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FFCP PHASE1:Mm9::chr4:6917606..6917681,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=252838|HGNC=|MCL_coexpression_id=118|UniProt=|association_with_transcript=0bp_to_ENSMUST00000150082,uc008rxu.1_5end|description=CAGE_peak_1_at_Tox_5end|id=chr4:6917606..6917681,-|ontology_enrichment_celltype=CL:0000084!5.13e-08!11;CL:0000827!5.13e-08!11;CL:0000791!7.14e-07!9;CL:0000789!7.14e-07!9;CL:0002420!7.14e-07!9;CL:0002419!7.14e-07!9;CL:0000790!7.14e-07!9|ontology_enrichment_celltype_v019_2=CL:0000084,4.41e-08,11;CL:0000827,4.41e-08,11;CL:0000791,6.30e-07,9;CL:0000789,6.30e-07,9;CL:0002420,6.30e-07,9;CL:0002419,6.30e-07,9;CL:0000790,6.30e-07,9;CL:0000542,9.57e-07,13;CL:0000051,9.57e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!3.58e-17!94;UBERON:0007811!7.40e-15!86;UBERON:0004177!9.04e-10!29;UBERON:0003056!1.26e-09!49;UBERON:0002370!1.75e-09!23;UBERON:0000974!1.75e-09!23;UBERON:0004807!1.75e-09!23;UBERON:0005058!1.75e-09!23;UBERON:0003351!1.75e-09!23;UBERON:0009113!1.75e-09!23;UBERON:0003295!1.75e-09!23;UBERON:0009722!1.75e-09!23;UBERON:0005562!1.75e-09!23;UBERON:0007690!1.75e-09!23;UBERON:0003408!7.24e-09!24;UBERON:0006562!1.56e-08!24;UBERON:0001557!1.56e-08!24;UBERON:0001042!1.56e-08!24;UBERON:0008814!1.56e-08!24;UBERON:0009145!1.56e-08!24;UBERON:0002780!8.28e-08!39;UBERON:0001890!8.28e-08!39;UBERON:0006240!8.28e-08!39;UBERON:0003080!1.44e-07!40;UBERON:0000033!5.32e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.03e-12,43;UBERON:0007811,2.52e-11,36;UBERON:0004177,3.43e-10,29;UBERON:0005057,3.43e-10,29;UBERON:0002370,6.22e-10,23;UBERON:0000974,6.22e-10,23;UBERON:0004807,6.22e-10,23;UBERON:0005058,6.22e-10,23;UBERON:0003351,6.22e-10,23;UBERON:0009113,6.22e-10,23;UBERON:0003295,6.22e-10,23;UBERON:0009722,6.22e-10,23;UBERON:0005562,6.22e-10,23;UBERON:0007690,6.22e-10,23;UBERON:0003056,8.39e-10,49;UBERON:0003408,2.73e-09,24;UBERON:0006562,7.13e-09,24;UBERON:0001557,7.13e-09,24;UBERON:0001042,7.13e-09,24;UBERON:0008814,7.13e-09,24;UBERON:0009145,7.13e-09,24;UBERON:0002780,5.78e-08,39;UBERON:0001890,5.78e-08,39;UBERON:0006240,5.78e-08,39;UBERON:0003080,1.02e-07,40|phase1_expression=10.089377367602,0.348975407639361,0.454999239389536,0.60492842261366,1.50268718983904,3.02182689441402,3.03696432774183,43.256313352928,121.64145593904,140.438715793196,17.4642327590015,10.2906085103984,47.0802007310816,43.8850420143367,0.999329285446988,1.01237633694913,0.699561878128147,2.99689057090326,3.56497527374921,1.69755860719212,7.65389611359628,33.2624686522966,18.2839852397255,2.3998863419011,1.83527424853736,0.57423196411502,1.7230479846363,2.37018355954478,1.90023419456374,4.53654233567875,3.10422714917427,0,0,0,5.77703239502549,3.32469290716985,5.71674197534634,0,0,0,0,0,0,0,0.202753862439029,0,2.34717403304412,0.218025156380447,0,0.194429899074283,0.55994568650145,0,0.167782606057736,46.423177088726,23.5265659399725,0,0.286533439938757,1.03134418455488,6.87875966922632,8.99284664762456,3.80298842103708,3.04960078862219,1.77858959222228,0,0.988866362566974,0,1.49800055259202,0.384218305321555,7.05089363697648,9.99043943654511,5.67877395648731,3.42781181284564,3.75476519617743,6.85948475603743,5.46319184803947,3.67687514644008,4.40463523997555,2.042997409363,4.45458946443106,15.5625819521629,15.6443870560121,14.5855743755893,2.23346399201105,4.50210088025344,4.12555268997387,2.94628585473668,4.8406371471695,5.77838282058432,0.302904773332736,0.755715601067855,3.76823835312181,0.860423876981386,0.679971333707751,0,0,2.24013443548668,2.94933282276679,0,0,0,16.0561498545416,0,0,0,0,0.253359865475099,0,5.48082622651488,47.1266948237853,1.7813056687779,2.25530924795977,0,0.230615497256059,0.753613202763113,2.23418543557839,0.125666591329675,0.247194967734374,0.722996784599558,0,5.50007289821191,2.42925670306433,0.969750506270444,1.86391761218122,0,0.209446706813455,6.13096932500619,1.43778149407104,0,0.508280908292259,2.39665023047716,3.20250421973039,4.64921102817598,6.60532416730651,8.43861009190091,3.1168206683934,3.40706652442291,4.68461073711455,2.11491850037158,2.0217820674694,1.89397670297827,8.71806967850115,7.12696523743766,7.74267158163002,6.93242162044289,14.0835553243249,12.811372028485,8.99536555773397,2.58703370739016,2.58681591519411,8.13156144721623,9.50136070485324,5.91828477554452,6.67313398141435,4.179025998266,6.37924622864625,2.9855140022774,0,0,0.284163499395593,3.10688658803253,3.28336483973535,2.52086886045421,2.13070262026689,1.18058539048442,1.3884040159864,2.09280550275367,0.804820204198858,1.75148013550754,0.493679549740441,1.31333971263276,0.648550476366846,1.60819986167866,1.75640092232841,0.671032093801859,2.73376933133365,5.04232600658494,5.28670052774077,3.17340679996253,5.11891801284562,6.73486348395272,6.95884291139304,7.46229041106367,7.11609740303585,7.22857379227725,5.69434873853414,5.10566759644434,4.02136334080431,9.35095418593409,6.82374304916921,2.69645822596266,4.32276099749388,6.77080329064848,0.948339504765408,2.74196430263349,5.63538678365402,2.64746726198909,1.16371492300575,2.17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|EntrezGene=252838
|HGNC=
|MCL_coexpression_id=118
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000150082,uc008rxu.1_5end
|description=CAGE_peak_1_at_Tox_5end
|id=chr4:6917606..6917681,-
|ontology_enrichment_celltype=CL:0000084!5.13e-08!11;CL:0000827!5.13e-08!11;CL:0000791!7.14e-07!9;CL:0000789!7.14e-07!9;CL:0002420!7.14e-07!9;CL:0002419!7.14e-07!9;CL:0000790!7.14e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000084,4.41e-08,11;CL:0000827,4.41e-08,11;CL:0000791,6.30e-07,9;CL:0000789,6.30e-07,9;CL:0002420,6.30e-07,9;CL:0002419,6.30e-07,9;CL:0000790,6.30e-07,9;CL:0000542,9.57e-07,13;CL:0000051,9.57e-07,13
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!3.58e-17!94;UBERON:0007811!7.40e-15!86;UBERON:0004177!9.04e-10!29;UBERON:0003056!1.26e-09!49;UBERON:0002370!1.75e-09!23;UBERON:0000974!1.75e-09!23;UBERON:0004807!1.75e-09!23;UBERON:0005058!1.75e-09!23;UBERON:0003351!1.75e-09!23;UBERON:0009113!1.75e-09!23;UBERON:0003295!1.75e-09!23;UBERON:0009722!1.75e-09!23;UBERON:0005562!1.75e-09!23;UBERON:0007690!1.75e-09!23;UBERON:0003408!7.24e-09!24;UBERON:0006562!1.56e-08!24;UBERON:0001557!1.56e-08!24;UBERON:0001042!1.56e-08!24;UBERON:0008814!1.56e-08!24;UBERON:0009145!1.56e-08!24;UBERON:0002780!8.28e-08!39;UBERON:0001890!8.28e-08!39;UBERON:0006240!8.28e-08!39;UBERON:0003080!1.44e-07!40;UBERON:0000033!5.32e-07!63
|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.03e-12,43;UBERON:0007811,2.52e-11,36;UBERON:0004177,3.43e-10,29;UBERON:0005057,3.43e-10,29;UBERON:0002370,6.22e-10,23;UBERON:0000974,6.22e-10,23;UBERON:0004807,6.22e-10,23;UBERON:0005058,6.22e-10,23;UBERON:0003351,6.22e-10,23;UBERON:0009113,6.22e-10,23;UBERON:0003295,6.22e-10,23;UBERON:0009722,6.22e-10,23;UBERON:0005562,6.22e-10,23;UBERON:0007690,6.22e-10,23;UBERON:0003056,8.39e-10,49;UBERON:0003408,2.73e-09,24;UBERON:0006562,7.13e-09,24;UBERON:0001557,7.13e-09,24;UBERON:0001042,7.13e-09,24;UBERON:0008814,7.13e-09,24;UBERON:0009145,7.13e-09,24;UBERON:0002780,5.78e-08,39;UBERON:0001890,5.78e-08,39;UBERON:0006240,5.78e-08,39;UBERON:0003080,1.02e-07,40
|phase1_expression=10.089377367602,0.348975407639361,0.454999239389536,0.60492842261366,1.50268718983904,3.02182689441402,3.03696432774183,43.256313352928,121.64145593904,140.438715793196,17.4642327590015,10.2906085103984,47.0802007310816,43.8850420143367,0.999329285446988,1.01237633694913,0.699561878128147,2.99689057090326,3.56497527374921,1.69755860719212,7.65389611359628,33.2624686522966,18.2839852397255,2.3998863419011,1.83527424853736,0.57423196411502,1.7230479846363,2.37018355954478,1.90023419456374,4.53654233567875,3.10422714917427,0,0,0,5.77703239502549,3.32469290716985,5.71674197534634,0,0,0,0,0,0,0,0.202753862439029,0,2.34717403304412,0.218025156380447,0,0.194429899074283,0.55994568650145,0,0.167782606057736,46.423177088726,23.5265659399725,0,0.286533439938757,1.03134418455488,6.87875966922632,8.99284664762456,3.80298842103708,3.04960078862219,1.77858959222228,0,0.988866362566974,0,1.49800055259202,0.384218305321555,7.05089363697648,9.99043943654511,5.67877395648731,3.42781181284564,3.75476519617743,6.85948475603743,5.46319184803947,3.67687514644008,4.40463523997555,2.042997409363,4.45458946443106,15.5625819521629,15.6443870560121,14.5855743755893,2.23346399201105,4.50210088025344,4.12555268997387,2.94628585473668,4.8406371471695,5.77838282058432,0.302904773332736,0.755715601067855,3.76823835312181,0.860423876981386,0.679971333707751,0,0,2.24013443548668,2.94933282276679,0,0,0,16.0561498545416,0,0,0,0,0.253359865475099,0,5.48082622651488,47.1266948237853,1.7813056687779,2.25530924795977,0,0.230615497256059,0.753613202763113,2.23418543557839,0.125666591329675,0.247194967734374,0.722996784599558,0,5.50007289821191,2.42925670306433,0.969750506270444,1.86391761218122,0,0.209446706813455,6.13096932500619,1.43778149407104,0,0.508280908292259,2.39665023047716,3.20250421973039,4.64921102817598,6.60532416730651,8.43861009190091,3.1168206683934,3.40706652442291,4.68461073711455,2.11491850037158,2.0217820674694,1.89397670297827,8.71806967850115,7.12696523743766,7.74267158163002,6.93242162044289,14.0835553243249,12.811372028485,8.99536555773397,2.58703370739016,2.58681591519411,8.13156144721623,9.50136070485324,5.91828477554452,6.67313398141435,4.179025998266,6.37924622864625,2.9855140022774,0,0,0.284163499395593,3.10688658803253,3.28336483973535,2.52086886045421,2.13070262026689,1.18058539048442,1.3884040159864,2.09280550275367,0.804820204198858,1.75148013550754,0.493679549740441,1.31333971263276,0.648550476366846,1.60819986167866,1.75640092232841,0.671032093801859,2.73376933133365,5.04232600658494,5.28670052774077,3.17340679996253,5.11891801284562,6.73486348395272,6.95884291139304,7.46229041106367,7.11609740303585,7.22857379227725,5.69434873853414,5.10566759644434,4.02136334080431,9.35095418593409,6.82374304916921,2.69645822596266,4.32276099749388,6.77080329064848,0.948339504765408,2.74196430263349,5.63538678365402,2.64746726198909,1.16371492300575,2.17421041659988,2.02356918797623,0.738050739898011,0.470996183524124,0.246794327843601,2.07516838961004,0.667380422864376,1.57247196090562,0.899448449539415,1.82574109249653,0.482354319504834,0.763877555344259,1.43848068725405,3.72911021582581,1.37280706594041,2.87536413054709,4.83783231969054,3.12037673114561,3.03094653536534,1.4351793081753,1.92977408545347,2.21703828199926,3.03186258832776,2.93336957595647,2.20668611507745,2.11221223459652,3.35012514883632,1.6663054862021,3.90267295715598,1.7339865851681,1.99318220683897,2.23236676120482,1.80249646187312,3.28101465545202,2.02508682014116,0,0,1.47529281905711,2.75936746304733,2.0871576698413,1.64096361229084,0,0.757412781613119,1.57754109708128,1.17131623288992,3.66219776145758,2.86762557543062,3.11918143715352,2.83076530788832,3.64329631507405,2.33804686329049,3.55759000151871,3.53453448063988,2.2710413633323,1.78065603667255,2.11753047159649,5.44401405809367,3.98235415019888,5.34117399540959,3.32555912661226,3.01768127609437,0.590603785761546,3.07435147943927,10.3371317267288,3.99887102425256,3.56497378384721,3.16036757935816,2.10837217149998,1.03135543248187,4.08527526904546,13.6846431463796,6.85601024048599,9.43082954139006,7.80297028026004,5.88617098086833,5.75921572107423,4.56697423671899,0,0.21183207086382,1.54369878638473,1.31909002353184,2.58343082713449,1.44751019827574,0.238744688006273,1.14898629821543,6.12109756922687,0.741701208042039,5.46786818553129,13.6215332855727,8.33375373163703,2.63715839806567,4.10082683163076,2.51655990527175,11.3885548095883,10.4963589242744,10.6413979829406,2.86401185404534,6.48488786841327,6.70954241518601,6.91234181259528,5.43629569637619,5.67742665740062,4.18079473792944,6.61227645802687,3.14107130380836,5.83267379813068,1.86401793926078,2.25477175473676,1.49516546043979,3.14371131868485,1.16670713006429,3.61647505737647,2.87225413334323,3.75543163666413,6.38001485735356,7.86445083192831,4.59009829569411,3.16833006883652,85.6390136902363,9.32535990334755,13.3524244314275,27.9329769402259,36.8794993075012,60.001769143942,59.6169429619045,62.7680490491953,59.9740712691997,60.8892385173449,77.9386411107777,96.5807598130946,92.7482153412776,109.396780441949,0.453460767230423,0,0,0,0.386379188064381,1.12609485270709,2.38097111547445,0.428736758158132,2.00628841614145,6.21227026878773,8.28585425712918,14.3223878359849,7.04598047609119,9.59115527678899,6.0431511791176,8.10027000278167,7.20513925158753,9.9691329976525,7.24864436452548,4.67043064128795,11.9707462020309,7.5122786531819,4.132814190161,2.93458427679175,1.83843508450014,3.33370091702423,1.64828045791115,3.20919209591815,2.52697211763797,2.5347929989024,3.77252682772152,4.40115085108447,4.28968521112624,4.53740204749345,2.85776214769844,3.36064545240081,5.40145817298374,3.70877310722976,3.38557516309114,2.40008476669791,3.19456451086807,3.33810665926249,2.76158191601424,3.29382831453657,4.39995961036718,3.65855945745545,2.89376682581627,4.34573164306758,1.12228454331548,2.01679530811096,4.0386837773981,2.04615521584845,3.71848418846318,4.82266527452853,6.99469618226249,2.33931608445408,5.15690529715916,5.92993829413414,2.42650561031467,2.55054619182464
|short_description=p1@Tox
}}

Revision as of 05:24, 14 September 2013

Short description:p1@Tox
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tox_5end
Coexpression cluster:MCL_coexpression_mm9:118
Association with transcript: 0bp_to_ENSMUST00000150082, uc008rxu.1_5end
EntrezGene:Tox
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tox

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G710.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E943.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7121.64
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2140.44
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E617.46
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F110.29
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E447.08
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E843.89
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.56
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.65
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H233.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I918.28
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C14.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.78
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I946.42
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A123.53
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C36.88
Mouse Granule cells, donor2.CNhs12357.11731-123E38.99
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.05
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.99
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.46
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.59
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.78
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.06
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.48
accessory axillary lymph node, adult.CNhs10475.1063-29H947.13
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C12.23
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F55.50
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H76.13
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.44
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F14.65
cortex, adult.CNhs10473.12-14D56.61
cortex, neonate N30.CNhs11107.1392-42F28.44
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.68
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.11
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C68.72
eyeball, embryo E14.CNhs10521.399-16E27.13
eyeball, embryo E15.CNhs10593.426-16C97.74
eyeball, embryo E17.CNhs11023.1261-18D46.93
eyeball, neonate N00.CNhs11207.633-15C614.08
eyeball, neonate N01.CNhs11140.1532-43E712.81
eyeball, neonate N02.CNhs11205.1551-44G89.00
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H28.13
forelimb, embryo E13.CNhs10589.384-1E29.50
forelimb, embryo E14.CNhs10577.413-26A85.92
forelimb, embryo E15.CNhs11007.437-20E76.67
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B56.38
gonad, embryo E13.CNhs11044.1564-45I62.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E93.11
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E31.75
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G15.04
intestinal mucosa, adult.CNhs10506.860-29I35.29
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I55.12
intestine, embryo E13.CNhs11010.381-16D56.73
intestine, embryo E15.CNhs10602.976-16D86.96
intestine, embryo E16.CNhs10585.463-22H47.46
intestine, embryo E17.CNhs10582.482-18D37.12
intestine, embryo E18.CNhs10526.1289-20F77.23
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E95.11
intestine, neonate N06.CNhs11102.688-20B84.02
intestine, neonate N07.CNhs11095.720-20F29.35
intestine, neonate N10.CNhs11098.755-23A56.82
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E34.32
intestine, neonate N30.CNhs11131.1384-42G16.77
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F82.74
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G72.17
kidney, neonate N10.CNhs11206.758-6D52.02
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F43.73
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G23.03
lung, embryo E14.CNhs10604.404-26F82.93
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A63.35
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C63.90
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C73.28
lung, neonate N30.CNhs11133.1394-42H22.03
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A31.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.66
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G65.44
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F45.34
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E53.02
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G910.34
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G84.09
pituitary gland, embryo E12.CNhs11018.346-16E613.68
pituitary gland, embryo E13.CNhs11009.370-44C76.86
pituitary gland, embryo E14.CNhs11037.398-44A59.43
pituitary gland, embryo E15.CNhs10592.427-16B97.80
pituitary gland, embryo E16.CNhs11036.449-43F65.89
pituitary gland, embryo E17.CNhs11039.1265-44F55.76
pituitary gland, neonate N00.CNhs11190.1308-22E94.57
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G42.58
skin, neonate N03.CNhs11215.662-22H31.45
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I16.12
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G25.47
spleen, embryo E16.CNhs11035.461-43C113.62
spleen, embryo E18.CNhs11011.1271-21F28.33
spleen, neonate N10.CNhs11116.752-24D12.64
spleen, neonate N20.CNhs11112.824-19H14.10
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C611.39
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.50
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D310.64
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E36.48
stomach, embryo E15.CNhs10603.1252-16G86.71
stomach, embryo E16.CNhs11022.459-17D46.91
stomach, embryo E17.CNhs11006.1035-18D55.44
stomach, embryo E18.CNhs10999.1286-20C65.68
stomach, neonate N03.CNhs11193.1340-24B84.18
stomach, neonate N07.CNhs11210.718-18A96.61
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I15.83
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C53.14
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I53.62
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B73.76
testis, neonate N07.CNhs11222.726-26I46.38
testis, neonate N10.CNhs11204.763-44D97.86
testis, neonate N20.CNhs11110.839-18H34.59
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B585.64
thymus, embryo E14.CNhs11041.402-44I49.33
thymus, embryo E15.CNhs11005.430-45I213.35
thymus, embryo E16.CNhs11002.456-26C527.93
thymus, embryo E17.CNhs10581.478-18C136.88
thymus, embryo E18.CNhs10595.1273-19G460.00
thymus, neonate N02.CNhs11181.1541-43F859.62
thymus, neonate N03.CNhs11137.2104-43C762.77
thymus, neonate N06.CNhs11197.681-26C459.97
thymus, neonate N07.CNhs11211.713-19D360.89
thymus, neonate N10.CNhs11194.748-24E477.94
thymus, neonate N20.CNhs11186.820-7A296.58
thymus, neonate N25.CNhs11125.1362-25G792.75
thymus, neonate N30.CNhs11132.1393-42G2109.40
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.32
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.05
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I84.67
whole body, embryo E12.CNhs10587.857-27C911.97
whole body, embryo E13.CNhs10512.372-23H27.51
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.54
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.36
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.40
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.72
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I56.99
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C25.16
whole body, neonate N01.CNhs10576.659-23C65.93
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B42.55





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
T cell4.41e-0811
pro-T cell4.41e-0811
mature alpha-beta T cell6.30e-079
alpha-beta T cell6.30e-079
immature T cell6.30e-079
mature T cell6.30e-079
immature alpha-beta T cell6.30e-079
lymphocyte9.57e-0713
common lymphoid progenitor9.57e-0713







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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