FFCP PHASE1:Hg19::chr8:103250962..103250985,-: Difference between revisions
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{{FFCP | 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333503,1.84870251452567,1.73050624849516,0.252332849670158,0.109265571963696,0.633492505057185,1.32585478664576,0,1.74600309116205,0.752122617877125,0.303114792872958,0.267964130156178,0.829169439458779,0.103432995861895,0.426467963801962,0.23806443146374,0,0.0620747142958579,0.448527450322454,0.509177266225319,0,0.435433495793923,1.02669990325584,0.202056159043763,0.645499848534087,0,0.0814032686109745,0.213454691755431,1.9307228228694,0.628776414746108,0,0.122241444182866,0,0,0,3.20568492303233|short_description=p5@RRM2B}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=50484 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17296 | |||
|TSSclassifier=S | |||
|UniProt=B4E2N4 | |||
|association_with_transcript=17bp_to_ENST00000535248,uc003yko.2_5end | |||
|description=CAGE_peak_5_at_RRM2B_5end | |||
|id=chr8:103250962..103250985,- | |||
|ontology_enrichment_celltype=CL:0000766!1.24e-16!76;CL:0000557!7.08e-16!71;CL:0000763!8.38e-16!112;CL:0000049!8.38e-16!112;CL:0002009!5.72e-15!65;CL:0002057!3.03e-14!42;CL:0002194!6.55e-14!63;CL:0000576!6.55e-14!63;CL:0000040!6.55e-14!63;CL:0000559!6.55e-14!63;CL:0000839!5.26e-13!70;CL:0000144!1.15e-12!625;CL:0002371!1.32e-12!591;CL:0000134!3.14e-12!358;CL:0000860!9.11e-12!45;CL:0000048!1.52e-11!430;CL:0002320!3.17e-11!365;CL:0000034!3.74e-11!444;CL:0000723!8.03e-11!436;CL:0000219!2.89e-10!390;CL:0002032!4.41e-10!165;CL:0000837!4.41e-10!165;CL:0000037!4.49e-10!172;CL:0000566!4.49e-10!172;CL:0000988!1.41e-09!182;CL:0000738!5.43e-09!140;CL:0000063!6.21e-08!578;CL:0002031!1.05e-07!124;CL:0000012!1.05e-07!682;CL:0000548!4.79e-07!679;CL:0000004!4.79e-07!679;CL:0000255!4.79e-07!679;CL:0002087!6.18e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.74e-19;33!CL:0002057;8.74e-19;33!CL:0000473;6.33e-17;39!CL:0000234;6.33e-17;39!CL:0000576;4.91e-10;48!CL:0000766;5.98e-09;69!CL:0000763;2.44e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.26e-21,108;CL:0000049,1.26e-21,108;CL:0000766,3.77e-21,72;CL:0000557,1.25e-19,67;CL:0002009,5.35e-19,61;CL:0000473,9.21e-19,48;CL:0000234,9.21e-19,48;CL:0000134,5.77e-18,354;CL:0000860,6.04e-18,42;CL:0002057,6.04e-18,42;CL:0002194,1.59e-17,59;CL:0000576,1.59e-17,59;CL:0000040,1.59e-17,59;CL:0000559,1.59e-17,59;CL:0002320,3.90e-17,361;CL:0000839,1.49e-16,66;CL:0002032,1.05e-15,161;CL:0000837,1.05e-15,161;CL:0000988,1.07e-15,177;CL:0000037,3.64e-15,168;CL:0000048,7.67e-15,427;CL:0000219,1.06e-14,386;CL:0000723,2.86e-14,433;CL:0000034,3.85e-14,441;CL:0000738,1.15e-12,136;CL:0002031,1.95e-11,120;CL:0002087,1.39e-09,115 | |||
|ontology_enrichment_development_v019=CL:0002057;9.73e-14;42!CL:0000049;6.07e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.45e-17!112;UBERON:0002390!5.60e-17!102;UBERON:0003061!5.60e-17!102;UBERON:0001474!3.48e-16!86;UBERON:0002371!3.90e-16!80;UBERON:0004765!5.77e-15!101;UBERON:0001434!5.77e-15!101;UBERON:0003081!7.49e-11!216;UBERON:0002384!1.28e-10!375;UBERON:0002204!6.62e-10!167;UBERON:0002405!7.33e-10!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.27e-20,76;UBERON:0001474,2.55e-20,82;UBERON:0002390,2.64e-20,98;UBERON:0003061,2.64e-20,98;UBERON:0002193,2.51e-19,108;UBERON:0004765,2.95e-18,90;UBERON:0002405,4.22e-18,93;UBERON:0001434,6.19e-18,100;UBERON:0002384,3.30e-16,371;UBERON:0003081,2.91e-13,203;UBERON:0002204,1.21e-10,167;UBERON:0000926,8.42e-07,315;UBERON:0004120,8.42e-07,315;UBERON:0006603,8.42e-07,315 | |||
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| |||
|short_description=p5@RRM2B | |||
}} |
Revision as of 02:55, 14 September 2013
Short description: | p5@RRM2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_RRM2B_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_ENST00000535248, uc003yko.2_5end |
EntrezGene: | RRM2B |
HGNC: | 17296 |
UniProt: | B4E2N4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.26e-21 | 108 |
common myeloid progenitor | 1.26e-21 | 108 |
myeloid leukocyte | 3.77e-21 | 72 |
granulocyte monocyte progenitor cell | 1.25e-19 | 67 |
macrophage dendritic cell progenitor | 5.35e-19 | 61 |
defensive cell | 9.21e-19 | 48 |
phagocyte | 9.21e-19 | 48 |
mesenchymal cell | 5.77e-18 | 354 |
classical monocyte | 6.04e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.04e-18 | 42 |
monopoietic cell | 1.59e-17 | 59 |
monocyte | 1.59e-17 | 59 |
monoblast | 1.59e-17 | 59 |
promonocyte | 1.59e-17 | 59 |
connective tissue cell | 3.90e-17 | 361 |
myeloid lineage restricted progenitor cell | 1.49e-16 | 66 |
hematopoietic oligopotent progenitor cell | 1.05e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.05e-15 | 161 |
hematopoietic cell | 1.07e-15 | 177 |
hematopoietic stem cell | 3.64e-15 | 168 |
multi fate stem cell | 7.67e-15 | 427 |
motile cell | 1.06e-14 | 386 |
somatic stem cell | 2.86e-14 | 433 |
stem cell | 3.85e-14 | 441 |
leukocyte | 1.15e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 1.95e-11 | 120 |
nongranular leukocyte | 1.39e-09 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.27e-20 | 76 |
bone element | 2.55e-20 | 82 |
hematopoietic system | 2.64e-20 | 98 |
blood island | 2.64e-20 | 98 |
hemolymphoid system | 2.51e-19 | 108 |
skeletal element | 2.95e-18 | 90 |
immune system | 4.22e-18 | 93 |
skeletal system | 6.19e-18 | 100 |
connective tissue | 3.30e-16 | 371 |
lateral plate mesoderm | 2.91e-13 | 203 |
musculoskeletal system | 1.21e-10 | 167 |
mesoderm | 8.42e-07 | 315 |
mesoderm-derived structure | 8.42e-07 | 315 |
presumptive mesoderm | 8.42e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.