;6.55e-08;6|ontology_enrichment_disease_v019_2=DOID:3001,6.78e-08,6|ontology_enrichment_uberon=UBERON:0005631!2.14e-19!14;UBERON:0000158!2.14e-19!14;UBERON:0003124!5.62e-16!7;UBERON:0006947!6.56e-15!3;UBERON:0004054!6.56e-15!3;UBERON:0000476!6.68e-14!3;UBERON:0000920!6.68e-14!3;UBERON:0000478!1.94e-13!24;UBERON:0005156!2.55e-13!59;UBERON:0000990!2.55e-13!59;UBERON:0004175!4.26e-13!25;UBERON:0005904!2.73e-11!4;UBERON:0003133!6.96e-11!48;UBERON:0003101!6.97e-09!22;UBERON:0000079!6.97e-09!22;UBERON:0003100!1.07e-08!41;UBERON:0004923!4.63e-07!57;UBERON:0000995!4.92e-07!21;UBERON:0003135!6.84e-07!11|ontology_enrichment_uberon_v019=UBERON:0006947;5.20e-118;3!UBERON:0004054;5.20e-118;3!UBERON:0005904;7.72e-89;4!UBERON:0001301;6.62e-41;1!UBERON:0001000;1.81e-40;1!UBERON:0000998;1.81e-40;1!UBERON:0006868;1.81e-40;1!UBERON:0005352;1.81e-40;1!UBERON:0000058;3.05e-36;10!UBERON:0003135;4.79e-33;11!UBERON:0004175;1.08e-30;21!UBERON:0003101;5.13e-17;22!UBERON:0000079;5.13e-17;22!UBERON:0001987;3.26e-11;4!UBERON:0003133;5.46e-09;44!UBERON:0005156;7.36e-09;59!UBERON:0000990;7.36e-09;59|ontology_enrichment_uberon_v019_2=UBERON:0006947,5.20e-118,3;UBERON:0004054,5.20e-118,3;UBERON:0005904,7.73e-89,4;UBERON:0001301,6.62e-41,1;UBERON:0000998,9.91e-41,1;UBERON:0006868,9.91e-41,1;UBERON:0001000,3.30e-40,1;UBERON:0005352,3.30e-40,1;UBERON:0004175,6.36e-40,25;UBERON:0003135,4.79e-33,11;UBERON:0003133,3.34e-21,48;UBERON:0000058,1.48e-19,19;UBERON:0000080,1.03e-18,9;UBERON:0002120,1.03e-18,9;UBERON:0004875,1.03e-18,9;UBERON:0005721,1.03e-18,9;UBERON:0005754,1.03e-18,9;UBERON:0007297,1.03e-18,9;UBERON:0005156,2.16e-17,59;UBERON:0000990,2.16e-17,59;UBERON:0003101,5.13e-17,22;UBERON:0000079,5.13e-17,22;UBERON:0004876,1.62e-15,11;UBERON:0003887,2.57e-14,12;UBERON:0001987,3.10e-11,4;UBERON:0004340,3.10e-11,4;UBERON:0000995,1.48e-08,21;UBERON:0006554,2.00e-08,47;UBERON:0001008,2.89e-08,48;UBERON:0005795,3.27e-08,22;UBERON:0003975,3.27e-08,22;UBERON:0002113,3.78e-07,26;UBERON:0003918,3.78e-07,26;UBERON:0011143,3.78e-07,26;UBERON:0005095,3.78e-07,26;UBERON:0007687,3.78e-07,26;UBERON:0003124,5.70e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.957003479195758,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0.816164040795739,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,1.57833761139756,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.195984794828755,0.261177619741208,7.86270007089136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51000 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21601 | |||
|TSSclassifier=S | |||
|UniProt=Q9H1N7 | |||
|association_with_transcript=-412bp_to_ENST00000339306,NM_001142540,NM_001142541,NM_015948,uc003myb.2,uc003myd.2,uc010joe.2,uc010jof.2,uc011did.1,uc011die.1_5end | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_7_at_SLC35B3_5end | |||
|id=chr6:8436206..8436217,- | |||
|ontology_enrichment_celltype=CL:0002541!6.68e-14!3;CL:0002536!6.48e-10!2 | |||
|ontology_enrichment_celltype_v019=CL:0002577;1.71e-14;3!CL:0002149;6.55e-08;6!CL:0002255;6.55e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.60e-14,3;CL:0002149,6.78e-08,6;CL:0002255,6.78e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.91e-79;2!UBERON:0005754;1.81e-40;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3001;6.55e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,6.78e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.14e-19!14;UBERON:0000158!2.14e-19!14;UBERON:0003124!5.62e-16!7;UBERON:0006947!6.56e-15!3;UBERON:0004054!6.56e-15!3;UBERON:0000476!6.68e-14!3;UBERON:0000920!6.68e-14!3;UBERON:0000478!1.94e-13!24;UBERON:0005156!2.55e-13!59;UBERON:0000990!2.55e-13!59;UBERON:0004175!4.26e-13!25;UBERON:0005904!2.73e-11!4;UBERON:0003133!6.96e-11!48;UBERON:0003101!6.97e-09!22;UBERON:0000079!6.97e-09!22;UBERON:0003100!1.07e-08!41;UBERON:0004923!4.63e-07!57;UBERON:0000995!4.92e-07!21;UBERON:0003135!6.84e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;5.20e-118;3!UBERON:0004054;5.20e-118;3!UBERON:0005904;7.72e-89;4!UBERON:0001301;6.62e-41;1!UBERON:0001000;1.81e-40;1!UBERON:0000998;1.81e-40;1!UBERON:0006868;1.81e-40;1!UBERON:0005352;1.81e-40;1!UBERON:0000058;3.05e-36;10!UBERON:0003135;4.79e-33;11!UBERON:0004175;1.08e-30;21!UBERON:0003101;5.13e-17;22!UBERON:0000079;5.13e-17;22!UBERON:0001987;3.26e-11;4!UBERON:0003133;5.46e-09;44!UBERON:0005156;7.36e-09;59!UBERON:0000990;7.36e-09;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,5.20e-118,3;UBERON:0004054,5.20e-118,3;UBERON:0005904,7.73e-89,4;UBERON:0001301,6.62e-41,1;UBERON:0000998,9.91e-41,1;UBERON:0006868,9.91e-41,1;UBERON:0001000,3.30e-40,1;UBERON:0005352,3.30e-40,1;UBERON:0004175,6.36e-40,25;UBERON:0003135,4.79e-33,11;UBERON:0003133,3.34e-21,48;UBERON:0000058,1.48e-19,19;UBERON:0000080,1.03e-18,9;UBERON:0002120,1.03e-18,9;UBERON:0004875,1.03e-18,9;UBERON:0005721,1.03e-18,9;UBERON:0005754,1.03e-18,9;UBERON:0007297,1.03e-18,9;UBERON:0005156,2.16e-17,59;UBERON:0000990,2.16e-17,59;UBERON:0003101,5.13e-17,22;UBERON:0000079,5.13e-17,22;UBERON:0004876,1.62e-15,11;UBERON:0003887,2.57e-14,12;UBERON:0001987,3.10e-11,4;UBERON:0004340,3.10e-11,4;UBERON:0000995,1.48e-08,21;UBERON:0006554,2.00e-08,47;UBERON:0001008,2.89e-08,48;UBERON:0005795,3.27e-08,22;UBERON:0003975,3.27e-08,22;UBERON:0002113,3.78e-07,26;UBERON:0003918,3.78e-07,26;UBERON:0011143,3.78e-07,26;UBERON:0005095,3.78e-07,26;UBERON:0007687,3.78e-07,26;UBERON:0003124,5.70e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.957003479195758,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0.816164040795739,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,1.57833761139756,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.195984794828755,0.261177619741208,7.86270007089136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.532214220975833,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69354820076372,1.60374807980835,0,0,0.335566295393377,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0,0.202117188958219,0.217716747896961,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@SLC35B3 | |||
}} |
Revision as of 22:00, 13 September 2013
Short description: | p7@SLC35B3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_SLC35B3_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | -412bp_to_ENST00000339306, NM_001142540, NM_001142541, NM_015948, uc003myb.2, uc003myd.2, uc010joe.2, uc010jof.2, uc011did.1, uc011die.1_5end |
EntrezGene: | SLC35B3 |
HGNC: | 21601 |
UniProt: | Q9H1N7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.60e-14 | 3 |
epithelial cell of uterus | 6.78e-08 | 6 |
stromal cell of endometrium | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 6.78e-08 | 6 |
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