FFCP PHASE1:Hg19::chrX:12885123..12885132,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51284|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15631|TSSclassifier=S|UniProt=Q9NYK1,B2R9N9|association_with_transcript=-69bp_to_ENST00000380659,NM_016562,uc004cvc.2_5end|coexpression_cluster_id=C2952|description=CAGE_peak_3_at_TLR7_5end|id=chrX:12885123..12885132,+|ontology_enrichment_celltype=CL:0002087!1.24e-39!119;CL:0000738!2.60e-37!140;CL:0002031!2.54e-33!124;CL:0002057!2.94e-32!42;CL:0002194!2.36e-31!63;CL:0000576!2.36e-31!63;CL:0000040!2.36e-31!63;CL:0000559!2.36e-31!63;CL:0002009!2.96e-31!65;CL:0000860!3.15e-29!45;CL:0000037!2.76e-28!172;CL:0000566!2.76e-28!172;CL:0000557!2.81e-27!71;CL:0000766!3.40e-27!76;CL:0000839!1.15e-26!70;CL:0000988!2.55e-25!182;CL:0002032!2.60e-25!165;CL:0000837!2.60e-25!165;CL:0000945!4.35e-22!24;CL:0000826!4.35e-22!24;CL:0000763!1.46e-16!112;CL:0000049!1.46e-16!112;CL:0000236!7.44e-16!14;CL:0002393!2.87e-10!9;CL:0002397!2.87e-10!9;CL:0000542!1.93e-08!53;CL:0000051!1.93e-08!53;CL:0000838!5.85e-08!52|ontology_enrichment_celltype_v019=CL:0000945;5.48e-34;24!CL:0000236;3.17e-23;13!CL:0000576;2.97e-17;48!CL:0000473;4.35e-17;39!CL:0000234;4.35e-17;39!CL:0000860;3.42e-13;33!CL:0002057;3.42e-13;33!CL:0000766;6.67e-12;69!CL:0000784;1.10e-10;3!CL:0002087;5.23e-10;104!CL:0002619;5.46e-10;3!CL:0000542;2.58e-09;53!CL:0000235;3.10e-09;6!CL:0000738;3.31e-09;136|ontology_enrichment_celltype_v019_2=CL:0002087,5.84e-41,115;CL:0002031,8.56e-39,120;CL:0000738,7.52e-37,136;CL:0000945,2.94e-34,24;CL:0000826,2.94e-34,24;CL:0002194,6.10e-30,59;CL:0000576,6.10e-30,59;CL:0000040,6.10e-30,59;CL:0000559,6.10e-30,59;CL:0002009,9.77e-29,61;CL:0000037,1.21e-27,168;CL:0000473,2.94e-27,48;CL:0000234,2.94e-27,48;CL:0002032,4.26e-26,161;CL:0000837,4.26e-26,161;CL:0000839,4.83e-26,66;CL:0000236,6.77e-26,14;CL:0000988,1.18e-25,177;CL:0000557,1.50e-25,67;CL:0000766,2.66e-23,72;CL:0000860,1.54e-20,42;CL:0002057,1.54e-20,42;CL:0000838,2.24e-13,52;CL:0000763,2.83e-13,108;CL:0000049,2.83e-13,108;CL:0000542,4.84e-13,53;CL:0000051,4.84e-13,53;CL:0000784,9.41e-11,3;CL:0002619,3.01e-10,3;CL:0000235,3.45e-09,6;CL:0002393,4.47e-08,9;CL:0002397,4.47e-08,9;CL:0000134,2.60e-07,354;CL:0002320,5.70e-07,361|ontology_enrichment_development_v019=CL:0002057;1.67e-13;42!CL:0000051;2.58e-09;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.34e-40!115;UBERON:0002390!8.72e-34!102;UBERON:0003061!8.72e-34!102;UBERON:0002193!1.48e-31!112;UBERON:0002371!1.81e-22!80;UBERON:0001474!7.55e-20!86;UBERON:0001049!6.71e-18!57;UBERON:0005068!6.71e-18!57;UBERON:0006241!6.71e-18!57;UBERON:0007135!6.71e-18!57;UBERON:0002405!4.03e-17!115;UBERON:0004765!1.73e-15!101;UBERON:0001434!1.73e-15!101;UBERON:0003080!9.98e-14!42;UBERON:0002616!3.53e-13!59;UBERON:0002780!5.67e-13!41;UBERON:0001890!5.67e-13!41;UBERON:0006240!5.67e-13!41;UBERON:0001893!1.40e-11!34;UBERON:0002020!2.14e-11!34;UBERON:0003528!2.14e-11!34;UBERON:0001017!2.37e-11!82;UBERON:0005743!4.83e-11!86;UBERON:0002791!7.58e-11!33;UBERON:0003075!1.67e-10!86;UBERON:0007284!1.67e-10!86;UBERON:0000955!1.69e-10!69;UBERON:0006238!1.69e-10!69;UBERON:0001869!6.97e-10!32;UBERON:0000178!1.08e-09!15;UBERON:0000179!1.08e-09!15;UBERON:0000463!1.08e-09!15;UBERON:0002346!1.42e-09!90;UBERON:0002298!3.07e-09!8;UBERON:0000073!5.20e-09!94;UBERON:0001016!5.20e-09!94;UBERON:0003081!6.76e-09!216;UBERON:0003056!7.43e-08!61;UBERON:0002619!8.39e-08!22;UBERON:0002308!2.79e-07!9;UBERON:0000125!2.79e-07!9|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.13e-26,108;UBERON:0002390,2.15e-26,98;UBERON:0003061,2.15e-26,98;UBERON:0002405,8.38e-23,93;UBERON:0002371,1.03e-21,76;UBERON:0001474,1.27e-19,82;UBERON:0004765,2.84e-17,90;UBERON:0001434,7.17e-15,100;UBERON:0003081,1.92e-08,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.27915072188527,3.69452652524756,4.32909297225236,0.393364276848904,0.767658796194425,0.464448369948228,0,0,0,1.93668001450754,0.284338464974843,0,0.553995408531877,0.200544447470142,0.217010870715852,4.70222495903841,1.94336199611388,3.8636335145128,0,0,0.970336244751265,0.232429036905685,1.23350366406548,0.929119112685311,0.28769239232215,1.2808035326455,0.709446689665756,0.689491361473237,1.29096936716765,0,0.376484679085209,0.272906150057846,0.449446968890169,1.53041946185451,0.962787081228281,0.639337125799041,2.30895910130701,2.19410023383795,2.98357325372886,0,0.56738522469114,1.24564449799115,1.25624332628372,2.08593167368081,1.52032191293582,0,0.736555271975129,0.632924774881769,1.47878700418359,2.76385589954557,2.51590374610051,2.13424399178341,3.15371474967163,5.14321877430656,0.855038231223746,1.19350006319454,2.19196984517561,3.51992488922645,5.46138611262132,8.89509253863555,4.69403244823158,3.60356388332411,5.17277195959035,7.93253847341835,4.77026877267682,2.27685187643779,1.76171156811282,0.764546456250458,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51284 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15631 | |||
|TSSclassifier=S | |||
|UniProt=Q9NYK1,B2R9N9 | |||
|association_with_transcript=-69bp_to_ENST00000380659,NM_016562,uc004cvc.2_5end | |||
|coexpression_cluster_id=C2952 | |||
|description=CAGE_peak_3_at_TLR7_5end | |||
|id=chrX:12885123..12885132,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.24e-39!119;CL:0000738!2.60e-37!140;CL:0002031!2.54e-33!124;CL:0002057!2.94e-32!42;CL:0002194!2.36e-31!63;CL:0000576!2.36e-31!63;CL:0000040!2.36e-31!63;CL:0000559!2.36e-31!63;CL:0002009!2.96e-31!65;CL:0000860!3.15e-29!45;CL:0000037!2.76e-28!172;CL:0000566!2.76e-28!172;CL:0000557!2.81e-27!71;CL:0000766!3.40e-27!76;CL:0000839!1.15e-26!70;CL:0000988!2.55e-25!182;CL:0002032!2.60e-25!165;CL:0000837!2.60e-25!165;CL:0000945!4.35e-22!24;CL:0000826!4.35e-22!24;CL:0000763!1.46e-16!112;CL:0000049!1.46e-16!112;CL:0000236!7.44e-16!14;CL:0002393!2.87e-10!9;CL:0002397!2.87e-10!9;CL:0000542!1.93e-08!53;CL:0000051!1.93e-08!53;CL:0000838!5.85e-08!52 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.48e-34;24!CL:0000236;3.17e-23;13!CL:0000576;2.97e-17;48!CL:0000473;4.35e-17;39!CL:0000234;4.35e-17;39!CL:0000860;3.42e-13;33!CL:0002057;3.42e-13;33!CL:0000766;6.67e-12;69!CL:0000784;1.10e-10;3!CL:0002087;5.23e-10;104!CL:0002619;5.46e-10;3!CL:0000542;2.58e-09;53!CL:0000235;3.10e-09;6!CL:0000738;3.31e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,5.84e-41,115;CL:0002031,8.56e-39,120;CL:0000738,7.52e-37,136;CL:0000945,2.94e-34,24;CL:0000826,2.94e-34,24;CL:0002194,6.10e-30,59;CL:0000576,6.10e-30,59;CL:0000040,6.10e-30,59;CL:0000559,6.10e-30,59;CL:0002009,9.77e-29,61;CL:0000037,1.21e-27,168;CL:0000473,2.94e-27,48;CL:0000234,2.94e-27,48;CL:0002032,4.26e-26,161;CL:0000837,4.26e-26,161;CL:0000839,4.83e-26,66;CL:0000236,6.77e-26,14;CL:0000988,1.18e-25,177;CL:0000557,1.50e-25,67;CL:0000766,2.66e-23,72;CL:0000860,1.54e-20,42;CL:0002057,1.54e-20,42;CL:0000838,2.24e-13,52;CL:0000763,2.83e-13,108;CL:0000049,2.83e-13,108;CL:0000542,4.84e-13,53;CL:0000051,4.84e-13,53;CL:0000784,9.41e-11,3;CL:0002619,3.01e-10,3;CL:0000235,3.45e-09,6;CL:0002393,4.47e-08,9;CL:0002397,4.47e-08,9;CL:0000134,2.60e-07,354;CL:0002320,5.70e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.67e-13;42!CL:0000051;2.58e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.34e-40!115;UBERON:0002390!8.72e-34!102;UBERON:0003061!8.72e-34!102;UBERON:0002193!1.48e-31!112;UBERON:0002371!1.81e-22!80;UBERON:0001474!7.55e-20!86;UBERON:0001049!6.71e-18!57;UBERON:0005068!6.71e-18!57;UBERON:0006241!6.71e-18!57;UBERON:0007135!6.71e-18!57;UBERON:0002405!4.03e-17!115;UBERON:0004765!1.73e-15!101;UBERON:0001434!1.73e-15!101;UBERON:0003080!9.98e-14!42;UBERON:0002616!3.53e-13!59;UBERON:0002780!5.67e-13!41;UBERON:0001890!5.67e-13!41;UBERON:0006240!5.67e-13!41;UBERON:0001893!1.40e-11!34;UBERON:0002020!2.14e-11!34;UBERON:0003528!2.14e-11!34;UBERON:0001017!2.37e-11!82;UBERON:0005743!4.83e-11!86;UBERON:0002791!7.58e-11!33;UBERON:0003075!1.67e-10!86;UBERON:0007284!1.67e-10!86;UBERON:0000955!1.69e-10!69;UBERON:0006238!1.69e-10!69;UBERON:0001869!6.97e-10!32;UBERON:0000178!1.08e-09!15;UBERON:0000179!1.08e-09!15;UBERON:0000463!1.08e-09!15;UBERON:0002346!1.42e-09!90;UBERON:0002298!3.07e-09!8;UBERON:0000073!5.20e-09!94;UBERON:0001016!5.20e-09!94;UBERON:0003081!6.76e-09!216;UBERON:0003056!7.43e-08!61;UBERON:0002619!8.39e-08!22;UBERON:0002308!2.79e-07!9;UBERON:0000125!2.79e-07!9 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.13e-26,108;UBERON:0002390,2.15e-26,98;UBERON:0003061,2.15e-26,98;UBERON:0002405,8.38e-23,93;UBERON:0002371,1.03e-21,76;UBERON:0001474,1.27e-19,82;UBERON:0004765,2.84e-17,90;UBERON:0001434,7.17e-15,100;UBERON:0003081,1.92e-08,203 | |||
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|short_description=p3@TLR7 | |||
}} |
Revision as of 10:41, 14 September 2013
Short description: | p3@TLR7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_TLR7_5end |
Coexpression cluster: | C2952_Dendritic_xeroderma_Monocytederived_B_CD14_choriocarcinoma_splenic |
Association with transcript: | -69bp_to_ENST00000380659, NM_016562, uc004cvc.2_5end |
EntrezGene: | TLR7 |
HGNC: | 15631 |
UniProt: | Q9NYK1B2R9N9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.13e-26 | 108 |
hematopoietic system | 2.15e-26 | 98 |
blood island | 2.15e-26 | 98 |
immune system | 8.38e-23 | 93 |
bone marrow | 1.03e-21 | 76 |
bone element | 1.27e-19 | 82 |
skeletal element | 2.84e-17 | 90 |
skeletal system | 7.17e-15 | 100 |
lateral plate mesoderm | 1.92e-08 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.