FFCP PHASE1:Mm9::chr7:134281321..134281341,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20737|HGNC=|MCL_coexpression_id=909|UniProt=P15702,Q544C5|association_with_transcript=0bp_to_ENSMUST00000049931,ENSMUST00000143713,NM_001037810,NM_009259,uc009juh.1,uc009jui.1_5end|description=CAGE_peak_1_at_Spn_5end|id=chr7:134281321..134281341,-|ontology_enrichment_celltype=CL:0000988!5.11e-13!32;CL:0002032!5.11e-13!32;CL:0000037!5.11e-13!32;CL:0000566!5.11e-13!32;CL:0000837!5.11e-13!32;CL:0002031!5.15e-10!25;CL:0000049!6.07e-09!19;CL:0002320!4.54e-08!46;CL:0000134!4.54e-08!46;CL:0000763!3.74e-07!16|ontology_enrichment_celltype_v019_2=CL:0000988,2.03e-13,32;CL:0002032,2.03e-13,32;CL:0000037,2.03e-13,32;CL:0000837,2.03e-13,32;CL:0002031,1.63e-10,25;CL:0000049,2.22e-09,19;CL:0002320,9.83e-09,46;CL:0000134,9.83e-09,46;CL:0000763,1.74e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.29e-18!48;UBERON:0002390!2.40e-17!45;UBERON:0003061!2.40e-17!45;UBERON:0002405!2.68e-16!70;UBERON:0004177!6.80e-12!29;UBERON:0000926!4.66e-10!193;UBERON:0004120!4.66e-10!193;UBERON:0006603!4.66e-10!193;UBERON:0005057!5.88e-10!51;UBERON:0003408!2.02e-09!24;UBERON:0002370!3.61e-09!23;UBERON:0000974!3.61e-09!23;UBERON:0004807!3.61e-09!23;UBERON:0005058!3.61e-09!23;UBERON:0003351!3.61e-09!23;UBERON:0009113!3.61e-09!23;UBERON:0003295!3.61e-09!23;UBERON:0009722!3.61e-09!23;UBERON:0005562!3.61e-09!23;UBERON:0007690!3.61e-09!23;UBERON:0006562!7.23e-09!24;UBERON:0001557!7.23e-09!24;UBERON:0001042!7.23e-09!24;UBERON:0008814!7.23e-09!24;UBERON:0009145!7.23e-09!24;UBERON:0003081!9.16e-09!88;UBERON:0002384!4.54e-08!46;UBERON:0003104!8.18e-08!131;UBERON:0009142!8.18e-08!131;UBERON:0000077!1.34e-07!97;UBERON:0001004!1.43e-07!42;UBERON:0001041!1.82e-07!92;UBERON:0000065!2.56e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.07e-19,48;UBERON:0002405,2.07e-19,48;UBERON:0002390,1.69e-18,45;UBERON:0003061,1.69e-18,45;UBERON:0004177,1.02e-12,29;UBERON:0005057,1.02e-12,29;UBERON:0000077,4.85e-11,35;UBERON:0003408,4.32e-10,24;UBERON:0002370,7.96e-10,23;UBERON:0000974,7.96e-10,23;UBERON:0004807,7.96e-10,23;UBERON:0005058,7.96e-10,23;UBERON:0003351,7.96e-10,23;UBERON:0009113,7.96e-10,23;UBERON:0003295,7.96e-10,23;UBERON:0009722,7.96e-10,23;UBERON:0005562,7.96e-10,23;UBERON:0007690,7.96e-10,23;UBERON:0006562,1.69e-09,24;UBERON:0001557,1.69e-09,24;UBERON:0001042,1.69e-09,24;UBERON:0008814,1.69e-09,24;UBERON:0009145,1.69e-09,24;UBERON:0002384,9.83e-09,46;UBERON:0000926,1.08e-08,120;UBERON:0004120,1.08e-08,120;UBERON:0006603,1.08e-08,120;UBERON:0003081,5.30e-08,87;UBERON:0001041,6.32e-08,80;UBERON:0001004,6.85e-08,42;UBERON:0000065,1.27e-07,41;UBERON:0000072,3.60e-07,27;UBERON:0001474,9.20e-07,22;UBERON:0004765,9.20e-07,22;UBERON:0001434,9.20e-07,22|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,77.8613640352705,6.335492496825,11.0010327371337,6.50628279256919,9.49288692044503,100.666029199549,130.606081213982,70.6192695049205,46.1643609648803,47.570207712714,31.0730232877864,34.8270661358576,18.6731446791133,5.95303031057488,85.688090886364,72.3523415914851,4.63978026100879,5.04700418347774,0,0,0,1.33016393619462,4.03248207615889,1.55211357458713,26.6712882853045,16.6067492647834,31.6963362030877,0,0.166234645358492,0,172.853563494343,128.920331846427,155.486551960218,139.999094151381,163.930916390027,151.964740498751,0.755380907853464,0.101376931219515,1.10128051297009,0,0.872100625521786,2.85592037554813,0.972149495371417,0.419959264876088,1.43752564364972,7.3824346665404,48.5992635147601,69.9075102216325,0.514518872071894,0,0,0,0,0,0,0,5.39939830368839,5.93319817540185,2.8419204597844,2.99600110518405,1.92109152660777,0.103689612308478,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0.427115042397309,0.372798891650601,2.80186915332781,0.68014404096107,0,0.860423876981386,0,0,0,0.448026887097336,12.4995533917259,8.18065548374677,6.23486411046885,9.54016851177919,0,1.28326477414318,5.09610479413291,0,0.216491041011214,0,0,8.79215873836762,98.3963957859253,8.60964406575984,4.3371331691534,2.74018930480927,3.22861696158482,1.50722640552623,1.99900802130698,1.50799909595611,0,8.09756398751505,153.037625487328,14.235482795372,34.230435361361,38.3051449976825,1.86391761218122,0,0,5.62005521458901,140.543141045444,108.582394309807,149.307516810851,0,0.457500602818626,0,0,0,0,0,1.2220723662038,44.6621024490234,1.51633655060205,2.94618598241064,0.130120442962704,0,0.360124259610698,1.05493372485001,0.204109497453984,0.12811372028485,0.0937017245597288,0.776110112217047,0.646703978798527,0.189106080167819,0.351902248327898,0.657587197282725,0.556094498451196,0,0.61734640922383,1.79130840136644,124.291734154443,136.394390770799,150.322491180269,2.27838349789052,2.57978665979206,0,0.710234206755631,1.57411385397923,0.771335564436891,0.232533944750408,0.268273401399619,1.16765342367169,0.493679549740441,1.80584210487005,1.21603214318784,2.92399974850665,8.56245449635098,2.81833479396781,0.630869845692382,0.308713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| ||
|EntrezGene=20737 | |||
|HGNC= | |||
|MCL_coexpression_id=909 | |||
|UniProt=P15702,Q544C5 | |||
|association_with_transcript=0bp_to_ENSMUST00000049931,ENSMUST00000143713,NM_001037810,NM_009259,uc009juh.1,uc009jui.1_5end | |||
|description=CAGE_peak_1_at_Spn_5end | |||
|id=chr7:134281321..134281341,- | |||
|ontology_enrichment_celltype=CL:0000988!5.11e-13!32;CL:0002032!5.11e-13!32;CL:0000037!5.11e-13!32;CL:0000566!5.11e-13!32;CL:0000837!5.11e-13!32;CL:0002031!5.15e-10!25;CL:0000049!6.07e-09!19;CL:0002320!4.54e-08!46;CL:0000134!4.54e-08!46;CL:0000763!3.74e-07!16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.03e-13,32;CL:0002032,2.03e-13,32;CL:0000037,2.03e-13,32;CL:0000837,2.03e-13,32;CL:0002031,1.63e-10,25;CL:0000049,2.22e-09,19;CL:0002320,9.83e-09,46;CL:0000134,9.83e-09,46;CL:0000763,1.74e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.29e-18!48;UBERON:0002390!2.40e-17!45;UBERON:0003061!2.40e-17!45;UBERON:0002405!2.68e-16!70;UBERON:0004177!6.80e-12!29;UBERON:0000926!4.66e-10!193;UBERON:0004120!4.66e-10!193;UBERON:0006603!4.66e-10!193;UBERON:0005057!5.88e-10!51;UBERON:0003408!2.02e-09!24;UBERON:0002370!3.61e-09!23;UBERON:0000974!3.61e-09!23;UBERON:0004807!3.61e-09!23;UBERON:0005058!3.61e-09!23;UBERON:0003351!3.61e-09!23;UBERON:0009113!3.61e-09!23;UBERON:0003295!3.61e-09!23;UBERON:0009722!3.61e-09!23;UBERON:0005562!3.61e-09!23;UBERON:0007690!3.61e-09!23;UBERON:0006562!7.23e-09!24;UBERON:0001557!7.23e-09!24;UBERON:0001042!7.23e-09!24;UBERON:0008814!7.23e-09!24;UBERON:0009145!7.23e-09!24;UBERON:0003081!9.16e-09!88;UBERON:0002384!4.54e-08!46;UBERON:0003104!8.18e-08!131;UBERON:0009142!8.18e-08!131;UBERON:0000077!1.34e-07!97;UBERON:0001004!1.43e-07!42;UBERON:0001041!1.82e-07!92;UBERON:0000065!2.56e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.07e-19,48;UBERON:0002405,2.07e-19,48;UBERON:0002390,1.69e-18,45;UBERON:0003061,1.69e-18,45;UBERON:0004177,1.02e-12,29;UBERON:0005057,1.02e-12,29;UBERON:0000077,4.85e-11,35;UBERON:0003408,4.32e-10,24;UBERON:0002370,7.96e-10,23;UBERON:0000974,7.96e-10,23;UBERON:0004807,7.96e-10,23;UBERON:0005058,7.96e-10,23;UBERON:0003351,7.96e-10,23;UBERON:0009113,7.96e-10,23;UBERON:0003295,7.96e-10,23;UBERON:0009722,7.96e-10,23;UBERON:0005562,7.96e-10,23;UBERON:0007690,7.96e-10,23;UBERON:0006562,1.69e-09,24;UBERON:0001557,1.69e-09,24;UBERON:0001042,1.69e-09,24;UBERON:0008814,1.69e-09,24;UBERON:0009145,1.69e-09,24;UBERON:0002384,9.83e-09,46;UBERON:0000926,1.08e-08,120;UBERON:0004120,1.08e-08,120;UBERON:0006603,1.08e-08,120;UBERON:0003081,5.30e-08,87;UBERON:0001041,6.32e-08,80;UBERON:0001004,6.85e-08,42;UBERON:0000065,1.27e-07,41;UBERON:0000072,3.60e-07,27;UBERON:0001474,9.20e-07,22;UBERON:0004765,9.20e-07,22;UBERON:0001434,9.20e-07,22 | |||
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| |||
|short_description=p1@Spn | |||
}} |
Revision as of 11:54, 14 September 2013
Short description: | p1@Spn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Spn_5end |
Coexpression cluster: | MCL_coexpression_mm9:909 |
Association with transcript: | 0bp_to_ENSMUST00000049931, ENSMUST00000143713, NM_001037810, NM_009259, uc009juh.1, uc009jui.1_5end |
EntrezGene: | Spn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.03e-13 | 32 |
hematopoietic oligopotent progenitor cell | 2.03e-13 | 32 |
hematopoietic stem cell | 2.03e-13 | 32 |
hematopoietic multipotent progenitor cell | 2.03e-13 | 32 |
hematopoietic lineage restricted progenitor cell | 1.63e-10 | 25 |
common myeloid progenitor | 2.22e-09 | 19 |
connective tissue cell | 9.83e-09 | 46 |
mesenchymal cell | 9.83e-09 | 46 |
myeloid cell | 1.74e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.