FFCP PHASE1:Mm9::chr7:134475868..134475876,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1433|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:134475868..134475876,+|id=chr7:134475868..134475876,+|ontology_enrichment_celltype=CL:0000791!2.00e-09!9;CL:0000789!2.00e-09!9;CL:0002420!2.00e-09!9;CL:0002419!2.00e-09!9;CL:0000790!2.00e-09!9;CL:0000084!4.91e-09!11;CL:0000827!4.91e-09!11;CL:0000624!7.14e-09!8;CL:0000838!5.05e-08!12;CL:0000542!3.57e-07!13;CL:0000051!3.57e-07!13;CL:0000893!6.00e-07!6;CL:0002489!6.00e-07!6;CL:0000898!6.00e-07!6;CL:0000809!6.00e-07!6;CL:0000810!6.00e-07!6;CL:0000895!6.00e-07!6;CL:0000808!6.00e-07!6;CL:0000894!6.00e-07!6;CL:0000806!6.00e-07!6;CL:0000807!6.00e-07!6;CL:0000805!6.00e-07!6;CL:0002425!6.00e-07!6;CL:0002436!6.00e-07!6;CL:0002427!6.00e-07!6;CL:0002428!6.00e-07!6;CL:0002429!6.00e-07!6;CL:0002433!6.00e-07!6;CL:0002431!6.00e-07!6;CL:0002432!6.00e-07!6|ontology_enrichment_celltype_v019_2=CL:0000624,2.32e-08,8;CL:0000791,1.92e-07,9;CL:0000789,1.92e-07,9;CL:0002420,1.92e-07,9;CL:0002419,1.92e-07,9;CL:0000790,1.92e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!3.73e-18!29;UBERON:0005057!8.80e-17!51;UBERON:0003408!7.50e-16!24;UBERON:0002405!3.01e-15!70;UBERON:0002370!4.90e-15!23;UBERON:0000974!4.90e-15!23;UBERON:0004807!4.90e-15!23;UBERON:0005058!4.90e-15!23;UBERON:0003351!4.90e-15!23;UBERON:0009113!4.90e-15!23;UBERON:0003295!4.90e-15!23;UBERON:0009722!4.90e-15!23;UBERON:0005562!4.90e-15!23;UBERON:0007690!4.90e-15!23;UBERON:0002193!2.43e-14!48;UBERON:0006562!4.14e-14!24;UBERON:0001557!4.14e-14!24;UBERON:0001042!4.14e-14!24;UBERON:0008814!4.14e-14!24;UBERON:0009145!4.14e-14!24;UBERON:0002390!1.76e-13!45;UBERON:0003061!1.76e-13!45;UBERON:0001004!1.11e-12!42;UBERON:0000065!5.55e-12!41;UBERON:0000072!9.28e-12!27;UBERON:0001041!4.05e-11!92;UBERON:0005911!1.06e-10!69;UBERON:0000077!1.82e-10!97;UBERON:0002530!4.97e-10!65;UBERON:0002368!5.64e-10!60;UBERON:0003929!2.07e-09!55;UBERON:0000490!2.49e-09!66;UBERON:0003104!7.42e-09!131;UBERON:0009142!7.42e-09!131;UBERON:0000063!2.07e-08!35;UBERON:0003081!4.76e-08!88;UBERON:0001007!1.24e-07!128;UBERON:0001555!1.24e-07!128;UBERON:0007026!1.24e-07!128;UBERON:0004921!1.92e-07!126;UBERON:0004185!1.92e-07!126;UBERON:0000949!2.37e-07!72;UBERON:0004119!2.68e-07!130;UBERON:0000925!2.68e-07!130;UBERON:0006595!2.68e-07!130;UBERON:0001048!3.50e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.39e-24,23;UBERON:0000974,6.39e-24,23;UBERON:0004807,6.39e-24,23;UBERON:0005058,6.39e-24,23;UBERON:0003351,6.39e-24,23;UBERON:0009113,6.39e-24,23;UBERON:0003295,6.39e-24,23;UBERON:0009722,6.39e-24,23;UBERON:0005562,6.39e-24,23;UBERON:0007690,6.39e-24,23;UBERON:0006562,7.69e-23,24;UBERON:0003408,7.69e-23,24;UBERON:0001557,7.69e-23,24;UBERON:0001042,7.69e-23,24;UBERON:0008814,7.69e-23,24;UBERON:0009145,7.69e-23,24;UBERON:0004177,8.80e-22,29;UBERON:0005057,8.80e-22,29;UBERON:0000072,4.45e-20,27;UBERON:0000077,1.15e-17,35;UBERON:0002193,1.19e-16,48;UBERON:0002405,1.19e-16,48;UBERON:0002390,1.59e-15,45;UBERON:0003061,1.59e-15,45;UBERON:0000065,1.03e-14,41;UBERON:0007811,1.51e-14,36;UBERON:0001004,2.61e-14,42;UBERON:0003929,3.63e-12,55;UBERON:0000153,7.67e-12,43;UBERON:0000490,2.40e-11,66;UBERON:0002368,6.03e-11,60;UBERON:0005911,1.14e-10,69;UBERON:0001041,3.20e-10,80;UBERON:0002530,6.49e-10,65;UBERON:0000949,1.04e-08,72;UBERON:0003081,7.84e-07,87|phase1_expression=0,0,0,0,0,0,0,2.45334314538995,0.563154888606667,0.936258105287974,0.513653904676515,2.07407613387875,1.02720437958723,1.57356724354195,0.333109761815663,0,0,0.157731082679119,0.137114433605739,0,0.340173160604279,0.695036658406197,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,1.5626706890476,0.523523743973798,3.52938892818609,2.73218193983378,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.336093799142464,0.257259436035947,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,0.34255163915718,1.29468941823586,0,0.173485326766136,0,0,0,0,0,0.494389935468748,0,0,0,0,0.484875253135222,0,0,0.209446706813455,0,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.465067889500816,0.268273401399619,0.116765342367169,0,0.492502392237286,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0.296452627087149,0.166845105716094,0,0,0,0.482354319504834,0.763877555344259,0,0.324270453550071,0.549122826376163,1.43768206527355,0.744281895337007,0.312037673114561,1.01031551178845,0,0,0.923765950833023,0,0,0,0,0,0,0,0.630540576424764,0.221464689648775,0.159454768657487,0.163863314715738,0.690739927463582,1.01254341007058,0,1.63171705145613,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0.377210159511796,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0.619160603889667,0.740778109478847,0.376736914009382,0,1.14389086603261,0.169978429993855,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.632022241256357,0,0.308132871494482,0.909445760844565,1.07416017400489,0.993406773906324,1.44234539423963,2.06765338044408,2.3222283488074,2.209997392995,3.7305688500631,1.46186821109629,3.84847366561318,3.3894301632655,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0,0,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0|short_description=p@chr7:134475868..134475876,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1433 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:134475868..134475876,+ | |||
|id=chr7:134475868..134475876,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.00e-09!9;CL:0000789!2.00e-09!9;CL:0002420!2.00e-09!9;CL:0002419!2.00e-09!9;CL:0000790!2.00e-09!9;CL:0000084!4.91e-09!11;CL:0000827!4.91e-09!11;CL:0000624!7.14e-09!8;CL:0000838!5.05e-08!12;CL:0000542!3.57e-07!13;CL:0000051!3.57e-07!13;CL:0000893!6.00e-07!6;CL:0002489!6.00e-07!6;CL:0000898!6.00e-07!6;CL:0000809!6.00e-07!6;CL:0000810!6.00e-07!6;CL:0000895!6.00e-07!6;CL:0000808!6.00e-07!6;CL:0000894!6.00e-07!6;CL:0000806!6.00e-07!6;CL:0000807!6.00e-07!6;CL:0000805!6.00e-07!6;CL:0002425!6.00e-07!6;CL:0002436!6.00e-07!6;CL:0002427!6.00e-07!6;CL:0002428!6.00e-07!6;CL:0002429!6.00e-07!6;CL:0002433!6.00e-07!6;CL:0002431!6.00e-07!6;CL:0002432!6.00e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.32e-08,8;CL:0000791,1.92e-07,9;CL:0000789,1.92e-07,9;CL:0002420,1.92e-07,9;CL:0002419,1.92e-07,9;CL:0000790,1.92e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.73e-18!29;UBERON:0005057!8.80e-17!51;UBERON:0003408!7.50e-16!24;UBERON:0002405!3.01e-15!70;UBERON:0002370!4.90e-15!23;UBERON:0000974!4.90e-15!23;UBERON:0004807!4.90e-15!23;UBERON:0005058!4.90e-15!23;UBERON:0003351!4.90e-15!23;UBERON:0009113!4.90e-15!23;UBERON:0003295!4.90e-15!23;UBERON:0009722!4.90e-15!23;UBERON:0005562!4.90e-15!23;UBERON:0007690!4.90e-15!23;UBERON:0002193!2.43e-14!48;UBERON:0006562!4.14e-14!24;UBERON:0001557!4.14e-14!24;UBERON:0001042!4.14e-14!24;UBERON:0008814!4.14e-14!24;UBERON:0009145!4.14e-14!24;UBERON:0002390!1.76e-13!45;UBERON:0003061!1.76e-13!45;UBERON:0001004!1.11e-12!42;UBERON:0000065!5.55e-12!41;UBERON:0000072!9.28e-12!27;UBERON:0001041!4.05e-11!92;UBERON:0005911!1.06e-10!69;UBERON:0000077!1.82e-10!97;UBERON:0002530!4.97e-10!65;UBERON:0002368!5.64e-10!60;UBERON:0003929!2.07e-09!55;UBERON:0000490!2.49e-09!66;UBERON:0003104!7.42e-09!131;UBERON:0009142!7.42e-09!131;UBERON:0000063!2.07e-08!35;UBERON:0003081!4.76e-08!88;UBERON:0001007!1.24e-07!128;UBERON:0001555!1.24e-07!128;UBERON:0007026!1.24e-07!128;UBERON:0004921!1.92e-07!126;UBERON:0004185!1.92e-07!126;UBERON:0000949!2.37e-07!72;UBERON:0004119!2.68e-07!130;UBERON:0000925!2.68e-07!130;UBERON:0006595!2.68e-07!130;UBERON:0001048!3.50e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.39e-24,23;UBERON:0000974,6.39e-24,23;UBERON:0004807,6.39e-24,23;UBERON:0005058,6.39e-24,23;UBERON:0003351,6.39e-24,23;UBERON:0009113,6.39e-24,23;UBERON:0003295,6.39e-24,23;UBERON:0009722,6.39e-24,23;UBERON:0005562,6.39e-24,23;UBERON:0007690,6.39e-24,23;UBERON:0006562,7.69e-23,24;UBERON:0003408,7.69e-23,24;UBERON:0001557,7.69e-23,24;UBERON:0001042,7.69e-23,24;UBERON:0008814,7.69e-23,24;UBERON:0009145,7.69e-23,24;UBERON:0004177,8.80e-22,29;UBERON:0005057,8.80e-22,29;UBERON:0000072,4.45e-20,27;UBERON:0000077,1.15e-17,35;UBERON:0002193,1.19e-16,48;UBERON:0002405,1.19e-16,48;UBERON:0002390,1.59e-15,45;UBERON:0003061,1.59e-15,45;UBERON:0000065,1.03e-14,41;UBERON:0007811,1.51e-14,36;UBERON:0001004,2.61e-14,42;UBERON:0003929,3.63e-12,55;UBERON:0000153,7.67e-12,43;UBERON:0000490,2.40e-11,66;UBERON:0002368,6.03e-11,60;UBERON:0005911,1.14e-10,69;UBERON:0001041,3.20e-10,80;UBERON:0002530,6.49e-10,65;UBERON:0000949,1.04e-08,72;UBERON:0003081,7.84e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,2.45334314538995,0.563154888606667,0.936258105287974,0.513653904676515,2.07407613387875,1.02720437958723,1.57356724354195,0.333109761815663,0,0,0.157731082679119,0.137114433605739,0,0.340173160604279,0.695036658406197,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,1.5626706890476,0.523523743973798,3.52938892818609,2.73218193983378,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.336093799142464,0.257259436035947,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,0.34255163915718,1.29468941823586,0,0.173485326766136,0,0,0,0,0,0.494389935468748,0,0,0,0,0.484875253135222,0,0,0.209446706813455,0,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.465067889500816,0.268273401399619,0.116765342367169,0,0.492502392237286,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0.296452627087149,0.166845105716094,0,0,0,0.482354319504834,0.763877555344259,0,0.324270453550071,0.549122826376163,1.43768206527355,0.744281895337007,0.312037673114561,1.01031551178845,0,0,0.923765950833023,0,0,0,0,0,0,0,0.630540576424764,0.221464689648775,0.159454768657487,0.163863314715738,0.690739927463582,1.01254341007058,0,1.63171705145613,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0.377210159511796,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0.619160603889667,0.740778109478847,0.376736914009382,0,1.14389086603261,0.169978429993855,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.632022241256357,0,0.308132871494482,0.909445760844565,1.07416017400489,0.993406773906324,1.44234539423963,2.06765338044408,2.3222283488074,2.209997392995,3.7305688500631,1.46186821109629,3.84847366561318,3.3894301632655,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0,0,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr7:134475868..134475876,+ | |||
}} |
Revision as of 11:55, 14 September 2013
Short description: | p@chr7:134475868..134475876, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:134475868..134475876, + |
Coexpression cluster: | MCL_coexpression_mm9:1433 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 2.32e-08 | 8 |
mature alpha-beta T cell | 1.92e-07 | 9 |
alpha-beta T cell | 1.92e-07 | 9 |
immature T cell | 1.92e-07 | 9 |
mature T cell | 1.92e-07 | 9 |
immature alpha-beta T cell | 1.92e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.