FFCP PHASE1:Hg19::chr9:21974820..21974906,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1029 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1787 | |||
|TSSclassifier=S | |||
|UniProt=G3XAG3,A5X2G7,P42771 | |||
|association_with_transcript=0bp_to_ENST00000380151,ENST00000498124,NM_058197_5end | |||
|coexpression_cluster_id=C1550 | |||
|description=CAGE_peak_2_at_CDKN2A_5end | |||
|id=chr9:21974820..21974906,- | |||
|ontology_enrichment_celltype=CL:0000359!8.91e-16!32;CL:0000548!1.57e-13!679;CL:0000004!1.57e-13!679;CL:0000255!1.57e-13!679;CL:0000066!2.96e-13!254;CL:0000012!7.98e-13!682;CL:0000192!1.05e-12!42;CL:0000514!1.05e-12!42;CL:0000220!4.16e-10!246;CL:0002321!8.79e-10!248;CL:0000680!1.17e-09!57;CL:0000056!1.17e-09!57;CL:0000355!1.17e-09!57;CL:0000183!2.18e-09!59;CL:0000003!3.34e-09!722;CL:0000187!7.77e-09!54;CL:0000055!1.42e-08!180;CL:0002371!2.12e-07!591;CL:0000222!2.68e-07!119;CL:0000144!8.62e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.79e-17;32!CL:0000192;2.24e-11;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,7.87e-18,32;CL:0000066,5.19e-16,253;CL:0000192,2.97e-15,43;CL:0000514,2.97e-15,43;CL:0002321,1.33e-12,250;CL:0000680,2.13e-10,58;CL:0000056,2.13e-10,58;CL:0000355,2.13e-10,58;CL:0000187,1.79e-09,55;CL:0000222,1.38e-08,121;CL:0000393,3.46e-07,61;CL:0000211,3.46e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;2.24e-11;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!8.28e-18!79;UBERON:0007798!8.28e-18!79;UBERON:0001637!1.96e-17!42;UBERON:0003509!1.96e-17!42;UBERON:0004572!1.96e-17!42;UBERON:0000055!1.37e-15!69;UBERON:0001981!1.58e-15!60;UBERON:0007500!1.58e-15!60;UBERON:0004537!1.58e-15!60;UBERON:0006965!1.58e-15!60;UBERON:0004573!1.28e-13!33;UBERON:0004571!1.28e-13!33;UBERON:0004872!1.73e-13!84;UBERON:0000486!1.21e-11!82;UBERON:0000483!1.18e-10!309;UBERON:0000119!1.39e-10!312;UBERON:0003914!2.12e-10!118;UBERON:0000477!4.42e-10!286;UBERON:0000914!4.42e-10!83;UBERON:0002329!4.42e-10!83;UBERON:0003077!4.42e-10!83;UBERON:0003059!4.42e-10!83;UBERON:0007282!4.42e-10!83;UBERON:0009618!4.42e-10!83;UBERON:0007285!4.42e-10!83;UBERON:0004535!5.53e-10!110;UBERON:0002100!8.87e-10!216;UBERON:0001009!1.24e-09!113;UBERON:0000475!1.79e-09!365;UBERON:0004290!3.03e-09!70;UBERON:0005256!1.07e-08!143;UBERON:0001134!4.42e-08!61;UBERON:0002036!4.42e-08!61;UBERON:0003082!4.42e-08!61;UBERON:0004111!7.35e-08!241;UBERON:0000947!7.61e-08!21;UBERON:0010191!7.61e-08!21;UBERON:0003104!9.15e-08!238;UBERON:0009142!9.15e-08!238;UBERON:0002385!3.08e-07!63;UBERON:0001015!3.08e-07!63;UBERON:0000383!3.08e-07!63;UBERON:0000064!3.53e-07!219;UBERON:0000481!8.13e-07!347;UBERON:0001737!9.72e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.61e-13;42!UBERON:0003509;1.61e-13;42!UBERON:0004572;1.61e-13;42!UBERON:0004573;2.79e-13;33!UBERON:0004571;2.79e-13;33!UBERON:0007500;2.55e-10;56!UBERON:0001981;2.55e-10;56!UBERON:0004537;2.55e-10;56!UBERON:0002049;4.34e-09;75!UBERON:0007798;4.34e-09;75!UBERON:0000055;8.64e-09;65!UBERON:0003914;1.42e-08;74!UBERON:0010371;2.34e-08;31!UBERON:0000947;3.61e-08;21!UBERON:0010191;3.61e-08;21!UBERON:0000072;1.59e-07;37!UBERON:0001737;1.71e-07;9!UBERON:0001557;1.71e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,4.65e-19,42;UBERON:0003509,4.65e-19,42;UBERON:0004572,4.65e-19,42;UBERON:0002049,7.09e-18,78;UBERON:0007798,7.09e-18,78;UBERON:0000055,3.63e-16,68;UBERON:0007500,1.04e-15,59;UBERON:0001981,1.04e-15,59;UBERON:0004537,1.04e-15,59;UBERON:0006965,1.04e-15,59;UBERON:0004573,1.05e-14,33;UBERON:0004571,1.05e-14,33;UBERON:0004872,5.59e-13,83;UBERON:0000486,6.94e-13,83;UBERON:0003914,7.88e-12,117;UBERON:0004535,2.38e-11,109;UBERON:0001009,7.33e-11,112;UBERON:0007503,7.34e-11,78;UBERON:0002329,6.18e-10,71;UBERON:0003059,6.18e-10,71;UBERON:0007282,6.18e-10,71;UBERON:0004290,6.18e-10,71;UBERON:0009618,6.18e-10,71;UBERON:0002100,7.44e-10,199;UBERON:0007524,1.16e-09,73;UBERON:0003077,1.47e-09,72;UBERON:0007285,1.47e-09,72;UBERON:0001134,9.73e-09,62;UBERON:0002036,9.73e-09,62;UBERON:0003082,9.73e-09,62;UBERON:0000490,1.66e-08,148;UBERON:0000483,3.07e-08,306;UBERON:0000947,3.63e-08,21;UBERON:0010191,3.63e-08,21;UBERON:0002385,5.21e-08,64;UBERON:0001015,5.21e-08,64;UBERON:0000383,5.21e-08,64;UBERON:0000119,5.50e-08,309;UBERON:0003104,1.52e-07,160;UBERON:0009142,1.52e-07,160;UBERON:0001737,1.72e-07,9;UBERON:0005256,2.59e-07,122 | |||
|phase1_expression=10.3556676184217,7.92171938396638,10.8534891153898,19.0139266870948,46.0369927260106,15.7020934338066,15.1979926900986,95.3897008874515,14.3652095509911,0,0.697801167972428,10.2667444901181,16.881086606621,3.09415882400117,12.5931002776608,21.5144046864568,28.9293373451509,29.9427137058823,25.8604383358969,0.492484232307152,6.12002073732759,0,0,1.64249310087461,0.251085279189606,0.305653622991805,0.57470412614962,0.708397031823113,0,0,0.309632246632152,8.27479102031034,21.686826152034,11.4623743151704,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.501559486172034,0,0,0,0.222820913770347,0,0,0,0.384273959177026,0.520237390239513,0,0.276350017785848,0.579606171470105,0,0,0,0.113309342697566,0.383220493601921,0,0,0,0.651083453856419,0,0,0.127986611154418,0,0.236777252044017,0,0,0.267440195783507,0,0,0.670700859703636,1.66221330396589,0.361439152384566,1.50401373190767,0.144846518960824,15.905718941022,0.486634870302636,3.21418378357831,19.7339163741682,9.66182642624386,0.130979075497713,10.5645633604837,1.48313777113772,0,0,0,0,0,0,2.58391129576717,24.0865686629715,5.55424802572151,4.52246353539208,33.9794543330024,11.0047216776027,12.121708059135,14.9881720318211,17.0767806089621,9.37217715741077,38.6716144424781,78.3080268890068,30.263695135973,8.82391392830085,34.8361037589157,0.0892997282840798,0,0,0,0.949265659568129,9.52649068438118,0,0,30.9626777021199,8.44852317882041,19.7543598196744,66.6018179490491,4.01571269048339,8.15737279056221,3.36406560085384,5.33744978648525,94.4736710437723,0,5.11900553864815,1.47115712802113,3.17850598054356,1.72852777344,0.937285727335186,100.827704816194,35.9397247573003,91.0142464560468,0.822041490506354,0,0,23.4777296943127,0,12.1924421787403,7.12801714369232,2.47266929278557,0,12.9351265526923,0,0,18.8403598529244,2.19488810440419,5.21029252858333,1.20190447125277,3.97012641060074,1.4351170855109,1.2813443329114,1.48352330811693,0.600182192168805,3.29768093563004,1.54584324027377,1.8611685633159,1.85653965465393,2.53336213419116,1.00973509697646,1.01254888506529,0.80823028409406,0.710019185033229,2.82105875037393,0.169560592310488,28.2160845618413,24.0016586119934,66.2518615348599,0.121973706129595,0,0.116193942869518,0.310983165046111,0,0.36497735907583,21.9029345261742,20.5837100221723,6.90674606762403,36.2206983864944,56.3065995702277,53.0014464178501,44.5063581806188,50.3713052456477,51.7278732114928,45.1010449271281,47.9286650604415,57.7077998925504,51.606245327966,52.3256133447091,3.69077727312324,9.81692416624121,0,0,0,0,1.77236972004421,0,0,60.5634370353795,44.4488655904933,25.8524032492525,1.10581869652794,8.98107918037737,1.3032332212413,14.5590869939141,57.7325368101093,2.78232971940184,96.8621727445529,4.76409277611544,5.09284063834272,2.09279567458058,0.790204397959275,0,0,2.57404691653161,1.33768046059855,81.548435568496,12.9346238713122,17.2965618635711,0,0.581267877027924,0.766765358330422,3.94130590316755,8.4526496652697,1.24396869324463,0.288239906833923,0.50496973370552,0.253991577168676,17.9534560012391,17.582617081507,20.5286935227246,0.822619941626588,4.20480280981484,3.42991719156694,0.336393253036082,1.30788020649984,0.07333828582095,89.3267555886244,10.7296933755565,1.690605505112,7.97814349754611,4.16029747645464,2.57207374262142,2.83698264046557,9.85762062359568,0,3.25572963234866,2.46972101034231,3.90883421152482,0,0,94.0490856425909,282.376840586495,29.791951372253,0,0,2.10833939483032,35.9437283237374,0,1.42636905040718,26.3501978134994,13.9723899334261,8.41586527227509,0,0,0,0,3.81141936333695,0,0,0,0,0,0,0,0.49076596687656,3.50119364741774,8.95174578209127,1.66376689224646,4.63915370872621,1.10391690523754,0.468565659970853,45.1419149591578,286.533455110541,15.5209606938757,1.32845119707087,8.29661258437664,7.73264168765937,0.195801157462741,0.686286847621712,0,0,0,0.606255142892519,4.99306318531491,2.72151263996712,6.4508030032882,2.14846762603287,2.24528075546459,7.56020980608636,10.7458522304008,40.5351881281891,13.3576259800492,0.771048469013278,4.26148140751505,4.59912073677331,2.07701771673448,0.581051892299796,0,99.8522222110359,4.51196845785892,1.14814448164607,2.36718518408732,31.3387351753024,1.80479845162965,1.84836809050595,10.980896768476,48.225944135576,21.3214290363609,3.4120015221269,9.52524749548488,6.26156156696204,3.08454505380579,18.424357752982,20.569280728049,1.01950509218015,2.49322802678617,17.4622308683299,0,0,0,11.15249795379,2.27764876265012,0.515205058238611,42.9460789998031,34.0764234672028,68.9118645595407,76.7071090323095,4.82051789532479,0.773365746336976,0.154048617114644,0.15350367472613,0,0,0,0.255679882248303,0.267096106940212,26.2803015423955,16.1439656586689,6.25302291223462,11.0261981132549,42.7657905353503,14.4813679542094,18.8200062943362,35.4238617202502,57.4890512742384,17.3986598415015,68.9406095066582,36.0674714589818,3.349425324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| |||
|short_description=p2@CDKN2A | |||
}} |
Revision as of 08:37, 14 September 2013
Short description: | p2@CDKN2A |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CDKN2A_5end |
Coexpression cluster: | C1550_Osteoblast_Mesothelial_acute_leukemia_Prostate_Fibroblast_Lens |
Association with transcript: | 0bp_to_ENST00000380151, ENST00000498124, NM_058197_5end |
EntrezGene: | CDKN2A |
HGNC: | 1787 |
UniProt: | G3XAG3A5X2G7P42771 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 7.87e-18 | 32 |
epithelial cell | 5.19e-16 | 253 |
smooth muscle cell | 2.97e-15 | 43 |
smooth muscle myoblast | 2.97e-15 | 43 |
embryonic cell | 1.33e-12 | 250 |
muscle precursor cell | 2.13e-10 | 58 |
myoblast | 2.13e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.13e-10 | 58 |
muscle cell | 1.79e-09 | 55 |
mesodermal cell | 1.38e-08 | 121 |
electrically responsive cell | 3.46e-07 | 61 |
electrically active cell | 3.46e-07 | 61 |
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