FFCP PHASE1:Mm9::chr8:97202625..97202639,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:97202625..97202639,-|id=chr8:97202625..97202639,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,5.09e-11,3;CL:0002202,5.09e-11,3;CL:0000069,5.09e-11,3;CL:0002632,5.09e-11,3;CL:0002368,5.09e-11,3;CL:0000307,5.09e-11,3;CL:0000377,5.09e-11,3;CL:0000217,9.13e-08,2;CL:0000328,9.13e-08,2;CL:0002573,9.13e-08,2;CL:0002376,9.13e-08,2;CL:0000218,9.13e-08,2;CL:0000692,9.13e-08,2;CL:0002377,9.13e-08,2;CL:0002375,9.13e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!1.61e-09!17;UBERON:0005181!1.61e-09!17;UBERON:0002224!1.61e-09!17;UBERON:0000915!1.61e-09!17;UBERON:0008947!1.61e-09!17;UBERON:0003258!1.61e-09!17;UBERON:0002048!3.41e-07!14;UBERON:0000117!3.41e-07!14;UBERON:0000171!3.41e-07!14;UBERON:0000170!3.41e-07!14;UBERON:0005597!3.41e-07!14;UBERON:0000118!3.41e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0005178,5.61e-23,17;UBERON:0005181,5.61e-23,17;UBERON:0002224,5.61e-23,17;UBERON:0000915,5.61e-23,17;UBERON:0008947,5.61e-23,17;UBERON:0003258,5.61e-23,17;UBERON:0002048,5.93e-15,14;UBERON:0000117,5.93e-15,14;UBERON:0000171,5.93e-15,14;UBERON:0000170,5.93e-15,14;UBERON:0005597,5.93e-15,14;UBERON:0000118,5.93e-15,14;UBERON:0005153,4.28e-12,17;UBERON:0003126,5.09e-11,3;UBERON:0001005,5.09e-11,3;UBERON:0007196,5.09e-11,3;UBERON:0001558,5.09e-11,3;UBERON:0005157,4.29e-10,20;UBERON:0000065,2.59e-08,41;UBERON:0001004,4.58e-08,42;UBERON:0001896,3.30e-07,2;UBERON:0002298,3.30e-07,2;UBERON:0005290,3.30e-07,2;UBERON:0010096,3.30e-07,2;UBERON:0001041,7.04e-07,80|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0.47997726838022,0.22940928106717,0,0,0,0.570070258369122,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0.270011876663381,0,0.285650984403804,0,0.122490799214954,0,0,0,0.893811366596314,0.307213066512487,0.131886287730194,0.0914876436024097,0,0.837548997004143,0.56276261003168,1.06958773443767,0.294628585473668,0.284743361598206,0,2.49896437999507,3.02286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,2.16491041011214,3.29367825117628,3.53867111510348,0.34255163915718,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,3.72783522436244,0.292780797011547,0.41889341362691,0.255457055208591,0,0,0,0.748953197024114,0.915001205637253,0.125654352112864,1.04294592115366,0.255715457330331,0.83115217823824,1.1356888414743,0.101839363850316,0.124406970610093,0,0.210441855886474,0,0,0,0.452114453507145,0.0680364991513279,0,0,0,0,0,0,0,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0.32833492815819,0.162137619091711,0.146199987425332,0,0.268412837520744,0.420579897128254,0,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0.329397909448022,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0,0,0.0632365371242573,0,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,6.46636165583116,0,0,0.339490171550376,0.234690248288502,0.167506257441816,1.19021820443007,0.780534591431195,2.67979744980525,3.76489972402917,1.91345722388985,2.94953966488328,5.87128938344045,4.91806799177139,0,0,0,0,1.44495530989013,1.05490517932983,0,0.504941854408746,0,0,0,0.716906393857656,0.222798674082394,0.566153061577665,0,0,0,0,0.425820255624806,0.178065603667255,0.162886959353576,0.494910368917606,0,0,0,0.188605079755898,0.590603785761546,0,0.258428293168221,0,0.356497378384721,0,1.05418608574999,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0.913394847343798,0.704015124191131,0,0.661585194164886,0,0,0.0603129249281559,0,0.164140899745061,0,1.11255181206306,0,0,0,0,0,0,0,0.139951452323658,0,5.72802370809068,0.316335993581135,0,0.648032044930808,0.836353184057875,0.436725127492355,2.02296519577231,3.38879168473877,3.40282724579238,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0.453460767230423,0,0,0,0.579568782096571,0.750729901804728,0.549454872801795,0.857473516316263,1.00314420807073,0.564751842617067,0,0.572895513439397,0,0,0,1.35004500046361,0,0.453142408984205,0.51776031175182,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.0640251524048693,0,0.476293691283074,0.115884325944855,0,0,0,0.342869252385415,0,0.238436189947321,0.145346416632329,0.188218760830661,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0.429742108096597,0.191288332068843,0.220591419119515,0.463735671240843|short_description=p@chr8:97202625..97202639,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:97202625..97202639,- | |||
|id=chr8:97202625..97202639,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,5.09e-11,3;CL:0002202,5.09e-11,3;CL:0000069,5.09e-11,3;CL:0002632,5.09e-11,3;CL:0002368,5.09e-11,3;CL:0000307,5.09e-11,3;CL:0000377,5.09e-11,3;CL:0000217,9.13e-08,2;CL:0000328,9.13e-08,2;CL:0002573,9.13e-08,2;CL:0002376,9.13e-08,2;CL:0000218,9.13e-08,2;CL:0000692,9.13e-08,2;CL:0002377,9.13e-08,2;CL:0002375,9.13e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!1.61e-09!17;UBERON:0005181!1.61e-09!17;UBERON:0002224!1.61e-09!17;UBERON:0000915!1.61e-09!17;UBERON:0008947!1.61e-09!17;UBERON:0003258!1.61e-09!17;UBERON:0002048!3.41e-07!14;UBERON:0000117!3.41e-07!14;UBERON:0000171!3.41e-07!14;UBERON:0000170!3.41e-07!14;UBERON:0005597!3.41e-07!14;UBERON:0000118!3.41e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,5.61e-23,17;UBERON:0005181,5.61e-23,17;UBERON:0002224,5.61e-23,17;UBERON:0000915,5.61e-23,17;UBERON:0008947,5.61e-23,17;UBERON:0003258,5.61e-23,17;UBERON:0002048,5.93e-15,14;UBERON:0000117,5.93e-15,14;UBERON:0000171,5.93e-15,14;UBERON:0000170,5.93e-15,14;UBERON:0005597,5.93e-15,14;UBERON:0000118,5.93e-15,14;UBERON:0005153,4.28e-12,17;UBERON:0003126,5.09e-11,3;UBERON:0001005,5.09e-11,3;UBERON:0007196,5.09e-11,3;UBERON:0001558,5.09e-11,3;UBERON:0005157,4.29e-10,20;UBERON:0000065,2.59e-08,41;UBERON:0001004,4.58e-08,42;UBERON:0001896,3.30e-07,2;UBERON:0002298,3.30e-07,2;UBERON:0005290,3.30e-07,2;UBERON:0010096,3.30e-07,2;UBERON:0001041,7.04e-07,80 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0.47997726838022,0.22940928106717,0,0,0,0.570070258369122,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0.270011876663381,0,0.285650984403804,0,0.122490799214954,0,0,0,0.893811366596314,0.307213066512487,0.131886287730194,0.0914876436024097,0,0.837548997004143,0.56276261003168,1.06958773443767,0.294628585473668,0.284743361598206,0,2.49896437999507,3.02286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,2.16491041011214,3.29367825117628,3.53867111510348,0.34255163915718,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,3.72783522436244,0.292780797011547,0.41889341362691,0.255457055208591,0,0,0,0.748953197024114,0.915001205637253,0.125654352112864,1.04294592115366,0.255715457330331,0.83115217823824,1.1356888414743,0.101839363850316,0.124406970610093,0,0.210441855886474,0,0,0,0.452114453507145,0.0680364991513279,0,0,0,0,0,0,0,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0.32833492815819,0.162137619091711,0.146199987425332,0,0.268412837520744,0.420579897128254,0,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0.329397909448022,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0,0,0.0632365371242573,0,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,6.46636165583116,0,0,0.339490171550376,0.234690248288502,0.167506257441816,1.19021820443007,0.780534591431195,2.67979744980525,3.76489972402917,1.91345722388985,2.94953966488328,5.87128938344045,4.91806799177139,0,0,0,0,1.44495530989013,1.05490517932983,0,0.504941854408746,0,0,0,0.716906393857656,0.222798674082394,0.566153061577665,0,0,0,0,0.425820255624806,0.178065603667255,0.162886959353576,0.494910368917606,0,0,0,0.188605079755898,0.590603785761546,0,0.258428293168221,0,0.356497378384721,0,1.05418608574999,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0.913394847343798,0.704015124191131,0,0.661585194164886,0,0,0.0603129249281559,0,0.164140899745061,0,1.11255181206306,0,0,0,0,0,0,0,0.139951452323658,0,5.72802370809068,0.316335993581135,0,0.648032044930808,0.836353184057875,0.436725127492355,2.02296519577231,3.38879168473877,3.40282724579238,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0.453460767230423,0,0,0,0.579568782096571,0.750729901804728,0.549454872801795,0.857473516316263,1.00314420807073,0.564751842617067,0,0.572895513439397,0,0,0,1.35004500046361,0,0.453142408984205,0.51776031175182,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.0640251524048693,0,0.476293691283074,0.115884325944855,0,0,0,0.342869252385415,0,0.238436189947321,0.145346416632329,0.188218760830661,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0.429742108096597,0.191288332068843,0.220591419119515,0.463735671240843 | |||
|short_description=p@chr8:97202625..97202639,- | |||
}} |
Revision as of 16:32, 14 September 2013
Short description: | p@chr8:97202625..97202639, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:97202625..97202639, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 5.09e-11 | 3 |
epithelial cell of tracheobronchial tree | 5.09e-11 | 3 |
branched duct epithelial cell | 5.09e-11 | 3 |
epithelial cell of lower respiratory tract | 5.09e-11 | 3 |
respiratory epithelial cell | 5.09e-11 | 3 |
tracheal epithelial cell | 5.09e-11 | 3 |
tracheoblast | 5.09e-11 | 3 |
insulating cell | 9.13e-08 | 2 |
myelin accumulating cell | 9.13e-08 | 2 |
Schwann cell | 9.13e-08 | 2 |
non-myelinating Schwann cell | 9.13e-08 | 2 |
myelinating Schwann cell;;Schwann cell | 9.13e-08 | 2 |
terminal Schwann cell | 9.13e-08 | 2 |
immature Schwann cell | 9.13e-08 | 2 |
Schwann cell precursor | 9.13e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 5.61e-23 | 17 |
thoracic segment organ | 5.61e-23 | 17 |
thoracic cavity | 5.61e-23 | 17 |
thoracic segment of trunk | 5.61e-23 | 17 |
respiratory primordium | 5.61e-23 | 17 |
endoderm of foregut | 5.61e-23 | 17 |
lung | 5.93e-15 | 14 |
respiratory tube | 5.93e-15 | 14 |
respiration organ | 5.93e-15 | 14 |
pair of lungs | 5.93e-15 | 14 |
lung primordium | 5.93e-15 | 14 |
lung bud | 5.93e-15 | 14 |
epithelial bud | 4.28e-12 | 17 |
trachea | 5.09e-11 | 3 |
respiratory airway | 5.09e-11 | 3 |
tracheobronchial tree | 5.09e-11 | 3 |
lower respiratory tract | 5.09e-11 | 3 |
epithelial fold | 4.29e-10 | 20 |
respiratory tract | 2.59e-08 | 41 |
respiratory system | 4.58e-08 | 42 |
medulla oblongata | 3.30e-07 | 2 |
brainstem | 3.30e-07 | 2 |
myelencephalon | 3.30e-07 | 2 |
future myelencephalon | 3.30e-07 | 2 |
foregut | 7.04e-07 | 80 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.