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FFCP PHASE1:Mm9::chr4:154932219..154932224,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=389|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:154932219..154932224,+|id=chr4:154932219..154932224,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.44e-13!71;UBERON:0003075!1.44e-13!71;UBERON:0007284!1.44e-13!71;UBERON:0000033!1.69e-13!63;UBERON:0003056!1.71e-13!49;UBERON:0001049!3.37e-12!52;UBERON:0005068!3.37e-12!52;UBERON:0006241!3.37e-12!52;UBERON:0007135!3.37e-12!52;UBERON:0000955!2.42e-11!50;UBERON:0006238!2.42e-11!50;UBERON:0002616!7.62e-11!49;UBERON:0003080!1.85e-10!40;UBERON:0002780!6.36e-10!39;UBERON:0001890!6.36e-10!39;UBERON:0006240!6.36e-10!39;UBERON:0000468!1.88e-08!333;UBERON:0002021!1.10e-07!10;UBERON:0000411!1.10e-07!10;UBERON:0001950!1.10e-07!10;UBERON:0000922!4.51e-07!328;UBERON:0004121!4.82e-07!102;UBERON:0000924!4.82e-07!102;UBERON:0006601!4.82e-07!102;UBERON:0002020!7.26e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.71e-13,49;UBERON:0002346,5.82e-13,64;UBERON:0003075,5.82e-13,64;UBERON:0007284,5.82e-13,64;UBERON:0001049,3.37e-12,52;UBERON:0005068,3.37e-12,52;UBERON:0006241,3.37e-12,52;UBERON:0007135,3.37e-12,52;UBERON:0000955,1.00e-11,47;UBERON:0006238,1.00e-11,47;UBERON:0010314,1.31e-11,92;UBERON:0000073,2.06e-11,54;UBERON:0002616,3.24e-11,46;UBERON:0010371,5.78e-11,73;UBERON:0003080,1.85e-10,40;UBERON:0002780,6.36e-10,39;UBERON:0001890,6.36e-10,39;UBERON:0006240,6.36e-10,39;UBERON:0000922,2.23e-08,320;UBERON:0002021,1.10e-07,10;UBERON:0000411,1.10e-07,10;UBERON:0001950,1.10e-07,10;UBERON:0002020,7.26e-07,34|phase1_expression=71.5865346558429,38.0383194326904,52.3249125297966,70.4741612344914,87.1558570106644,17.7952028226603,44.3864017131499,25.6955413648737,69.5496287429234,33.9393563166891,46.2288514208863,21.1396221337641,37.8353613147965,20.8060557757214,22.3183540416494,34.6232707236602,25.1842276126133,34.543107106727,28.6569166235994,18.2487550273153,55.2781385981954,73.574594839856,74.4419399045966,96.1554460988374,105.528269290898,57.997428375617,54.2760115160434,40.724062977633,181.282342161381,57.2108394555043,60.9758904302088,16.5107975099504,9.22597181376855,0,41.5946332441835,47.8755778632458,38.9963470461125,65.2909343949576,53.1308034276184,61.7758017889082,69.9995470756907,59.4249571913848,47.0945042440219,66.0958294371781,64.2729743931722,44.968954279612,15.6478268869608,73.6925028565909,32.5135550447018,45.302166484308,41.715953644358,43.1257693094915,59.0594773323232,34.0920206745332,39.9951620979532,43.734104126111,36.1032134322833,68.5843882728998,63.3250522490541,190.965743517204,93.1732163154083,20.6695164562171,32.9039074561122,41.8453368535851,41.5323872278129,26.9982443679518,48.8348180145,35.348084089583,53.6075295634829,104.494596268729,89.8087584970401,96.8356837128894,73.9909612187905,60.1429824145424,67.2835206548019,108.467816819982,48.450987639731,115.68472830518,86.7876912897776,67.1301204546687,106.217154222398,90.6389264768762,64.491272769319,136.751314237698,90.6093609316484,91.334861496837,185.510300081231,97.6733096124575,87.4637532998276,45.6452223044985,99.7133841133772,33.5565312022741,16.319312008986,17.810205324048,31.8390444549358,10.3046184032387,45.0826588622923,50.106514837949,89.8859575925926,52.6475966020407,85.069425545115,37.2146784501522,25.4805239706646,56.8853362522665,218.439460380315,212.568927133608,244.16830694214,56.7493882203728,19.9382170408322,87.5808620482466,118.143507527739,124.221915151354,121.764982551199,80.3351674145478,91.1312480301712,63.4616286214861,109.754565674062,68.2508964661983,73.4226758118396,48.5300549842228,41.518205470554,43.1538975290348,141.657738525773,159.272753574282,194.157097216073,153.018776069946,43.1334448221313,26.3957201637099,55.6567594580023,217.945380334017,217.312786338848,232.963168817251,243.701696909572,265.432644708883,228.774637060076,200.043477362545,73.9353781553296,67.4285780706704,130.152220593342,436.035525396774,102.795149940536,93.34025439999,101.915165469828,116.193414551336,107.293559161644,181.024686762493,147.205409283334,952.804514431795,107.999564459354,73.5622651852817,67.7411828031203,113.543389397484,88.6970725029657,62.3371378074678,81.2839438811377,105.289127146983,39.3239384895411,35.5140111818307,42.3403614099433,87.6142017825173,109.758196071153,108.037236876609,89.0160205800391,88.3471400545843,90.8633294906658,87.6652971709038,104.090079743052,82.669862395956,74.2164923109797,98.1721435192989,61.6933640643962,68.2753941276302,85.6245449635097,62.5401911423332,184.213994942175,226.595956459184,191.642894130603,88.3264892656238,97.6860187451371,91.9657220567337,63.4027909704699,78.4548910784802,94.9554247217596,112.423345032522,178.422927140736,167.992933818491,127.678286070537,107.834407846304,124.777015756237,191.448534043349,202.521352732588,179.22714592893,108.30037144421,96.0829991047819,67.6246414038483,84.7189523836507,90.5758115072812,66.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|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=389
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr4:154932219..154932224,+
|id=chr4:154932219..154932224,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.44e-13!71;UBERON:0003075!1.44e-13!71;UBERON:0007284!1.44e-13!71;UBERON:0000033!1.69e-13!63;UBERON:0003056!1.71e-13!49;UBERON:0001049!3.37e-12!52;UBERON:0005068!3.37e-12!52;UBERON:0006241!3.37e-12!52;UBERON:0007135!3.37e-12!52;UBERON:0000955!2.42e-11!50;UBERON:0006238!2.42e-11!50;UBERON:0002616!7.62e-11!49;UBERON:0003080!1.85e-10!40;UBERON:0002780!6.36e-10!39;UBERON:0001890!6.36e-10!39;UBERON:0006240!6.36e-10!39;UBERON:0000468!1.88e-08!333;UBERON:0002021!1.10e-07!10;UBERON:0000411!1.10e-07!10;UBERON:0001950!1.10e-07!10;UBERON:0000922!4.51e-07!328;UBERON:0004121!4.82e-07!102;UBERON:0000924!4.82e-07!102;UBERON:0006601!4.82e-07!102;UBERON:0002020!7.26e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.71e-13,49;UBERON:0002346,5.82e-13,64;UBERON:0003075,5.82e-13,64;UBERON:0007284,5.82e-13,64;UBERON:0001049,3.37e-12,52;UBERON:0005068,3.37e-12,52;UBERON:0006241,3.37e-12,52;UBERON:0007135,3.37e-12,52;UBERON:0000955,1.00e-11,47;UBERON:0006238,1.00e-11,47;UBERON:0010314,1.31e-11,92;UBERON:0000073,2.06e-11,54;UBERON:0002616,3.24e-11,46;UBERON:0010371,5.78e-11,73;UBERON:0003080,1.85e-10,40;UBERON:0002780,6.36e-10,39;UBERON:0001890,6.36e-10,39;UBERON:0006240,6.36e-10,39;UBERON:0000922,2.23e-08,320;UBERON:0002021,1.10e-07,10;UBERON:0000411,1.10e-07,10;UBERON:0001950,1.10e-07,10;UBERON:0002020,7.26e-07,34
|phase1_expression=71.5865346558429,38.0383194326904,52.3249125297966,70.4741612344914,87.1558570106644,17.7952028226603,44.3864017131499,25.6955413648737,69.5496287429234,33.9393563166891,46.2288514208863,21.1396221337641,37.8353613147965,20.8060557757214,22.3183540416494,34.6232707236602,25.1842276126133,34.543107106727,28.6569166235994,18.2487550273153,55.2781385981954,73.574594839856,74.4419399045966,96.1554460988374,105.528269290898,57.997428375617,54.2760115160434,40.724062977633,181.282342161381,57.2108394555043,60.9758904302088,16.5107975099504,9.22597181376855,0,41.5946332441835,47.8755778632458,38.9963470461125,65.2909343949576,53.1308034276184,61.7758017889082,69.9995470756907,59.4249571913848,47.0945042440219,66.0958294371781,64.2729743931722,44.968954279612,15.6478268869608,73.6925028565909,32.5135550447018,45.302166484308,41.715953644358,43.1257693094915,59.0594773323232,34.0920206745332,39.9951620979532,43.734104126111,36.1032134322833,68.5843882728998,63.3250522490541,190.965743517204,93.1732163154083,20.6695164562171,32.9039074561122,41.8453368535851,41.5323872278129,26.9982443679518,48.8348180145,35.348084089583,53.6075295634829,104.494596268729,89.8087584970401,96.8356837128894,73.9909612187905,60.1429824145424,67.2835206548019,108.467816819982,48.450987639731,115.68472830518,86.7876912897776,67.1301204546687,106.217154222398,90.6389264768762,64.491272769319,136.751314237698,90.6093609316484,91.334861496837,185.510300081231,97.6733096124575,87.4637532998276,45.6452223044985,99.7133841133772,33.5565312022741,16.319312008986,17.810205324048,31.8390444549358,10.3046184032387,45.0826588622923,50.106514837949,89.8859575925926,52.6475966020407,85.069425545115,37.2146784501522,25.4805239706646,56.8853362522665,218.439460380315,212.568927133608,244.16830694214,56.7493882203728,19.9382170408322,87.5808620482466,118.143507527739,124.221915151354,121.764982551199,80.3351674145478,91.1312480301712,63.4616286214861,109.754565674062,68.2508964661983,73.4226758118396,48.5300549842228,41.518205470554,43.1538975290348,141.657738525773,159.272753574282,194.157097216073,153.018776069946,43.1334448221313,26.3957201637099,55.6567594580023,217.945380334017,217.312786338848,232.963168817251,243.701696909572,265.432644708883,228.774637060076,200.043477362545,73.9353781553296,67.4285780706704,130.152220593342,436.035525396774,102.795149940536,93.34025439999,101.915165469828,116.193414551336,107.293559161644,181.024686762493,147.205409283334,952.804514431795,107.999564459354,73.5622651852817,67.7411828031203,113.543389397484,88.6970725029657,62.3371378074678,81.2839438811377,105.289127146983,39.3239384895411,35.5140111818307,42.3403614099433,87.6142017825173,109.758196071153,108.037236876609,89.0160205800391,88.3471400545843,90.8633294906658,87.6652971709038,104.090079743052,82.669862395956,74.2164923109797,98.1721435192989,61.6933640643962,68.2753941276302,85.6245449635097,62.5401911423332,184.213994942175,226.595956459184,191.642894130603,88.3264892656238,97.6860187451371,91.9657220567337,63.4027909704699,78.4548910784802,94.9554247217596,112.423345032522,178.422927140736,167.992933818491,127.678286070537,107.834407846304,124.777015756237,191.448534043349,202.521352732588,179.22714592893,108.30037144421,96.0829991047819,67.6246414038483,84.7189523836507,90.5758115072812,66.9095721753639,70.6352119677954,72.9194131019235,96.8682150781283,81.4421281883884,52.7685676215125,40.0428253718626,43.2429789249047,45.6470088141253,37.3262623354845,54.0236837845414,58.5639459097266,55.2376583905556,68.2589304722899,66.7184234047038,188.336350550834,68.4739343710046,72.7047778356926,47.2322501761099,44.4905585534342,55.9634484781506,144.846501090618,75.7965647081939,77.4083638099623,89.6254052892993,102.324948253787,62.9823527981227,100.93050373567,92.2982154367388,114.443114621095,151.703312409411,90.7297633661102,156.653328868246,153.862318842513,178.062991113841,120.633027151418,123.466590226847,80.1575765021029,62.913578157479,231.674501352384,188.124756980486,24.9181116972547,54.2812493489402,38.4920027687833,43.3387006169269,17.0184484208911,22.4630670075399,22.7254647564042,11.889214293131,42.100312974189,48.2222165553665,21.7408277870588,199.540537497942,83.8865903580867,121.084610493734,68.2496359691484,74.8964358295311,45.1333470355874,93.4705449196679,108.534156950346,79.2141334974772,57.2885672188699,69.1729082873837,67.1913562237375,79.9774204850512,91.2633288664886,57.5186899443185,34.7881408297496,34.0347292719017,161.027933521542,100.29402937544,143.458780315075,134.389320964808,107.113501119933,152.326970232168,155.498824469004,139.444946694486,98.0927739706309,124.345425597062,69.686973785368,47.3223545942048,88.4825058293562,55.0053875344781,84.0381301782081,58.5983012089869,163.520749349346,177.637439326068,51.9447477625472,77.8078492221349,61.2993885593746,72.1451190327967,52.3538892171526,59.9398813801089,52.6933132980951,48.283251051662,49.3373906481793,235.803642649733,95.849806055084,62.2157569408157,83.8121444777178,97.8533225347714,100.665141886988,111.937407499401,74.801377431429,103.131841141708,151.390288804814,90.0942003976042,79.4807043544708,95.0925232839705,107.217101816199,128.143333118727,127.739065419476,94.6154302748358,116.770452452525,64.3209661129113,79.4833830746888,78.0316710268,71.1434115456928,62.2541907637511,97.1053781239886,81.6552109460377,57.8147662251188,39.9229531338484,49.2729759857537,63.5833927960635,63.6541862122428,50.0793591742812,48.6961494525449,51.1188758643781,50.385724342452,47.6248616119631,53.2958673947954,46.9331894083488,14.8730588760623,58.4037206527687,67.8253850110877,90.7991091951295,97.4072047591634,82.0519276717348,82.7461943245194,188.591111117297,302.142235800131,248.575627713876,250.355339373016,342.675245593313,198.673930733486,246.258410549042,260.558685089477,199.942614231554,211.617504995624,215.906050000509,160.870388755474,81.0020493004093,122.586728931468,96.756473393181,147.5676664901,125.01358574601,96.8995733215042,109.198580336614,80.2298023979538,84.4008687291084,98.349968357413,81.675205820171,78.1906587373518,62.4245235947475,56.286759576501,72.8729347663103,70.2259015225824,71.5693207920346,77.0600634502183,67.8587021819572,104.575121977552,77.3794514854712,86.0754645709829,95.9286349773368,74.1581917672805,101.45291486212,102.073808863007,103.912536017948,86.0998081782764,113.911881146521,68.4524054576485,65.7024897445008,71.2062015115259,65.2284101392917,90.4732005501553,114.912865851455,99.654865197744,78.2130636735806,70.9679711975409,78.751136625667,65.8504653161997
|short_description=p@chr4:154932219..154932224,+
}}

Revision as of 04:41, 14 September 2013

Short description:p@chr4:154932219..154932224, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr4:154932219..154932224, +
Coexpression cluster:MCL_coexpression_mm9:389
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p@chr4:154932219..154932224+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G771.59
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I538.04
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I652.32
CD326+ enterocyte, pool1.CNhs13542.11848-124I370.47
CD326+ enterocyte, pool2.CNhs13197.11849-124I487.16
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I717.80
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I844.39
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E925.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E769.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F233.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E646.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F121.14
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E437.84
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E820.81
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A122.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A334.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A525.18
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A234.54
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A428.66
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A618.25
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A355.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H273.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I974.44
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D196.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2105.53
GP2+ M cell, pool1.CNhs13228.11845-124H958.00
GP2+ M cell, pool2.CNhs13231.11846-124I154.28
GP2+ M cell, pool3.CNhs13240.11847-124I240.72
Ileum epithelium, pool1.CNhs13199.10252-104B9181.28
Ileum epithelium, pool2.CNhs13232.10253-104C157.21
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C860.98
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I316.51
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F541.59
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F647.88
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F739.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G865.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H153.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H361.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G970.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H259.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H447.09
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D866.10
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D964.27
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B344.97
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B715.65
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C273.69
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B832.51
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C345.30
Mouse Astrocytes, donor2.CNhs12078.11552-120C441.72
Mouse Astrocytes, donor3.CNhs12107.11633-122C443.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A259.06
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I934.09
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A140.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C143.73
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E136.10
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C568.58
Mouse Granule cells, donor1.CNhs12131.11713-123C363.33
Mouse Granule cells, donor2.CNhs12357.11731-123E3190.97
Mouse Granule cells, donor3.CNhs12108.11636-122C793.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C620.67
Mouse Meningeal cells, donor3.CNhs12109.11639-122D132.90
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C741.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E741.53
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D227.00
Mouse Microglia, donor1.CNhs12629.11718-123C848.83
Mouse Microglia, donor2.CNhs12634.11736-123E835.35
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D553.61
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5104.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D989.81
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F196.84
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D573.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D260.14
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F267.28
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6108.47
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D348.45
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3115.68
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D786.79
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D467.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4106.22
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D890.64
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E464.49
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5136.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I690.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D691.33
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6185.51
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E197.67
Mouse Schwann, donor1.CNhs12507.11728-123D987.46
Mouse Schwann, donor2.CNhs12573.11746-123F945.65
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G399.71
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F733.56
Mouse hepatocyte, donor1.CNhs13078.11714-123C416.32
Mouse hepatocyte, donor3.CNhs12615.11637-122C817.81
Mouse hepatocyte, donor6.CNhs13090.11822-124F431.84
Mouse hepatocyte, donor8.CNhs13091.11824-124F610.30
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A745.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I750.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E389.89
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I852.65
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G685.07
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H137.21
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I825.48
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B656.89
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1218.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2212.57
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3244.17
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B656.75
accessory axillary lymph node, adult.CNhs10475.1063-29H919.94
adrenal gland, adult.CNhs10508.49-24D787.58
adrenal gland, embryo E14.CNhs11038.406-44C5118.14
adrenal gland, embryo E16.CNhs11004.1254-43D6124.22
adrenal gland, embryo E17.CNhs11043.1263-45I1121.76
adrenal gland, embryo E18.CNhs11026.1262-18F580.34
adrenal gland, neonate N00.CNhs11191.1311-23C191.13
adrenal gland, neonate N25.CNhs11223.1377-27I363.46
amnion, adult pregnant day17.5.CNhs10488.583-22A8109.75
aorta, adult.CNhs10498.46-23H168.25
bone (os femoris), adult.CNhs10483.56-12G273.42
bone (os femoris), neonate N02.CNhs11227.1985-43F548.53
bone (os femoris), neonate N16.CNhs11225.1525-43A641.52
bone (os femoris), neonate N20.CNhs11195.1350-25C343.15
cecum, adult.CNhs10467.37-13H4141.66
cerebellum, adult.CNhs10494.15-8B2159.27
cerebellum, neonate N30.CNhs11135.1395-42I2194.16
colon, adult.CNhs10468.36-18H7153.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C743.13
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D126.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D455.66
corpora quadrigemina, adult.CNhs10501.16-22A4217.95
corpus striatum, adult.CNhs10487.19-21D8217.31
corpus striatum, neonate N00.CNhs11226.630-43F1232.96
cortex, adult.CNhs10473.12-14D5243.70
cortex, neonate N30.CNhs11107.1392-42F2265.43
diencephalon, adult.CNhs10482.20-12F2228.77
diencephalon, neonate N30.CNhs11201.1388-42B2200.04
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B173.94
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A267.43
epididymis, adult.CNhs10490.58-23B2130.15
eyeball, adult.CNhs10484.31-12G4436.04
eyeball, embryo E12.CNhs11016.345-16C6102.80
eyeball, embryo E14.CNhs10521.399-16E293.34
eyeball, embryo E15.CNhs10593.426-16C9101.92
eyeball, embryo E17.CNhs11023.1261-18D4116.19
eyeball, neonate N00.CNhs11207.633-15C6107.29
eyeball, neonate N01.CNhs11140.1532-43E7181.02
eyeball, neonate N02.CNhs11205.1551-44G8147.21
eyeball, neonate N16.CNhs11188.777-19A2952.80
forelimb, embryo E11.CNhs10596.335-25E2108.00
forelimb, embryo E12.CNhs10600.359-14H273.56
forelimb, embryo E13.CNhs10589.384-1E267.74
forelimb, embryo E14.CNhs10577.413-26A8113.54
forelimb, embryo E15.CNhs11007.437-20E788.70
forelimb, embryo E17.CNhs10598.1517-43C462.34
forelimb, embryo E18.CNhs11008.1520-43B581.28
gonad, embryo E13.CNhs11044.1564-45I6105.29
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C839.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D235.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D542.34
heart, embryo E11.CNhs10586.331-24E987.61
heart, embryo E12.CNhs11015.353-12F5109.76
heart, embryo E13.CNhs11013.376-3I9108.04
heart, embryo E14.CNhs10597.403-26D489.02
heart, embryo E15.CNhs11017.431-16C888.35
heart, embryo E16.CNhs11021.457-17C690.86
heart, embryo E17.CNhs11025.479-18E587.67
heart, embryo E18.CNhs11030.1283-20G3104.09
heart, neonate N00.CNhs11213.639-21E382.67
heart, neonate N03.CNhs11221.1349-25I274.22
heart, neonate N10.CNhs11118.749-24G198.17
heart, neonate N16.CNhs11209.782-15G161.69
heart, neonate N20.CNhs11127.821-26I668.28
heart, neonate N25.CNhs11196.1351-25D385.62
heart, neonate N30.CNhs11202.1390-42D262.54
hippocampus, adult.CNhs10478.13-16E8184.21
hippocampus, neonate N00.CNhs11228.627-43G1226.60
intestinal mucosa, adult.CNhs10506.860-29I3191.64
intestine, adult.CNhs10496.178-9A388.33
intestine, embryo E12.CNhs11019.1251-16I597.69
intestine, embryo E13.CNhs11010.381-16D591.97
intestine, embryo E15.CNhs10602.976-16D863.40
intestine, embryo E16.CNhs10585.463-22H478.45
intestine, embryo E17.CNhs10582.482-18D394.96
intestine, embryo E18.CNhs10526.1289-20F7112.42
intestine, neonate N00.CNhs11126.644-26D1178.42
intestine, neonate N01.CNhs11192.1322-23E9167.99
intestine, neonate N06.CNhs11102.688-20B8127.68
intestine, neonate N07.CNhs11095.720-20F2107.83
intestine, neonate N10.CNhs11098.755-23A5124.78
intestine, neonate N20.CNhs11187.827-18D1191.45
intestine, neonate N25.CNhs11121.1352-25E3202.52
intestine, neonate N30.CNhs11131.1384-42G1179.23
kidney, embryo E14.CNhs10606.411-4I9108.30
kidney, embryo E15.CNhs10997.434-16F896.08
kidney, embryo E16.CNhs10584.464-22A567.62
kidney, embryo E17.CNhs11028.483-18I284.72
kidney, embryo E18.CNhs11001.1288-20C790.58
kidney, neonate N00.CNhs11214.646-21G766.91
kidney, neonate N10.CNhs11206.758-6D570.64
kidney, neonate N20.CNhs11113.832-19I172.92
kidney, neonate N25.CNhs11122.1353-25F396.87
kidney, neonate N30.CNhs11203.1385-42H181.44
liver, adult pregnant day01.CNhs10466.508-5B252.77
liver, embryo E12.CNhs10601.355-15F840.04
liver, embryo E13.CNhs10524.378-3H643.24
liver, embryo E14.CNhs10594.409-16E145.65
liver, embryo E15.CNhs10520.433-16D737.33
liver, embryo E16.CNhs10523.462-17F554.02
liver, embryo E17.CNhs10510.481-18A358.56
liver, embryo E18.CNhs10579.499-43G455.24
liver, neonate N00.CNhs11117.641-24F468.26
liver, neonate N03.CNhs11123.1345-25G266.72
liver, neonate N06.CNhs11101.684-20A8188.34
liver, neonate N07.CNhs11103.716-20H268.47
liver, neonate N10.CNhs11115.751-24B972.70
liver, neonate N20.CNhs11220.823-25A347.23
liver, neonate N25.CNhs11198.1368-26H144.49
liver, neonate N30.CNhs11106.1382-42D155.96
lung, adult.CNhs10474.28-22B1144.85
lung, embryo E12.CNhs10522.354-16G275.80
lung, embryo E14.CNhs10604.404-26F877.41
lung, embryo E15.CNhs11020.432-17C589.63
lung, embryo E16.CNhs10998.458-17B6102.32
lung, embryo E17.CNhs10605.480-44A662.98
lung, embryo E18.CNhs10583.1287-20I6100.93
lung, neonate N00.CNhs11224.640-42C692.30
lung, neonate N06.CNhs11212.683-20E5114.44
lung, neonate N07.CNhs11111.715-19A3151.70
lung, neonate N10.CNhs11219.750-23E690.73
lung, neonate N20.CNhs11109.822-18A4156.65
lung, neonate N25.CNhs11119.1359-25C7153.86
lung, neonate N30.CNhs11133.1394-42H2178.06
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1120.63
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1123.47
mammary gland, adult lactating day02.CNhs10480.595-22B680.16
mammary gland, adult pregnant day19.CNhs10476.588-5H262.91
medulla oblongata, adult.CNhs10477.17-12C2231.67
medulla oblongata, neonate N30.CNhs11200.1396-42A3188.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C724.92
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C254.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E138.49
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E243.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E317.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D722.46
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D822.73
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.89
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D442.10
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D548.22
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D621.74
olfactory brain, adult.CNhs10489.18-22I9199.54
ovary, adult.CNhs10507.91-2I783.89
ovary, embryo E18.CNhs11040.505-44H7121.08
ovary, neonate N00.CNhs11217.1299-22I468.25
oviduct, adult pregnant day01.CNhs10500.988-6G674.90
pancreas, adult.CNhs10486.34-16E445.13
pancreas, embryo E14.CNhs11012.405-44F493.47
pancreas, embryo E15.CNhs11042.1556-45F2108.53
pancreas, embryo E16.CNhs11003.460-26E579.21
pancreas, embryo E17.CNhs10599.1558-45G357.29
pancreas, embryo E18.CNhs10580.1535-43I769.17
pancreas, neonate N00.CNhs11105.645-26G967.19
pancreas, neonate N01.CNhs11138.1531-43D779.98
pancreas, neonate N02.CNhs11139.1539-43D891.26
pancreas, neonate N16.CNhs11136.787-43B657.52
pancreas, neonate N25.CNhs11094.1555-45E234.79
pancreas, neonate N30.CNhs11182.1548-44H534.03
pituitary gland, adult.CNhs10493.21-1G8161.03
pituitary gland, embryo E12.CNhs11018.346-16E6100.29
pituitary gland, embryo E13.CNhs11009.370-44C7143.46
pituitary gland, embryo E14.CNhs11037.398-44A5134.39
pituitary gland, embryo E15.CNhs10592.427-16B9107.11
pituitary gland, embryo E16.CNhs11036.449-43F6152.33
pituitary gland, embryo E17.CNhs11039.1265-44F5155.50
pituitary gland, neonate N00.CNhs11190.1308-22E9139.44
placenta, adult pregnant day10.CNhs10472.539-13I798.09
placenta, adult pregnant day17.CNhs10464.577-18G3124.35
prostate, adult.CNhs10470.859-1F869.69
skin, adult.CNhs10492.30-1C347.32
skin, neonate N00.CNhs11124.650-25G488.48
skin, neonate N03.CNhs11215.662-22H355.01
skin, neonate N06.CNhs11097.693-20I584.04
skin, neonate N10.CNhs11108.762-6C458.60
small intestine, neonate N16.CNhs11114.790-21I1163.52
spinal cord, adult.CNhs10505.24-13C9177.64
spleen, adult.CNhs10465.25-2G251.94
spleen, embryo E16.CNhs11035.461-43C177.81
spleen, embryo E18.CNhs11011.1271-21F261.30
spleen, neonate N10.CNhs11116.752-24D172.15
spleen, neonate N20.CNhs11112.824-19H152.35
spleen, neonate N25.CNhs11099.1354-25G359.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C652.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C948.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D349.34
stomach, adult.CNhs10503.33-1H6235.80
stomach, embryo E12.CNhs10588.356-43E395.85
stomach, embryo E15.CNhs10603.1252-16G862.22
stomach, embryo E16.CNhs11022.459-17D483.81
stomach, embryo E17.CNhs11006.1035-18D597.85
stomach, embryo E18.CNhs10999.1286-20C6100.67
stomach, neonate N03.CNhs11193.1340-24B8111.94
stomach, neonate N07.CNhs11210.718-18A974.80
stomach, neonate N25.CNhs11104.1355-25E4103.13
stomach, neonate N30.CNhs11134.1386-42I1151.39
submandibular gland, adult.CNhs10469.59-29C190.09
testis, adult.CNhs10504.57-7G579.48
testis, embryo E13.CNhs11031.389-23F595.09
testis, embryo E15.CNhs11034.443-27C5107.22
testis, embryo E16.CNhs11033.470-26G5128.14
testis, embryo E17.CNhs11029.486-18I5127.74
testis, embryo E18.CNhs11027.503-18G594.62
testis, neonate N00.CNhs11189.1300-22B7116.77
testis, neonate N07.CNhs11222.726-26I464.32
testis, neonate N10.CNhs11204.763-44D979.48
testis, neonate N20.CNhs11110.839-18H378.03
testis, neonate N30.CNhs11130.1391-42E271.14
thymus, adult.CNhs10471.38-12B562.25
thymus, embryo E14.CNhs11041.402-44I497.11
thymus, embryo E15.CNhs11005.430-45I281.66
thymus, embryo E16.CNhs11002.456-26C557.81
thymus, embryo E17.CNhs10581.478-18C139.92
thymus, embryo E18.CNhs10595.1273-19G449.27
thymus, neonate N02.CNhs11181.1541-43F863.58
thymus, neonate N03.CNhs11137.2104-43C763.65
thymus, neonate N06.CNhs11197.681-26C450.08
thymus, neonate N07.CNhs11211.713-19D348.70
thymus, neonate N10.CNhs11194.748-24E451.12
thymus, neonate N20.CNhs11186.820-7A250.39
thymus, neonate N25.CNhs11125.1362-25G747.62
thymus, neonate N30.CNhs11132.1393-42G253.30
tongue, adult.CNhs10499.32-1B446.93
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H314.87
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F758.40
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G567.83
urinary bladder, adult.CNhs10481.879-12E490.80
uterus, adult pregnant day19.CNhs10497.590-15F597.41
uterus, adult.CNhs10509.92-27E582.05
vagina, adult.CNhs10502.89-27D582.75
vesicular gland, adult.CNhs10491.51-27F8188.59
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1302.14
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2248.58
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3250.36
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7342.68
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4198.67
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5246.26
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6260.56
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7199.94
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8211.62
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9215.91
whole body, embryo E11.CNhs11014.324-5I8160.87
whole body, embryo E12.CNhs10587.857-27C981.00
whole body, embryo E13.CNhs10512.372-23H2122.59
whole body, embryo E14.5.CNhs10578.420-27D296.76
whole body, embryo E14.CNhs10519.395-14B1147.57
whole body, embryo E16.CNhs10514.453-14F2125.01
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G596.90
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5109.20
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G580.23
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G584.40
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G598.35
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G581.68
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G578.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G562.42
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G556.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G572.87
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G570.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G571.57
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G577.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G567.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5104.58
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G577.38
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G586.08
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G595.93
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G574.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5101.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5102.07
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5103.91
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G586.10
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5113.91
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G568.45
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G565.70
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G571.21
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G565.23
whole body, embryo E17.5.CNhs10513.490-9F990.47
whole body, embryo E17.CNhs10517.475-3I5114.91
whole body, embryo E18.CNhs10516.493-3B399.65
whole body, neonate N00.CNhs10525.657-19C278.21
whole body, neonate N01.CNhs10576.659-23C670.97
whole body, neonate N06.CNhs10515.692-21D178.75
whole body, neonate N10.CNhs10518.761-6B465.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate1.71e-1349
neurectoderm5.82e-1364
neural plate5.82e-1364
presumptive neural plate5.82e-1364
neural tube3.37e-1252
neural rod3.37e-1252
future spinal cord3.37e-1252
neural keel3.37e-1252
brain1.00e-1147
future brain1.00e-1147
structure with developmental contribution from neural crest1.31e-1192
regional part of nervous system2.06e-1154
regional part of brain3.24e-1146
ecto-epithelium5.78e-1173
anterior neural tube1.85e-1040
regional part of forebrain6.36e-1039
forebrain6.36e-1039
future forebrain6.36e-1039
embryo2.23e-08320
occipital lobe1.10e-0710
visual cortex1.10e-0710
neocortex1.10e-0710
gray matter7.26e-0734







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