FFCP PHASE1:Hg19::chr1:152779121..152779133,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=353133 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29464 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T751 | |||
|association_with_transcript=-14bp_to_ENST00000368768,NM_178351,uc001fap.1_5end | |||
|coexpression_cluster_id=C202 | |||
|description=CAGE_peak_1_at_LCE1C_5end | |||
|id=chr1:152779121..152779133,- | |||
|ontology_enrichment_celltype=CL:0002076!6.07e-23!43;CL:0000223!7.63e-18!59;CL:0002368!3.16e-16!13;CL:0002159!1.81e-14!13;CL:0000622!3.43e-13!5;CL:0002251!8.83e-12!21;CL:0000154!6.69e-11!6;CL:0000066!1.04e-08!254;CL:0002202!1.06e-08!9;CL:0002632!1.06e-08!9;CL:0002623!1.34e-08!3;CL:0002621!1.75e-08!3;CL:0000362!3.87e-08!8;CL:0002328!1.41e-07!3;CL:0000068!1.58e-07!3;CL:0000069!1.58e-07!3;CL:0000307!1.58e-07!3;CL:0000377!1.58e-07!3;CL:0000453!2.87e-07!5;CL:0000240!3.87e-07!6;CL:0000311!3.87e-07!6;CL:0000079!3.87e-07!6;CL:0000237!3.87e-07!6;CL:0000036!3.87e-07!6;CL:0000357!3.87e-07!6;CL:0000114!3.87e-07!6;CL:0000150!4.40e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000622;8.08e-25;5!CL:0002159;2.60e-21;14!CL:0000154;1.19e-20;6!CL:0002623;1.26e-15;3!CL:0002621;1.91e-15;3!CL:0002251;1.71e-14;20!CL:0000362;6.88e-14;9!CL:0000150;1.10e-13;9!CL:0000240;1.59e-13;6!CL:0000311;1.59e-13;6!CL:0000079;1.59e-13;6!CL:0000237;1.59e-13;6!CL:0002076;1.18e-12;42!CL:0002327;4.32e-12;4!CL:0000317;5.89e-11;2!CL:1000448;5.89e-11;2!CL:0002308;5.89e-11;2!CL:0002140;5.89e-11;2!CL:0000312;8.73e-10;5!CL:0002368;1.08e-08;13!CL:0002077;1.97e-07;34!CL:0002166;2.57e-07;3!CL:0000307;4.40e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,7.53e-25,5;CL:0002159,2.15e-21,14;CL:0000154,1.13e-20,6;CL:0002076,2.03e-16,42;CL:0002623,1.20e-15,3;CL:0002621,2.06e-15,3;CL:0002251,2.05e-14,20;CL:0000362,6.89e-14,9;CL:0000150,1.05e-13,9;CL:0000240,2.16e-13,6;CL:0000311,2.16e-13,6;CL:0000079,2.16e-13,6;CL:0000237,2.16e-13,6;CL:0000036,2.16e-13,6;CL:0000357,2.16e-13,6;CL:0000114,2.16e-13,6;CL:0002327,4.58e-12,4;CL:0000223,3.84e-11,58;CL:0000317,5.75e-11,2;CL:1000448,5.75e-11,2;CL:0002308,5.75e-11,2;CL:0002140,5.75e-11,2;CL:0000312,8.87e-10,5;CL:0002368,1.06e-08,13;CL:0002077,4.65e-08,34;CL:0002166,2.06e-07,3;CL:0000066,3.99e-07,253;CL:0000068,6.01e-07,3;CL:0000069,6.01e-07,3;CL:0000307,6.01e-07,3;CL:0000377,6.01e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;1.59e-13;6!CL:0000114;1.59e-13;6!CL:0000377;4.40e-07;3!CL:0000223;8.11e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.60e-13!72;UBERON:0000161!8.61e-10!35;UBERON:0000166!9.89e-10!21;UBERON:0004119!3.40e-09!169;UBERON:0000925!3.40e-09!169;UBERON:0006595!3.40e-09!169;UBERON:0003102!4.72e-09!95;UBERON:0001949!1.75e-08!3;UBERON:0000165!3.21e-08!28;UBERON:0000930!3.21e-08!28;UBERON:0000065!4.23e-08!53;UBERON:0000365!1.23e-07!5;UBERON:0004815!1.41e-07!3;UBERON:0002031!1.41e-07!3;UBERON:0007196!4.48e-07!14;UBERON:0001558!4.48e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.91e-15;3!UBERON:0000165;1.52e-12;28!UBERON:0001911;4.32e-12;4!UBERON:0000161;6.84e-12;19!UBERON:0000166;6.84e-12;19!UBERON:0001003;1.17e-11;15!UBERON:0007376;1.17e-11;15!UBERON:0010371;1.72e-11;31!UBERON:0002419;5.89e-11;2!UBERON:0007771;5.89e-11;2!UBERON:0003297;5.89e-11;2!UBERON:0001821;5.89e-11;2!UBERON:0003487;5.89e-11;2!UBERON:0001820;5.89e-11;2!UBERON:0000486;7.94e-10;12!UBERON:0003729;3.52e-09;13!UBERON:0002365;5.10e-09;31!UBERON:0002330;5.10e-09;31!UBERON:0001044;4.87e-08;6!UBERON:0003293;4.87e-08;6!UBERON:0003294;4.87e-08;6!UBERON:0010047;4.87e-08;6!UBERON:0003408;4.87e-08;6!UBERON:0000167;4.87e-08;6!UBERON:0002331;6.54e-08;10!UBERON:0003929;7.18e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.06e-15,3;UBERON:0003102,1.77e-13,99;UBERON:0000166,4.47e-13,22;UBERON:0001911,4.58e-12,4;UBERON:0005333,4.58e-12,4;UBERON:0008425,4.58e-12,4;UBERON:0005311,4.58e-12,4;UBERON:0000165,5.11e-12,29;UBERON:0000930,5.11e-12,29;UBERON:0001003,1.17e-11,15;UBERON:0007376,1.17e-11,15;UBERON:0007383,1.17e-11,15;UBERON:0002419,5.75e-11,2;UBERON:0007771,5.75e-11,2;UBERON:0003297,5.75e-11,2;UBERON:0001821,5.75e-11,2;UBERON:0003487,5.75e-11,2;UBERON:0001820,5.75e-11,2;UBERON:0005089,5.75e-11,2;UBERON:0005088,5.75e-11,2;UBERON:0000033,6.00e-10,56;UBERON:0002365,4.14e-09,31;UBERON:0002330,4.14e-09,31;UBERON:0003729,4.24e-09,13;UBERON:0000153,9.35e-09,62;UBERON:0007811,9.35e-09,62;UBERON:0001004,3.33e-08,74;UBERON:0001044,4.76e-08,6;UBERON:0003293,4.76e-08,6;UBERON:0003294,4.76e-08,6;UBERON:0010047,4.76e-08,6;UBERON:0000167,4.76e-08,6;UBERON:0001444,5.30e-08,49;UBERON:0002331,6.54e-08,10;UBERON:0000358,6.54e-08,10;UBERON:0000307,6.54e-08,10;UBERON:0000091,6.54e-08,10;UBERON:0000087,6.54e-08,10;UBERON:0007010,6.54e-08,10;UBERON:0007806,6.54e-08,10;UBERON:0008780,6.54e-08,10;UBERON:0005728,6.54e-08,10;UBERON:0000161,1.68e-07,36;UBERON:0004121,9.21e-07,171;UBERON:0000924,9.21e-07,171;UBERON:0006601,9.21e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993374274723366,1.47781061009902,1.25937250101887,0,0,0,0.919421224478927,0.90361775633475,0.739508020333575,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47869535693934,6.81865301477087,2.00763216772303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.7423273457375,10.1161577931858,6.63491217916764,1.01847289674383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84780341018745,4.96212840348353,4.29880908973672,13.0785272331283,29.5204662957213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0,0.601519410909855,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29706215198469,10.4009639365843,0,0,0,0,0,0,0,0,0,1.4875642382488,1.92190067365106,0.638063562472921,1.51736671283325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,1.34060455107157,1.08890984861323,0,0,1.68471475667626,1.7737206141467,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.62023835522363,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.63390144493182,1.85345908419754,1.14864144456001,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0.998395002494955,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0,0,0.449947783103001,0,0,2.34804281319486,0,0,0,0,0.191915197319445,0,0,0,0,0,1.95952416065645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0.771656153083659,0,0,0,0,0,1.16916185303633,0.265729680626726,0.163565394255844,0,0,0,21.3986513564775,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.71109048804923,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.2840371681898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0.913158720509496,0,0,0,0,0,0,0,2.07216164163037,2.7314956335032,202.539080911529,0,0.118332000730565,0.596493833314104,0,0,0,0,0,0,0,0,0,0,185.055888355532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516711278688049,0.124149428591716,0,0,0,1.52401723527873,0,0.0673520530145875,0,0.332660356546013,0.162806537221949,0,0,0,14.0784565442073,0,0,0,0.402547587182052,1.28227396921293 | |||
|short_description=p1@LCE1C | |||
}} |
Revision as of 20:56, 10 January 2014
Short description: | p1@LCE1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LCE1C_5end |
Coexpression cluster: | C202_salivary_skin_penis_tongue_uterus_cervical_immature |
Association with transcript: | -14bp_to_ENST00000368768, NM_178351, uc001fap.1_5end |
EntrezGene: | LCE1C |
HGNC: | 29464 |
UniProt: | Q5T751 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data