FFCP PHASE1:Mm9::chr2:92792283..92792288,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3376|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:92792283..92792288,+|id=chr2:92792283..92792288,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!1.75e-14!86;UBERON:0000153!1.80e-12!94;UBERON:0001049!3.67e-11!52;UBERON:0005068!3.67e-11!52;UBERON:0006241!3.67e-11!52;UBERON:0007135!3.67e-11!52;UBERON:0000955!1.12e-10!50;UBERON:0006238!1.12e-10!50;UBERON:0002021!1.25e-10!10;UBERON:0000411!1.25e-10!10;UBERON:0001950!1.25e-10!10;UBERON:0000033!1.83e-10!63;UBERON:0002616!3.41e-10!49;UBERON:0003056!9.82e-10!49;UBERON:0003080!3.72e-09!40;UBERON:0002780!6.49e-09!39;UBERON:0001890!6.49e-09!39;UBERON:0006240!6.49e-09!39;UBERON:0002346!1.99e-08!71;UBERON:0003075!1.99e-08!71;UBERON:0007284!1.99e-08!71;UBERON:0001017!6.06e-08!73;UBERON:0005743!6.06e-08!73;UBERON:0002020!1.22e-07!34;UBERON:0000073!1.99e-07!75;UBERON:0001016!1.99e-07!75;UBERON:0002791!2.58e-07!29;UBERON:0003528!2.58e-07!29;UBERON:0001893!2.58e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.34e-27,10;UBERON:0000411,2.34e-27,10;UBERON:0001950,2.34e-27,10;UBERON:0002619,1.14e-15,17;UBERON:0000956,1.76e-12,21;UBERON:0001869,1.76e-12,21;UBERON:0000203,1.76e-12,21;UBERON:0002616,1.55e-11,46;UBERON:0000955,3.02e-11,47;UBERON:0006238,3.02e-11,47;UBERON:0003528,6.44e-11,29;UBERON:0002791,6.44e-11,29;UBERON:0001893,6.44e-11,29;UBERON:0001049,5.69e-10,52;UBERON:0005068,5.69e-10,52;UBERON:0006241,5.69e-10,52;UBERON:0007135,5.69e-10,52;UBERON:0002780,1.54e-09,39;UBERON:0001890,1.54e-09,39;UBERON:0006240,1.54e-09,39;UBERON:0000073,1.58e-09,54;UBERON:0003080,2.92e-09,40;UBERON:0002020,4.09e-09,34;UBERON:0002346,1.01e-07,64;UBERON:0003075,1.01e-07,64;UBERON:0007284,1.01e-07,64;UBERON:0003056,2.86e-07,49|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.766124028511126,0,0.263772575460388,0.365950574409639,1.04182674111352,0.279182999001381,0,0.30559649555362,0.294628585473668,0.284743361598206,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,1.25668024088073,0,0,0,0,0.149790639404823,0,0.125654352112864,0.869121600961382,0,0.62336413367868,0.648965052271031,0.101839363850316,0,0,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,0.776110112217047,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.162137619091711,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0,0.342745537829186,0,0,0.193952487167626,0.0701358198903186,0,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0,0.178065603667255,0.488660878060728,0,0,0.485561272309963,1.209294227859,0.377210159511796,0.295301892880773,0.307435147943927,0.258428293168221,1.09060118843252,0.712994756769443,0.316036757935816,1.05418608574999,0,1.02131881726136,0,0,0,0.354680467284547,0.891844088010353,0,0.304464949114599,0,0.21183207086382,0,0,0.322928853391811,0.0603129249281559,0,0,0,0.18542530201051,0,0,0,0,0,0,0.169978429993855,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0.404593039154462,0.247960367176008,0,0.259229946583586,0,0,0.149516546043979,0,0,0.774958940866387,0.506868376472335,0.352071715937262,0,0.209718688851422,0,0,0.632022241256357,0,0.102710957164827,0.649604114888975,0.537080087002444,0.198681354781265,1.32214994471966,0.738447635872886,1.61546319917036,1.06689529317,1.71404514732629,1.94915761479505,0.865906574762965,1.8700304349051,0,0,0,0,0,0,0.183151624267265,0,0,1.6942555278512,2.76195141904306,1.14579102687879,4.64003592327956,0.685082519770642,1.5107877947794,2.70009000092722,0.45032120322422,1.35942722695261,2.07104124700728,0,0.399024873401031,0,0.486213434136588,0,0,0,0,0,0,0,0,0.187283014939765,0.128050304809739,0.229741875822453,0,0,0,0,0.294397840268795,0,0,0,0,0.282328141245992,0.169229215783353,0.182927972872773,0.263069711437843,0,0.561142271657738,0,0,0.409231043169689,0,0.192906610981141,0,0,0,0,0.441182838239031,0.231867835620421|short_description=p@chr2:92792283..92792288,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3376 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:92792283..92792288,+ | |||
|id=chr2:92792283..92792288,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!1.75e-14!86;UBERON:0000153!1.80e-12!94;UBERON:0001049!3.67e-11!52;UBERON:0005068!3.67e-11!52;UBERON:0006241!3.67e-11!52;UBERON:0007135!3.67e-11!52;UBERON:0000955!1.12e-10!50;UBERON:0006238!1.12e-10!50;UBERON:0002021!1.25e-10!10;UBERON:0000411!1.25e-10!10;UBERON:0001950!1.25e-10!10;UBERON:0000033!1.83e-10!63;UBERON:0002616!3.41e-10!49;UBERON:0003056!9.82e-10!49;UBERON:0003080!3.72e-09!40;UBERON:0002780!6.49e-09!39;UBERON:0001890!6.49e-09!39;UBERON:0006240!6.49e-09!39;UBERON:0002346!1.99e-08!71;UBERON:0003075!1.99e-08!71;UBERON:0007284!1.99e-08!71;UBERON:0001017!6.06e-08!73;UBERON:0005743!6.06e-08!73;UBERON:0002020!1.22e-07!34;UBERON:0000073!1.99e-07!75;UBERON:0001016!1.99e-07!75;UBERON:0002791!2.58e-07!29;UBERON:0003528!2.58e-07!29;UBERON:0001893!2.58e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.34e-27,10;UBERON:0000411,2.34e-27,10;UBERON:0001950,2.34e-27,10;UBERON:0002619,1.14e-15,17;UBERON:0000956,1.76e-12,21;UBERON:0001869,1.76e-12,21;UBERON:0000203,1.76e-12,21;UBERON:0002616,1.55e-11,46;UBERON:0000955,3.02e-11,47;UBERON:0006238,3.02e-11,47;UBERON:0003528,6.44e-11,29;UBERON:0002791,6.44e-11,29;UBERON:0001893,6.44e-11,29;UBERON:0001049,5.69e-10,52;UBERON:0005068,5.69e-10,52;UBERON:0006241,5.69e-10,52;UBERON:0007135,5.69e-10,52;UBERON:0002780,1.54e-09,39;UBERON:0001890,1.54e-09,39;UBERON:0006240,1.54e-09,39;UBERON:0000073,1.58e-09,54;UBERON:0003080,2.92e-09,40;UBERON:0002020,4.09e-09,34;UBERON:0002346,1.01e-07,64;UBERON:0003075,1.01e-07,64;UBERON:0007284,1.01e-07,64;UBERON:0003056,2.86e-07,49 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.766124028511126,0,0.263772575460388,0.365950574409639,1.04182674111352,0.279182999001381,0,0.30559649555362,0.294628585473668,0.284743361598206,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,1.25668024088073,0,0,0,0,0.149790639404823,0,0.125654352112864,0.869121600961382,0,0.62336413367868,0.648965052271031,0.101839363850316,0,0,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,0.776110112217047,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.162137619091711,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0,0.342745537829186,0,0,0.193952487167626,0.0701358198903186,0,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0,0.178065603667255,0.488660878060728,0,0,0.485561272309963,1.209294227859,0.377210159511796,0.295301892880773,0.307435147943927,0.258428293168221,1.09060118843252,0.712994756769443,0.316036757935816,1.05418608574999,0,1.02131881726136,0,0,0,0.354680467284547,0.891844088010353,0,0.304464949114599,0,0.21183207086382,0,0,0.322928853391811,0.0603129249281559,0,0,0,0.18542530201051,0,0,0,0,0,0,0.169978429993855,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0.404593039154462,0.247960367176008,0,0.259229946583586,0,0,0.149516546043979,0,0,0.774958940866387,0.506868376472335,0.352071715937262,0,0.209718688851422,0,0,0.632022241256357,0,0.102710957164827,0.649604114888975,0.537080087002444,0.198681354781265,1.32214994471966,0.738447635872886,1.61546319917036,1.06689529317,1.71404514732629,1.94915761479505,0.865906574762965,1.8700304349051,0,0,0,0,0,0,0.183151624267265,0,0,1.6942555278512,2.76195141904306,1.14579102687879,4.64003592327956,0.685082519770642,1.5107877947794,2.70009000092722,0.45032120322422,1.35942722695261,2.07104124700728,0,0.399024873401031,0,0.486213434136588,0,0,0,0,0,0,0,0,0.187283014939765,0.128050304809739,0.229741875822453,0,0,0,0,0.294397840268795,0,0,0,0,0.282328141245992,0.169229215783353,0.182927972872773,0.263069711437843,0,0.561142271657738,0,0,0.409231043169689,0,0.192906610981141,0,0,0,0,0.441182838239031,0.231867835620421 | |||
|short_description=p@chr2:92792283..92792288,+ | |||
}} |
Revision as of 00:55, 14 September 2013
Short description: | p@chr2:92792283..92792288, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:92792283..92792288, + |
Coexpression cluster: | MCL_coexpression_mm9:3376 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.34e-27 | 10 |
visual cortex | 2.34e-27 | 10 |
neocortex | 2.34e-27 | 10 |
regional part of cerebral cortex | 1.14e-15 | 17 |
cerebral cortex | 1.76e-12 | 21 |
cerebral hemisphere | 1.76e-12 | 21 |
pallium | 1.76e-12 | 21 |
regional part of brain | 1.55e-11 | 46 |
brain | 3.02e-11 | 47 |
future brain | 3.02e-11 | 47 |
brain grey matter | 6.44e-11 | 29 |
regional part of telencephalon | 6.44e-11 | 29 |
telencephalon | 6.44e-11 | 29 |
neural tube | 5.69e-10 | 52 |
neural rod | 5.69e-10 | 52 |
future spinal cord | 5.69e-10 | 52 |
neural keel | 5.69e-10 | 52 |
regional part of forebrain | 1.54e-09 | 39 |
forebrain | 1.54e-09 | 39 |
future forebrain | 1.54e-09 | 39 |
regional part of nervous system | 1.58e-09 | 54 |
anterior neural tube | 2.92e-09 | 40 |
gray matter | 4.09e-09 | 34 |
neurectoderm | 1.01e-07 | 64 |
neural plate | 1.01e-07 | 64 |
presumptive neural plate | 1.01e-07 | 64 |
pre-chordal neural plate | 2.86e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.