FFCP PHASE1:Mm9::chr2:167893754..167893803,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1185|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:167893754..167893803,-|id=chr2:167893754..167893803,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,1.02e-17,3;CL:0002202,1.02e-17,3;CL:0000069,1.02e-17,3;CL:0002632,1.02e-17,3;CL:0002368,1.02e-17,3;CL:0000307,1.02e-17,3;CL:0000377,1.02e-17,3;CL:0000349,1.17e-17,3;CL:0000351,1.17e-17,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!1.96e-18!17;UBERON:0005181!1.96e-18!17;UBERON:0002224!1.96e-18!17;UBERON:0000915!1.96e-18!17;UBERON:0008947!1.96e-18!17;UBERON:0003258!1.96e-18!17;UBERON:0002048!6.36e-14!14;UBERON:0000117!6.36e-14!14;UBERON:0000171!6.36e-14!14;UBERON:0000170!6.36e-14!14;UBERON:0005597!6.36e-14!14;UBERON:0000118!6.36e-14!14;UBERON:0005153!6.18e-11!17;UBERON:0009569!2.18e-08!66;UBERON:0005157!5.55e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0005178,1.17e-33,17;UBERON:0005181,1.17e-33,17;UBERON:0002224,1.17e-33,17;UBERON:0000915,1.17e-33,17;UBERON:0008947,1.17e-33,17;UBERON:0003258,1.17e-33,17;UBERON:0002048,1.53e-20,14;UBERON:0000117,1.53e-20,14;UBERON:0000171,1.53e-20,14;UBERON:0000170,1.53e-20,14;UBERON:0005597,1.53e-20,14;UBERON:0000118,1.53e-20,14;UBERON:0003126,1.02e-17,3;UBERON:0001005,1.02e-17,3;UBERON:0007196,1.02e-17,3;UBERON:0001558,1.02e-17,3;UBERON:0000358,1.17e-17,3;UBERON:0000307,1.17e-17,3;UBERON:0007010,1.17e-17,3;UBERON:0005153,7.99e-17,17;UBERON:0005157,3.23e-14,20;UBERON:0000065,2.61e-13,41;UBERON:0001004,5.77e-13,42;UBERON:0005631,3.42e-09,3;UBERON:0000478,3.42e-09,3;UBERON:0000158,3.42e-09,3;UBERON:0009569,8.42e-08,66;UBERON:0000305,1.59e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,1.73192832808971,1.77351905832569,2.02209778005913,0,0,0,0,0,0,0,0,0.251333182659351,7.41584903203122,0.578397427679647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0.330418782983798,0,0,0,0,0,0.22237804384487,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.295220295959204,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,7.57488079683079,0,0,0,0.234690248288502,0.502518772325447,0.952174563544055,0.975668239288994,1.89162172927429,1.99318220683897,2.07291199254733,4.91589944147214,3.9717545829156,10.1254341007058,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0.23467170806371,5.93129798418696,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0,0,0,0,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,1.99787358036658,1.07656627931371,1.84673078000486,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421|short_description=p@chr2:167893754..167893803,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1185 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:167893754..167893803,- | |||
|id=chr2:167893754..167893803,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.02e-17,3;CL:0002202,1.02e-17,3;CL:0000069,1.02e-17,3;CL:0002632,1.02e-17,3;CL:0002368,1.02e-17,3;CL:0000307,1.02e-17,3;CL:0000377,1.02e-17,3;CL:0000349,1.17e-17,3;CL:0000351,1.17e-17,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!1.96e-18!17;UBERON:0005181!1.96e-18!17;UBERON:0002224!1.96e-18!17;UBERON:0000915!1.96e-18!17;UBERON:0008947!1.96e-18!17;UBERON:0003258!1.96e-18!17;UBERON:0002048!6.36e-14!14;UBERON:0000117!6.36e-14!14;UBERON:0000171!6.36e-14!14;UBERON:0000170!6.36e-14!14;UBERON:0005597!6.36e-14!14;UBERON:0000118!6.36e-14!14;UBERON:0005153!6.18e-11!17;UBERON:0009569!2.18e-08!66;UBERON:0005157!5.55e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,1.17e-33,17;UBERON:0005181,1.17e-33,17;UBERON:0002224,1.17e-33,17;UBERON:0000915,1.17e-33,17;UBERON:0008947,1.17e-33,17;UBERON:0003258,1.17e-33,17;UBERON:0002048,1.53e-20,14;UBERON:0000117,1.53e-20,14;UBERON:0000171,1.53e-20,14;UBERON:0000170,1.53e-20,14;UBERON:0005597,1.53e-20,14;UBERON:0000118,1.53e-20,14;UBERON:0003126,1.02e-17,3;UBERON:0001005,1.02e-17,3;UBERON:0007196,1.02e-17,3;UBERON:0001558,1.02e-17,3;UBERON:0000358,1.17e-17,3;UBERON:0000307,1.17e-17,3;UBERON:0007010,1.17e-17,3;UBERON:0005153,7.99e-17,17;UBERON:0005157,3.23e-14,20;UBERON:0000065,2.61e-13,41;UBERON:0001004,5.77e-13,42;UBERON:0005631,3.42e-09,3;UBERON:0000478,3.42e-09,3;UBERON:0000158,3.42e-09,3;UBERON:0009569,8.42e-08,66;UBERON:0000305,1.59e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,1.73192832808971,1.77351905832569,2.02209778005913,0,0,0,0,0,0,0,0,0.251333182659351,7.41584903203122,0.578397427679647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0.330418782983798,0,0,0,0,0,0.22237804384487,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.295220295959204,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,7.57488079683079,0,0,0,0.234690248288502,0.502518772325447,0.952174563544055,0.975668239288994,1.89162172927429,1.99318220683897,2.07291199254733,4.91589944147214,3.9717545829156,10.1254341007058,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0.23467170806371,5.93129798418696,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0,0,0,0,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,1.99787358036658,1.07656627931371,1.84673078000486,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p@chr2:167893754..167893803,- | |||
}} |
Revision as of 23:00, 13 September 2013
Short description: | p@chr2:167893754..167893803, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:167893754..167893803, - |
Coexpression cluster: | MCL_coexpression_mm9:1185 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.02e-17 | 3 |
epithelial cell of tracheobronchial tree | 1.02e-17 | 3 |
branched duct epithelial cell | 1.02e-17 | 3 |
epithelial cell of lower respiratory tract | 1.02e-17 | 3 |
respiratory epithelial cell | 1.02e-17 | 3 |
tracheal epithelial cell | 1.02e-17 | 3 |
tracheoblast | 1.02e-17 | 3 |
extraembryonic cell | 1.17e-17 | 3 |
trophoblast cell | 1.17e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 1.17e-33 | 17 |
thoracic segment organ | 1.17e-33 | 17 |
thoracic cavity | 1.17e-33 | 17 |
thoracic segment of trunk | 1.17e-33 | 17 |
respiratory primordium | 1.17e-33 | 17 |
endoderm of foregut | 1.17e-33 | 17 |
lung | 1.53e-20 | 14 |
respiratory tube | 1.53e-20 | 14 |
respiration organ | 1.53e-20 | 14 |
pair of lungs | 1.53e-20 | 14 |
lung primordium | 1.53e-20 | 14 |
lung bud | 1.53e-20 | 14 |
trachea | 1.02e-17 | 3 |
respiratory airway | 1.02e-17 | 3 |
tracheobronchial tree | 1.02e-17 | 3 |
lower respiratory tract | 1.02e-17 | 3 |
blastocyst | 1.17e-17 | 3 |
blastula | 1.17e-17 | 3 |
cleaving embryo | 1.17e-17 | 3 |
epithelial bud | 7.99e-17 | 17 |
epithelial fold | 3.23e-14 | 20 |
respiratory tract | 2.61e-13 | 41 |
respiratory system | 5.77e-13 | 42 |
extraembryonic membrane | 3.42e-09 | 3 |
extraembryonic structure | 3.42e-09 | 3 |
membranous layer | 3.42e-09 | 3 |
subdivision of trunk | 8.42e-08 | 66 |
amnion | 1.59e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.