FFCP PHASE1:Hg19::chrX:19766152..19766184,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=30011|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13867|TSSclassifier=N|UniProt=Q5JPT1|association_with_transcript=-331bp_to_ENST00000432234_5end|description=CAGE_peak_17_at_SH3KBP1_5end|id=chrX:19766152..19766184,-|ontology_enrichment_celltype=CL:0000988!3.24e-48!182;CL:0000037!1.65e-46!172;CL:0000566!1.65e-46!172;CL:0000738!8.68e-46!140;CL:0000542!3.87e-42!53;CL:0000051!3.87e-42!53;CL:0000838!1.02e-40!52;CL:0002032!1.49e-39!165;CL:0000837!1.49e-39!165;CL:0002087!1.63e-39!119;CL:0002031!8.52e-33!124;CL:0000084!2.11e-26!25;CL:0000827!2.11e-26!25;CL:0000791!2.81e-17!18;CL:0000789!2.81e-17!18;CL:0002420!2.81e-17!18;CL:0002419!2.81e-17!18;CL:0000790!2.81e-17!18;CL:0000625!1.10e-14!11;CL:0000134!1.05e-12!358;CL:0000080!1.67e-12!6;CL:0002320!4.02e-12!365;CL:0000945!1.15e-11!24;CL:0000826!1.15e-11!24;CL:0000219!4.33e-10!390;CL:0000763!5.94e-09!112;CL:0000049!5.94e-09!112;CL:0000048!3.63e-08!430;CL:0000034!7.62e-08!444;CL:0000723!8.00e-08!436;CL:0000817!1.56e-07!3;CL:0000623!2.26e-07!3;CL:0000825!2.26e-07!3;CL:0002057!3.14e-07!42;CL:0000766!4.18e-07!76|ontology_enrichment_celltype_v019=CL:0000945;7.98e-27;24!CL:0000542;4.22e-14;53!CL:0000946;1.10e-09;1!CL:0000786;1.10e-09;1!CL:0000817;1.91e-09;1|ontology_enrichment_celltype_v019_2=CL:0000945,5.78e-27,24;CL:0000826,5.78e-27,24;CL:0000838,9.44e-25,52;CL:0000542,3.04e-24,53;CL:0000051,3.04e-24,53;CL:0000988,2.94e-17,177;CL:0000037,7.84e-13,168;CL:0000738,9.27e-13,136;CL:0000817,5.58e-12,3;CL:0002032,7.86e-12,161;CL:0000837,7.86e-12,161;CL:0002087,1.29e-11,115;CL:0002031,4.91e-11,120;CL:0000946,9.70e-10,1;CL:0000786,9.70e-10,1;CL:0000980,9.70e-10,1|ontology_enrichment_development_v019=CL:0000051;4.22e-14;53|ontology_enrichment_disease=DOID:2531!6.91e-15!51;DOID:0060083!6.91e-15!51;DOID:0060058!5.32e-13!10;DOID:1240!7.69e-09!39|ontology_enrichment_disease_v019=DOID:630;4.09e-10;1!DOID:0050177;4.09e-10;1!DOID:0050427;4.09e-10;1!DOID:2531;1.11e-09;51!DOID:0060083;1.11e-09;51!DOID:1240;1.88e-08;39!DOID:0060058;3.42e-08;10|ontology_enrichment_disease_v019_2=DOID:2531,1.30e-14,51;DOID:0060083,1.30e-14,51;DOID:630,4.09e-10,1;DOID:0050177,4.09e-10,1;DOID:0050427,4.09e-10,1;DOID:1240,1.58e-09,39;DOID:0060058,3.38e-08,10|ontology_enrichment_uberon=UBERON:0002384!2.48e-11!375;UBERON:0002390!5.46e-11!102;UBERON:0003061!5.46e-11!102;UBERON:0002193!4.38e-10!112;UBERON:0000178!8.86e-08!15;UBERON:0000179!8.86e-08!15;UBERON:0000463!8.86e-08!15|ontology_enrichment_uberon_v019=UBERON:0002370;2.13e-17;2!UBERON:0005058;2.13e-17;2!UBERON:0009113;2.13e-17;2!UBERON:0004177;1.03e-15;5!UBERON:0005057;1.03e-15;5!UBERON:0002331;3.42e-08;10!UBERON:0002390;5.30e-08;32|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.40e-11,7;UBERON:0005057,2.40e-11,7;UBERON:0002370,4.06e-09,4;UBERON:0005058,4.06e-09,4;UBERON:0009113,4.06e-09,4;UBERON:0003295,4.06e-09,4;UBERON:0005562,4.06e-09,4;UBERON:0002331,3.38e-08,10;UBERON:0000358,3.38e-08,10;UBERON:0000307,3.38e-08,10;UBERON:0000091,3.38e-08,10;UBERON:0000087,3.38e-08,10;UBERON:0007010,3.38e-08,10;UBERON:0007806,3.38e-08,10;UBERON:0008780,3.38e-08,10;UBERON:0005728,3.38e-08,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.89045796786888,5.09023654589664,4.09296062831132,0,0.767658796194425,0.154816123316076,0,0,0,1.31694240986513,0.995184627411951,0.880801318004542,0.553995408531877,0.200544447470142,0.434021741431704,0,0.32389366601898,0,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0,0.344745680736619,0,4.06279459783025,0.376484679085209,0,0,0.306083892370903,0,0.639337125799041,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0.434377689410233,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.411202997999018,0,0.32592226663359,0.473447805734733,0,0.111410456885174,0.294605907474837,0.443067789167242,0.541607727530031,0,0,0.493313713811028,0.276350017785848,0,0.741432815810302,0.267540828089713,0,0,0,0,0.506039384039006,0.637130828648193,0.651083453856419,0,0.602300476311091,0.639933055772092,0,0.710331756132051,0.821127996921047,0.403213486449465,0.802320587350522,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953962497221368,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85609409356116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,0.788123040807709,0.862510299438069,0.513372145118994,0,0,0,0,0,0.749007023947182,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=30011 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13867 | |||
|TSSclassifier=N | |||
|UniProt=Q5JPT1 | |||
|association_with_transcript=-331bp_to_ENST00000432234_5end | |||
|description=CAGE_peak_17_at_SH3KBP1_5end | |||
|id=chrX:19766152..19766184,- | |||
|ontology_enrichment_celltype=CL:0000988!3.24e-48!182;CL:0000037!1.65e-46!172;CL:0000566!1.65e-46!172;CL:0000738!8.68e-46!140;CL:0000542!3.87e-42!53;CL:0000051!3.87e-42!53;CL:0000838!1.02e-40!52;CL:0002032!1.49e-39!165;CL:0000837!1.49e-39!165;CL:0002087!1.63e-39!119;CL:0002031!8.52e-33!124;CL:0000084!2.11e-26!25;CL:0000827!2.11e-26!25;CL:0000791!2.81e-17!18;CL:0000789!2.81e-17!18;CL:0002420!2.81e-17!18;CL:0002419!2.81e-17!18;CL:0000790!2.81e-17!18;CL:0000625!1.10e-14!11;CL:0000134!1.05e-12!358;CL:0000080!1.67e-12!6;CL:0002320!4.02e-12!365;CL:0000945!1.15e-11!24;CL:0000826!1.15e-11!24;CL:0000219!4.33e-10!390;CL:0000763!5.94e-09!112;CL:0000049!5.94e-09!112;CL:0000048!3.63e-08!430;CL:0000034!7.62e-08!444;CL:0000723!8.00e-08!436;CL:0000817!1.56e-07!3;CL:0000623!2.26e-07!3;CL:0000825!2.26e-07!3;CL:0002057!3.14e-07!42;CL:0000766!4.18e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000945;7.98e-27;24!CL:0000542;4.22e-14;53!CL:0000946;1.10e-09;1!CL:0000786;1.10e-09;1!CL:0000817;1.91e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.78e-27,24;CL:0000826,5.78e-27,24;CL:0000838,9.44e-25,52;CL:0000542,3.04e-24,53;CL:0000051,3.04e-24,53;CL:0000988,2.94e-17,177;CL:0000037,7.84e-13,168;CL:0000738,9.27e-13,136;CL:0000817,5.58e-12,3;CL:0002032,7.86e-12,161;CL:0000837,7.86e-12,161;CL:0002087,1.29e-11,115;CL:0002031,4.91e-11,120;CL:0000946,9.70e-10,1;CL:0000786,9.70e-10,1;CL:0000980,9.70e-10,1 | |||
|ontology_enrichment_development_v019=CL:0000051;4.22e-14;53 | |||
|ontology_enrichment_disease=DOID:2531!6.91e-15!51;DOID:0060083!6.91e-15!51;DOID:0060058!5.32e-13!10;DOID:1240!7.69e-09!39 | |||
|ontology_enrichment_disease_v019=DOID:630;4.09e-10;1!DOID:0050177;4.09e-10;1!DOID:0050427;4.09e-10;1!DOID:2531;1.11e-09;51!DOID:0060083;1.11e-09;51!DOID:1240;1.88e-08;39!DOID:0060058;3.42e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.30e-14,51;DOID:0060083,1.30e-14,51;DOID:630,4.09e-10,1;DOID:0050177,4.09e-10,1;DOID:0050427,4.09e-10,1;DOID:1240,1.58e-09,39;DOID:0060058,3.38e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002384!2.48e-11!375;UBERON:0002390!5.46e-11!102;UBERON:0003061!5.46e-11!102;UBERON:0002193!4.38e-10!112;UBERON:0000178!8.86e-08!15;UBERON:0000179!8.86e-08!15;UBERON:0000463!8.86e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.13e-17;2!UBERON:0005058;2.13e-17;2!UBERON:0009113;2.13e-17;2!UBERON:0004177;1.03e-15;5!UBERON:0005057;1.03e-15;5!UBERON:0002331;3.42e-08;10!UBERON:0002390;5.30e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.40e-11,7;UBERON:0005057,2.40e-11,7;UBERON:0002370,4.06e-09,4;UBERON:0005058,4.06e-09,4;UBERON:0009113,4.06e-09,4;UBERON:0003295,4.06e-09,4;UBERON:0005562,4.06e-09,4;UBERON:0002331,3.38e-08,10;UBERON:0000358,3.38e-08,10;UBERON:0000307,3.38e-08,10;UBERON:0000091,3.38e-08,10;UBERON:0000087,3.38e-08,10;UBERON:0007010,3.38e-08,10;UBERON:0007806,3.38e-08,10;UBERON:0008780,3.38e-08,10;UBERON:0005728,3.38e-08,10 | |||
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|short_description=p17@SH3KBP1 | |||
}} |
Revision as of 11:32, 14 September 2013
Short description: | p17@SH3KBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_SH3KBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -331bp_to_ENST00000432234_5end |
EntrezGene: | SH3KBP1 |
HGNC: | 13867 |
UniProt: | Q5JPT1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.78e-27 | 24 |
pro-B cell | 5.78e-27 | 24 |
lymphoid lineage restricted progenitor cell | 9.44e-25 | 52 |
lymphocyte | 3.04e-24 | 53 |
common lymphoid progenitor | 3.04e-24 | 53 |
hematopoietic cell | 2.94e-17 | 177 |
hematopoietic stem cell | 7.84e-13 | 168 |
leukocyte | 9.27e-13 | 136 |
precursor B cell | 5.58e-12 | 3 |
hematopoietic oligopotent progenitor cell | 7.86e-12 | 161 |
hematopoietic multipotent progenitor cell | 7.86e-12 | 161 |
nongranular leukocyte | 1.29e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 4.91e-11 | 120 |
antibody secreting cell | 9.70e-10 | 1 |
plasma cell | 9.70e-10 | 1 |
plasmablast | 9.70e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.40e-11 | 7 |
immune organ | 2.40e-11 | 7 |
thymus | 4.06e-09 | 4 |
hemolymphoid system gland | 4.06e-09 | 4 |
thymic region | 4.06e-09 | 4 |
pharyngeal gland | 4.06e-09 | 4 |
thymus primordium | 4.06e-09 | 4 |
umbilical cord | 3.38e-08 | 10 |
blastocyst | 3.38e-08 | 10 |
blastula | 3.38e-08 | 10 |
bilaminar disc | 3.38e-08 | 10 |
inner cell mass | 3.38e-08 | 10 |
cleaving embryo | 3.38e-08 | 10 |
connecting stalk | 3.38e-08 | 10 |
inner cell mass derived epiblast | 3.38e-08 | 10 |
extraembryonic mesoderm | 3.38e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.30e-14 | 51 |
immune system cancer | 1.30e-14 | 51 |
genetic disease | 4.09e-10 | 1 |
monogenic disease | 4.09e-10 | 1 |
xeroderma pigmentosum | 4.09e-10 | 1 |
leukemia | 1.58e-09 | 39 |
lymphoma | 3.38e-08 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.