FFCP PHASE1:Hg19::chr8:59512733..59512738,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8439|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8017|TSSclassifier=N|UniProt=|association_with_transcript=0bp_to_ENST00000519227,ENST00000523982_5end|coexpression_cluster_id=C67|description=CAGE_peak_14_at_NSMAF_5end|id=chr8:59512733..59512738,-|ontology_enrichment_celltype=CL:0002194!2.68e-62!63;CL:0000576!2.68e-62!63;CL:0000040!2.68e-62!63;CL:0000559!2.68e-62!63;CL:0002009!3.28e-60!65;CL:0000839!1.66e-55!70;CL:0000557!1.21e-54!71;CL:0000766!1.15e-50!76;CL:0000763!5.72e-35!112;CL:0000049!5.72e-35!112;CL:0002057!1.90e-32!42;CL:0002087!3.89e-30!119;CL:0000860!5.20e-30!45;CL:0002031!1.15e-28!124;CL:0000738!1.17e-24!140;CL:0002032!1.24e-21!165;CL:0000837!1.24e-21!165;CL:0000037!1.75e-20!172;CL:0000566!1.75e-20!172;CL:0000988!5.43e-19!182;CL:0000235!4.77e-18!10;CL:0002619!1.99e-16!3;CL:0000134!1.63e-08!358;CL:0002320!3.26e-08!365;CL:0000840!5.12e-08!5;CL:0001029!5.12e-08!5;CL:0000219!3.72e-07!390|ontology_enrichment_celltype_v019=CL:0000235;4.00e-55;6!CL:0002619;5.08e-29;3!CL:0000473;3.57e-24;39!CL:0000234;3.57e-24;39!CL:0000840;4.93e-14;5!CL:0000766;1.33e-12;69!CL:0000576;5.92e-12;48!CL:0000990;1.54e-09;8!CL:0000860;1.54e-08;33!CL:0002057;1.54e-08;33!CL:0000451;6.78e-08;10!CL:0000738;6.16e-07;136|ontology_enrichment_celltype_v019_2=CL:0000235,4.01e-55,6;CL:0002194,2.87e-46,59;CL:0000576,2.87e-46,59;CL:0000040,2.87e-46,59;CL:0000559,2.87e-46,59;CL:0002009,1.09e-44,61;CL:0000839,3.73e-41,66;CL:0000557,1.65e-40,67;CL:0000766,1.50e-37,72;CL:0002619,5.09e-29,3;CL:0000763,3.05e-27,108;CL:0000049,3.05e-27,108;CL:0000473,2.98e-25,48;CL:0000234,2.98e-25,48;CL:0002087,1.33e-22,115;CL:0002031,1.50e-21,120;CL:0000738,1.06e-18,136;CL:0002032,2.27e-17,161;CL:0000837,2.27e-17,161;CL:0000037,1.58e-16,168;CL:0000988,1.53e-15,177;CL:0000840,4.72e-14,5;CL:0001029,4.72e-14,5;CL:0000990,1.50e-09,8;CL:0000451,6.63e-08,10;CL:0000860,3.35e-07,42;CL:0002057,3.35e-07,42|ontology_enrichment_development_v019=CL:0000049;3.28e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!7.72e-48!80;UBERON:0001474!4.40e-44!86;UBERON:0004765!2.63e-39!101;UBERON:0001434!2.63e-39!101;UBERON:0002390!3.32e-36!102;UBERON:0003061!3.32e-36!102;UBERON:0002193!2.05e-32!112;UBERON:0002405!2.10e-31!115;UBERON:0002204!3.38e-21!167;UBERON:0003081!1.06e-13!216;UBERON:0002384!8.36e-08!375|ontology_enrichment_uberon_v019=UBERON:0002171;3.29e-10;1!UBERON:0006518;3.29e-10;1!UBERON:0008949;3.29e-10;1!UBERON:0000101;3.29e-10;1!UBERON:0002167;3.29e-10;1|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.86e-35,76;UBERON:0001474,1.07e-32,82;UBERON:0004765,1.40e-29,90;UBERON:0002405,1.51e-28,93;UBERON:0002390,5.76e-27,98;UBERON:0003061,5.76e-27,98;UBERON:0001434,2.24e-26,100;UBERON:0002193,3.10e-24,108;UBERON:0002204,1.02e-14,167;UBERON:0003081,1.34e-11,203;UBERON:0002171,3.01e-10,1;UBERON:0006518,3.01e-10,1;UBERON:0008949,3.01e-10,1;UBERON:0000101,3.01e-10,1;UBERON:0002167,3.01e-10,1|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,70.0855434370963,49.8796245669228,60.787833961668,0.726991193897824,0,0,1.16214518452842,2.05583944010913,1.23882548358041,0.28769239232215,0.512321413058201,0,0,0,0,0.376484679085209,1.09162460023138,1.34834090667051,0.612167784741805,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0.75374599577023,0,0,0,1.84138817993782,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29818957461873,1.21890816109487,4.91944453919801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,21.4208795296036,14.9762729689112,12.3363864699644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.51366464488333,5.02257091432126,14.7583757638122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13574825135389,0,1.24271716604159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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8439 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8017 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000519227,ENST00000523982_5end | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_14_at_NSMAF_5end | |||
|id=chr8:59512733..59512738,- | |||
|ontology_enrichment_celltype=CL:0002194!2.68e-62!63;CL:0000576!2.68e-62!63;CL:0000040!2.68e-62!63;CL:0000559!2.68e-62!63;CL:0002009!3.28e-60!65;CL:0000839!1.66e-55!70;CL:0000557!1.21e-54!71;CL:0000766!1.15e-50!76;CL:0000763!5.72e-35!112;CL:0000049!5.72e-35!112;CL:0002057!1.90e-32!42;CL:0002087!3.89e-30!119;CL:0000860!5.20e-30!45;CL:0002031!1.15e-28!124;CL:0000738!1.17e-24!140;CL:0002032!1.24e-21!165;CL:0000837!1.24e-21!165;CL:0000037!1.75e-20!172;CL:0000566!1.75e-20!172;CL:0000988!5.43e-19!182;CL:0000235!4.77e-18!10;CL:0002619!1.99e-16!3;CL:0000134!1.63e-08!358;CL:0002320!3.26e-08!365;CL:0000840!5.12e-08!5;CL:0001029!5.12e-08!5;CL:0000219!3.72e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000235;4.00e-55;6!CL:0002619;5.08e-29;3!CL:0000473;3.57e-24;39!CL:0000234;3.57e-24;39!CL:0000840;4.93e-14;5!CL:0000766;1.33e-12;69!CL:0000576;5.92e-12;48!CL:0000990;1.54e-09;8!CL:0000860;1.54e-08;33!CL:0002057;1.54e-08;33!CL:0000451;6.78e-08;10!CL:0000738;6.16e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,4.01e-55,6;CL:0002194,2.87e-46,59;CL:0000576,2.87e-46,59;CL:0000040,2.87e-46,59;CL:0000559,2.87e-46,59;CL:0002009,1.09e-44,61;CL:0000839,3.73e-41,66;CL:0000557,1.65e-40,67;CL:0000766,1.50e-37,72;CL:0002619,5.09e-29,3;CL:0000763,3.05e-27,108;CL:0000049,3.05e-27,108;CL:0000473,2.98e-25,48;CL:0000234,2.98e-25,48;CL:0002087,1.33e-22,115;CL:0002031,1.50e-21,120;CL:0000738,1.06e-18,136;CL:0002032,2.27e-17,161;CL:0000837,2.27e-17,161;CL:0000037,1.58e-16,168;CL:0000988,1.53e-15,177;CL:0000840,4.72e-14,5;CL:0001029,4.72e-14,5;CL:0000990,1.50e-09,8;CL:0000451,6.63e-08,10;CL:0000860,3.35e-07,42;CL:0002057,3.35e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000049;3.28e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.72e-48!80;UBERON:0001474!4.40e-44!86;UBERON:0004765!2.63e-39!101;UBERON:0001434!2.63e-39!101;UBERON:0002390!3.32e-36!102;UBERON:0003061!3.32e-36!102;UBERON:0002193!2.05e-32!112;UBERON:0002405!2.10e-31!115;UBERON:0002204!3.38e-21!167;UBERON:0003081!1.06e-13!216;UBERON:0002384!8.36e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;3.29e-10;1!UBERON:0006518;3.29e-10;1!UBERON:0008949;3.29e-10;1!UBERON:0000101;3.29e-10;1!UBERON:0002167;3.29e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.86e-35,76;UBERON:0001474,1.07e-32,82;UBERON:0004765,1.40e-29,90;UBERON:0002405,1.51e-28,93;UBERON:0002390,5.76e-27,98;UBERON:0003061,5.76e-27,98;UBERON:0001434,2.24e-26,100;UBERON:0002193,3.10e-24,108;UBERON:0002204,1.02e-14,167;UBERON:0003081,1.34e-11,203;UBERON:0002171,3.01e-10,1;UBERON:0006518,3.01e-10,1;UBERON:0008949,3.01e-10,1;UBERON:0000101,3.01e-10,1;UBERON:0002167,3.01e-10,1 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,70.0855434370963,49.8796245669228,60.787833961668,0.726991193897824,0,0,1.16214518452842,2.05583944010913,1.23882548358041,0.28769239232215,0.512321413058201,0,0,0,0,0.376484679085209,1.09162460023138,1.34834090667051,0.612167784741805,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0.75374599577023,0,0,0,1.84138817993782,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29818957461873,1.21890816109487,4.91944453919801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,21.4208795296036,14.9762729689112,12.3363864699644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.51366464488333,5.02257091432126,14.7583757638122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13574825135389,0,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p14@NSMAF | |||
}} |
Revision as of 05:40, 14 September 2013
Short description: | p14@NSMAF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_NSMAF_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 0bp_to_ENST00000519227, ENST00000523982_5end |
EntrezGene: | NSMAF |
HGNC: | 8017 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 4.01e-55 | 6 |
monopoietic cell | 2.87e-46 | 59 |
monocyte | 2.87e-46 | 59 |
monoblast | 2.87e-46 | 59 |
promonocyte | 2.87e-46 | 59 |
macrophage dendritic cell progenitor | 1.09e-44 | 61 |
myeloid lineage restricted progenitor cell | 3.73e-41 | 66 |
granulocyte monocyte progenitor cell | 1.65e-40 | 67 |
myeloid leukocyte | 1.50e-37 | 72 |
adult endothelial progenitor cell | 5.09e-29 | 3 |
myeloid cell | 3.05e-27 | 108 |
common myeloid progenitor | 3.05e-27 | 108 |
defensive cell | 2.98e-25 | 48 |
phagocyte | 2.98e-25 | 48 |
nongranular leukocyte | 1.33e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 1.50e-21 | 120 |
leukocyte | 1.06e-18 | 136 |
hematopoietic oligopotent progenitor cell | 2.27e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.27e-17 | 161 |
hematopoietic stem cell | 1.58e-16 | 168 |
hematopoietic cell | 1.53e-15 | 177 |
immature conventional dendritic cell | 4.72e-14 | 5 |
common dendritic progenitor | 4.72e-14 | 5 |
conventional dendritic cell | 1.50e-09 | 8 |
dendritic cell | 6.63e-08 | 10 |
classical monocyte | 3.35e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.35e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.86e-35 | 76 |
bone element | 1.07e-32 | 82 |
skeletal element | 1.40e-29 | 90 |
immune system | 1.51e-28 | 93 |
hematopoietic system | 5.76e-27 | 98 |
blood island | 5.76e-27 | 98 |
skeletal system | 2.24e-26 | 100 |
hemolymphoid system | 3.10e-24 | 108 |
musculoskeletal system | 1.02e-14 | 167 |
lateral plate mesoderm | 1.34e-11 | 203 |
lower lobe of right lung | 3.01e-10 | 1 |
right lung lobe | 3.01e-10 | 1 |
lower lobe of lung | 3.01e-10 | 1 |
lobe of lung | 3.01e-10 | 1 |
right lung | 3.01e-10 | 1 |
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