FFCP PHASE1:Mm9::chr8:26125570..26125584,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=26|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:26125570..26125584,+|id=chr8:26125570..26125584,+|ontology_enrichment_celltype=CL:0000068!6.18e-13!3;CL:0002202!6.18e-13!3;CL:0000069!6.18e-13!3;CL:0002632!6.18e-13!3;CL:0002368!6.18e-13!3;CL:0000307!6.18e-13!3;CL:0000377!6.18e-13!3;CL:0000223!9.60e-07!20|ontology_enrichment_celltype_v019_2=CL:0000068,4.58e-44,3;CL:0002202,4.58e-44,3;CL:0000069,4.58e-44,3;CL:0002632,4.58e-44,3;CL:0002368,4.58e-44,3;CL:0000307,4.58e-44,3;CL:0000377,4.58e-44,3;CL:0000213,3.44e-16,1;CL:0002078,3.44e-16,1;CL:0000115,3.44e-16,1;CL:0002262,3.44e-16,1;CL:1000398,3.44e-16,1;CL:0000223,2.75e-12,20;CL:0000066,6.10e-10,25;CL:0002076,1.73e-09,15;CL:0002603,1.53e-08,2;CL:0000708,2.13e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003126!6.18e-13!3;UBERON:0001005!6.18e-13!3;UBERON:0007196!6.18e-13!3;UBERON:0001558!6.18e-13!3;UBERON:0000055!1.52e-07!5;UBERON:0001981!1.52e-07!5;UBERON:0002049!1.52e-07!5;UBERON:0007500!1.52e-07!5;UBERON:0007798!1.52e-07!5;UBERON:0004537!1.52e-07!5;UBERON:0006965!1.52e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0003126,4.58e-44,3;UBERON:0001005,4.58e-44,3;UBERON:0007196,4.58e-44,3;UBERON:0001558,4.58e-44,3;UBERON:0002394,3.44e-16,1;UBERON:0001281,3.44e-16,1;UBERON:0000353,3.44e-16,1;UBERON:0003497,3.44e-16,1;UBERON:0003909,3.44e-16,1;UBERON:0003928,3.44e-16,1;UBERON:0003835,3.44e-16,1;UBERON:0003513,3.44e-16,1;UBERON:0001280,3.44e-16,1;UBERON:0004647,3.44e-16,1;UBERON:0002294,3.44e-16,1;UBERON:0001173,3.44e-16,1;UBERON:0004912,3.44e-16,1;UBERON:0005171,3.44e-16,1;UBERON:0005178,1.87e-08,17;UBERON:0005181,1.87e-08,17;UBERON:0002224,1.87e-08,17;UBERON:0000915,1.87e-08,17;UBERON:0008947,1.87e-08,17;UBERON:0003258,1.87e-08,17;UBERON:0003210,2.13e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0.506884656097573,0.183546752161682,1.56478268869608,0,0.219686182734472,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,1.35537812827653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4641730141721,0,0.679971333707751,0,0,0,0,0,0.259786004602869,0,0,0,0,0,1.5154372870785,2.28023878927589,2.02209778005913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65954501176592,0,0,0.119372344003136,0,0,0,0,0,0,0.188368457004691,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr8:26125570..26125584,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=26 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:26125570..26125584,+ | |||
|id=chr8:26125570..26125584,+ | |||
|ontology_enrichment_celltype=CL:0000068!6.18e-13!3;CL:0002202!6.18e-13!3;CL:0000069!6.18e-13!3;CL:0002632!6.18e-13!3;CL:0002368!6.18e-13!3;CL:0000307!6.18e-13!3;CL:0000377!6.18e-13!3;CL:0000223!9.60e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,4.58e-44,3;CL:0002202,4.58e-44,3;CL:0000069,4.58e-44,3;CL:0002632,4.58e-44,3;CL:0002368,4.58e-44,3;CL:0000307,4.58e-44,3;CL:0000377,4.58e-44,3;CL:0000213,3.44e-16,1;CL:0002078,3.44e-16,1;CL:0000115,3.44e-16,1;CL:0002262,3.44e-16,1;CL:1000398,3.44e-16,1;CL:0000223,2.75e-12,20;CL:0000066,6.10e-10,25;CL:0002076,1.73e-09,15;CL:0002603,1.53e-08,2;CL:0000708,2.13e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003126!6.18e-13!3;UBERON:0001005!6.18e-13!3;UBERON:0007196!6.18e-13!3;UBERON:0001558!6.18e-13!3;UBERON:0000055!1.52e-07!5;UBERON:0001981!1.52e-07!5;UBERON:0002049!1.52e-07!5;UBERON:0007500!1.52e-07!5;UBERON:0007798!1.52e-07!5;UBERON:0004537!1.52e-07!5;UBERON:0006965!1.52e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,4.58e-44,3;UBERON:0001005,4.58e-44,3;UBERON:0007196,4.58e-44,3;UBERON:0001558,4.58e-44,3;UBERON:0002394,3.44e-16,1;UBERON:0001281,3.44e-16,1;UBERON:0000353,3.44e-16,1;UBERON:0003497,3.44e-16,1;UBERON:0003909,3.44e-16,1;UBERON:0003928,3.44e-16,1;UBERON:0003835,3.44e-16,1;UBERON:0003513,3.44e-16,1;UBERON:0001280,3.44e-16,1;UBERON:0004647,3.44e-16,1;UBERON:0002294,3.44e-16,1;UBERON:0001173,3.44e-16,1;UBERON:0004912,3.44e-16,1;UBERON:0005171,3.44e-16,1;UBERON:0005178,1.87e-08,17;UBERON:0005181,1.87e-08,17;UBERON:0002224,1.87e-08,17;UBERON:0000915,1.87e-08,17;UBERON:0008947,1.87e-08,17;UBERON:0003258,1.87e-08,17;UBERON:0003210,2.13e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0.506884656097573,0.183546752161682,1.56478268869608,0,0.219686182734472,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,1.35537812827653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4641730141721,0,0.679971333707751,0,0,0,0,0,0.259786004602869,0,0,0,0,0,1.5154372870785,2.28023878927589,2.02209778005913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65954501176592,0,0,0.119372344003136,0,0,0,0,0,0,0.188368457004691,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:26125570..26125584,+ | |||
}} |
Revision as of 15:24, 14 September 2013
Short description: | p@chr8:26125570..26125584, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:26125570..26125584, + |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 4.58e-44 | 3 |
epithelial cell of tracheobronchial tree | 4.58e-44 | 3 |
branched duct epithelial cell | 4.58e-44 | 3 |
epithelial cell of lower respiratory tract | 4.58e-44 | 3 |
respiratory epithelial cell | 4.58e-44 | 3 |
tracheal epithelial cell | 4.58e-44 | 3 |
tracheoblast | 4.58e-44 | 3 |
lining cell | 3.44e-16 | 1 |
meso-epithelial cell | 3.44e-16 | 1 |
endothelial cell | 3.44e-16 | 1 |
endothelial cell of sinusoid | 3.44e-16 | 1 |
endothelial cell of hepatic sinusoid | 3.44e-16 | 1 |
endodermal cell | 2.75e-12 | 20 |
epithelial cell | 6.10e-10 | 25 |
endo-epithelial cell | 1.73e-09 | 15 |
astrocyte of the cerebellum | 1.53e-08 | 2 |
leptomeningeal cell | 2.13e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
trachea | 4.58e-44 | 3 |
respiratory airway | 4.58e-44 | 3 |
tracheobronchial tree | 4.58e-44 | 3 |
lower respiratory tract | 4.58e-44 | 3 |
bile duct | 3.44e-16 | 1 |
hepatic sinusoid | 3.44e-16 | 1 |
parenchyma | 3.44e-16 | 1 |
abdomen blood vessel | 3.44e-16 | 1 |
sinusoid | 3.44e-16 | 1 |
digestive system duct | 3.44e-16 | 1 |
abdominal segment blood vessel | 3.44e-16 | 1 |
trunk blood vessel | 3.44e-16 | 1 |
liver parenchyma | 3.44e-16 | 1 |
liver lobule | 3.44e-16 | 1 |
biliary system | 3.44e-16 | 1 |
biliary tree | 3.44e-16 | 1 |
biliary bud | 3.44e-16 | 1 |
hepatic duct | 3.44e-16 | 1 |
thoracic cavity element | 1.87e-08 | 17 |
thoracic segment organ | 1.87e-08 | 17 |
thoracic cavity | 1.87e-08 | 17 |
thoracic segment of trunk | 1.87e-08 | 17 |
respiratory primordium | 1.87e-08 | 17 |
endoderm of foregut | 1.87e-08 | 17 |
blood-cerebrospinal fluid barrier | 2.13e-08 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.