FFCP PHASE1:Hg19::chr1:31886034..31886099,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=347735 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23231 | |||
|TSSclassifier=strong | |||
|UniProt=Q96SA4,Q96IM8 | |||
|association_with_transcript=71bp_to_ENST00000373709,NM_178865,uc001bst.2,uc009vtw.1_5end | |||
|coexpression_cluster_id=C226 | |||
|description=CAGE_peak_1_at_SERINC2_5end | |||
|id=chr1:31886034..31886099,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.07e-28!254;CL:0000220!1.49e-19!246;CL:0002321!1.74e-19!248;CL:0002076!1.19e-13!43;CL:0000223!2.50e-13!59;CL:0000548!5.45e-11!679;CL:0000004!5.45e-11!679;CL:0000255!5.45e-11!679;CL:0000012!3.57e-10!682;CL:0000055!3.48e-09!180;CL:0002159!1.32e-08!13;CL:0002368!1.52e-08!13;CL:0002077!2.51e-08!33;CL:0000076!2.06e-07!62;CL:0002371!2.09e-07!591;CL:0002251!4.06e-07!21;CL:0000057!6.37e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.03e-10;42!CL:0002159;5.15e-09;14!CL:0002368;1.45e-08;13!CL:0002077;9.26e-08;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.37e-28,253;CL:0002321,2.41e-19,250;CL:0002076,2.88e-13,42;CL:0000223,6.33e-13,58;CL:0002159,5.13e-09,14;CL:0002077,1.00e-08,34;CL:0002368,1.43e-08,13;CL:0000076,9.63e-08,63;CL:0000057,5.84e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000223;2.65e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!5.69e-27!169;UBERON:0000925!5.69e-27!169;UBERON:0006595!5.69e-27!169;UBERON:0002100!3.17e-22!216;UBERON:0003104!7.77e-22!238;UBERON:0009142!7.77e-22!238;UBERON:0000468!2.66e-21!659;UBERON:0001007!3.04e-21!155;UBERON:0001555!3.04e-21!155;UBERON:0007026!3.04e-21!155;UBERON:0000467!1.30e-20!625;UBERON:0000480!2.74e-20!626;UBERON:0003102!7.16e-20!95;UBERON:0000475!4.68e-18!365;UBERON:0005256!1.28e-17!143;UBERON:0000481!2.91e-15!347;UBERON:0000922!3.39e-15!612;UBERON:0002050!1.16e-14!605;UBERON:0005423!1.16e-14!605;UBERON:0000923!1.28e-14!604;UBERON:0005291!1.28e-14!604;UBERON:0006598!1.28e-14!604;UBERON:0002532!1.28e-14!604;UBERON:0000077!1.32e-14!130;UBERON:0004921!2.15e-14!129;UBERON:0004185!2.15e-14!129;UBERON:0001444!1.31e-13!48;UBERON:0000161!9.91e-13!35;UBERON:0000466!1.07e-12!126;UBERON:0000926!1.43e-12!448;UBERON:0004120!1.43e-12!448;UBERON:0006603!1.43e-12!448;UBERON:0001004!2.09e-12!72;UBERON:0000062!3.81e-12!511;UBERON:0000165!5.88e-12!28;UBERON:0000930!5.88e-12!28;UBERON:0000464!1.70e-11!104;UBERON:0009569!3.87e-11!113;UBERON:0001008!3.26e-10!45;UBERON:0006554!5.22e-10!44;UBERON:0000490!2.31e-09!138;UBERON:0000166!3.03e-09!21;UBERON:0000914!3.69e-09!83;UBERON:0002329!3.69e-09!83;UBERON:0003077!3.69e-09!83;UBERON:0003059!3.69e-09!83;UBERON:0007282!3.69e-09!83;UBERON:0009618!3.69e-09!83;UBERON:0007285!3.69e-09!83;UBERON:0005177!1.38e-08!107;UBERON:0000486!1.50e-08!82;UBERON:0003064!3.53e-08!37;UBERON:0001041!6.41e-08!98;UBERON:0007196!1.21e-07!14;UBERON:0001558!1.21e-07!14;UBERON:0005085!1.61e-07!29;UBERON:0000915!2.05e-07!52;UBERON:0000064!6.83e-07!219;UBERON:0000058!8.90e-07!26;UBERON:0005911!9.60e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;5.26e-12;28!UBERON:0001555;7.08e-10;54!UBERON:0000161;1.51e-09;19!UBERON:0000166;1.51e-09;19!UBERON:0001444;5.85e-09;48!UBERON:0007811;2.65e-08;52!UBERON:0000033;3.13e-08;50!UBERON:0004921;8.10e-08;33!UBERON:0003729;1.09e-07;13!UBERON:0000344;1.71e-07;20!UBERON:0000153;2.07e-07;54!UBERON:0007196;2.30e-07;15!UBERON:0001558;2.30e-07;15!UBERON:0001004;3.42e-07;65!UBERON:0004923;5.33e-07;55!UBERON:0006554;6.30e-07;30!UBERON:0001008;6.30e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.94e-27,160;UBERON:0000925,7.94e-27,160;UBERON:0006595,7.94e-27,160;UBERON:0003102,6.65e-22,99;UBERON:0001007,3.48e-21,145;UBERON:0001555,3.48e-21,145;UBERON:0007026,3.48e-21,145;UBERON:0002100,1.26e-19,199;UBERON:0004921,4.38e-14,118;UBERON:0000033,2.57e-13,56;UBERON:0001444,4.64e-13,49;UBERON:0000161,6.23e-13,36;UBERON:0000922,9.02e-13,592;UBERON:0001004,1.23e-12,74;UBERON:0005423,1.49e-12,581;UBERON:0000165,3.87e-12,29;UBERON:0000930,3.87e-12,29;UBERON:0003104,5.06e-12,160;UBERON:0009142,5.06e-12,160;UBERON:0005256,5.23e-12,122;UBERON:0001008,5.60e-12,48;UBERON:0006554,9.02e-12,47;UBERON:0000153,2.05e-11,62;UBERON:0007811,2.05e-11,62;UBERON:0009569,6.85e-11,112;UBERON:0000490,7.41e-11,148;UBERON:0002050,3.96e-10,564;UBERON:0000166,2.04e-09,22;UBERON:0000923,3.42e-09,560;UBERON:0010316,3.42e-09,560;UBERON:0005291,3.42e-09,560;UBERON:0006598,3.42e-09,560;UBERON:0010317,3.42e-09,560;UBERON:0002532,3.42e-09,560;UBERON:0005177,5.84e-09,101;UBERON:0000486,1.60e-08,83;UBERON:0004923,1.99e-08,66;UBERON:0003729,1.07e-07,13;UBERON:0007503,1.30e-07,78;UBERON:0001041,1.42e-07,87;UBERON:0000344,1.68e-07,20;UBERON:0005085,2.17e-07,31;UBERON:0007196,2.26e-07,15;UBERON:0001558,2.26e-07,15;UBERON:0000915,4.79e-07,52 | |||
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| |||
|short_description=p1@SERINC2 | |||
}} |
Revision as of 17:32, 10 January 2014
Short description: | p1@SERINC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SERINC2_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | 71bp_to_ENST00000373709, NM_178865, uc001bst.2, uc009vtw.1_5end |
EntrezGene: | SERINC2 |
HGNC: | 23231 |
UniProt: | Q96SA4Q96IM8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.37e-28 | 253 |
embryonic cell | 2.41e-19 | 250 |
endo-epithelial cell | 2.88e-13 | 42 |
endodermal cell | 6.33e-13 | 58 |
general ecto-epithelial cell | 5.13e-09 | 14 |
ecto-epithelial cell | 1.00e-08 | 34 |
respiratory epithelial cell | 1.43e-08 | 13 |
squamous epithelial cell | 9.63e-08 | 63 |
fibroblast | 5.84e-07 | 76 |