FFCP PHASE1:Hg19::chr11:777114..777123,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=347862 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26616 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=55bp_to_ENST00000529362_5end | |||
|description=CAGE_peak_2_at_PDDC1_5end | |||
|id=chr11:777114..777123,- | |||
|ontology_enrichment_celltype=CL:0002321!9.89e-13!248;CL:0000055!3.75e-12!180;CL:0000220!6.95e-12!246;CL:0000133!5.92e-08!59;CL:0000222!6.32e-07!119;CL:0000333!7.90e-07!41;CL:0000393!8.48e-07!60;CL:0000211!8.48e-07!60;CL:0000221!9.21e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.36e-19;5!CL:0002545;9.54e-13;2!CL:1000413;1.20e-10;9!CL:0002321;9.42e-10;15!CL:0002544;2.21e-09;6!CL:0000222;3.29e-07;1!CL:0002591;3.29e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.62e-19,5;CL:0002545,8.03e-13,2;CL:1000413,7.83e-11,9;CL:0002544,1.41e-09,6;CL:0000047,3.38e-07,8;CL:0002591,4.08e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.29e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.34e-12!94;UBERON:0001016!7.34e-12!94;UBERON:0005743!5.94e-11!86;UBERON:0000483!2.88e-10!309;UBERON:0000119!3.13e-10!312;UBERON:0001017!7.90e-10!82;UBERON:0000025!4.53e-09!194;UBERON:0001637!2.65e-08!42;UBERON:0003509!2.65e-08!42;UBERON:0004572!2.65e-08!42;UBERON:0004111!4.44e-08!241;UBERON:0000475!8.11e-08!365;UBERON:0000477!8.13e-08!286;UBERON:0000955!1.06e-07!69;UBERON:0006238!1.06e-07!69;UBERON:0001981!4.29e-07!60;UBERON:0007500!4.29e-07!60;UBERON:0004537!4.29e-07!60;UBERON:0006965!4.29e-07!60;UBERON:0001049!5.32e-07!57;UBERON:0005068!5.32e-07!57;UBERON:0006241!5.32e-07!57;UBERON:0007135!5.32e-07!57;UBERON:0002049!9.59e-07!79;UBERON:0007798!9.59e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;9.54e-13;2!UBERON:0000122;9.54e-13;2!UBERON:0005800;9.54e-13;2!UBERON:0001515;9.54e-13;2!UBERON:0003915;1.20e-10;9!UBERON:0004700;1.20e-10;9!UBERON:0001917;1.20e-10;9!UBERON:0002581;3.29e-07;1!UBERON:0002902;3.29e-07;1!UBERON:0002336;3.29e-07;1!UBERON:0000941;3.29e-07;1!UBERON:0001785;3.29e-07;1!UBERON:0002464;3.29e-07;1!UBERON:0004904;3.29e-07;1!UBERON:0011215;3.29e-07;1!UBERON:0001018;3.29e-07;1!UBERON:0001021;3.29e-07;1!UBERON:0002473;3.29e-07;1!UBERON:0005340;3.29e-07;1!UBERON:0003544;3.29e-07;1!UBERON:0005970;3.29e-07;1!UBERON:0009899;3.29e-07;1!UBERON:0002316;3.29e-07;1!UBERON:0001020;3.29e-07;1!UBERON:0002437;3.29e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,5.60e-13,2;UBERON:0000122,5.60e-13,2;UBERON:0005800,8.03e-13,2;UBERON:0001515,8.03e-13,2;UBERON:0003915,7.83e-11,9;UBERON:0004700,7.83e-11,9;UBERON:0001917,7.83e-11,9;UBERON:0000941,2.37e-07,1;UBERON:0001785,2.37e-07,1;UBERON:0002464,2.37e-07,1;UBERON:0004904,2.37e-07,1;UBERON:0001021,2.37e-07,1;UBERON:0003902,2.37e-07,1;UBERON:0005425,2.37e-07,1;UBERON:0002336,2.67e-07,1;UBERON:0011215,2.67e-07,1;UBERON:0001018,2.67e-07,1;UBERON:0002473,2.67e-07,1;UBERON:0005340,2.67e-07,1;UBERON:0003544,2.67e-07,1;UBERON:0005970,2.67e-07,1;UBERON:0002316,2.67e-07,1;UBERON:0001020,2.67e-07,1;UBERON:0002437,2.67e-07,1;UBERON:0002581,4.34e-07,1;UBERON:0002902,4.60e-07,1;UBERON:0009899,4.60e-07,1;UBERON:0001016,4.68e-07,89 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0.123121058076788,0.408001382488506,0.940364164434263,0.85870796139317,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.710846162437108,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0,0,0,0.579386075843295,0,0,0.0945348171640679,0,0.175669571386252,0.392937226493138,0,0,0,0,0,0,0,0,0,1.72046919021225,0,0,1.25849830862972,0.550236083880135,0.626984899610432,0.516833518338658,0,0,0.805658634218294,0.760272105718513,0.24406205754817,1.10298924103761,1.62028389576352,0.0892997282840798,0,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0.379891534993739,0.794455084879313,0.286836620748814,0,0,1.06748995729705,0.49333509683432,0,0.404132016209064,0,0.151357427644931,0,0,0.624320153660641,0,0.448346041655403,0.23486899728753,0,0,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0,0.718618141816238,0,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0.226864366320042,0.179389635688862,0,0.635795703478686,0.300091096084402,0.206105058476878,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0,0,0.161646056818812,0,0,0,0,0.272746120590835,0.286804595389004,1.46368447355514,2.25300606146525,0.69716365721711,1.34759371519982,1.00928340350251,0.36497735907583,0,0.643240938192885,0,0,0,0.118306800039844,0,0.241011029883482,0.220587945464788,0.217879444092406,0.474541238222193,0,0,0.38474715694639,0,0,0.8231480226628,0,0,0,0,0,0.245976877086227,0.343135620597051,0.329250856225877,0,0.100528972411631,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0.93733833986777,0,0.283550194484773,0,0,0,0,0,0,0,0,0.253991577168676,0,1.17217447210047,0,0.205654985406647,0.300343057843917,0.285826432630578,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,1.0656887160644,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0.799783929456456,0,0,0,0.479249710983165,0,0,0.144781306667579,0.410952645100767,0.358121926479791,0.112085143993527,0,0,0,1.01637849688985,0,0,0.502548796003046,0,0,0,0,0.12269149171914,0,0.542530047399471,0.207970861530807,0,0.315404830067869,0,0,4.5481500811197,0,0,0.184369168541703,0.0868836144680828,0.391602314925481,0,0,0,0,0.303127571446259,0,0,0.248107807818777,0.61384789315225,0.561320188866147,0,0,0,0,0,0,0.410635780069046,0,0.116210378459959,0.483437798366489,0.601519410909855,0,0.114814448164607,0.364182336013434,0.524497659837696,0,0,0.784349769176855,0,0.105551628892876,0,0.340187410553031,0.215915916102139,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0.256450125116389,0.656029291399411,0.325378394664303,0,0,0.082509499920588,0,0,0,0,0,0.307007349452259,0.137836572484531,0,0.290033387828457,0.170453254832202,0.178064071293475,0.165284915360978,0,0.382838137483752,0.10115778085555,0,0.62962469366128,0.6970372701606,0.616067160352178,0.532306030317022,0,0.37064843820784,0.286249773483982,0,0,0.190630193923825,0.511795582622668,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0.589062011728432,0.404364963146632,0,0.421258456238981,0,0.243713489631284,0,0.136499911407986,0,1.13008116620243,0.551365343546124,0.66343897524122,0,0,0.655894752046633,0.811641507850816,0.6196469961995,0,0.143411352204052,0.392996164052485,0,0,0.211107635297664,0,0.75894634753143,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0.144269212976445,0.142283686696828,0,0.399158742865633,0,0,0.324621940274555,0,0.228234679033192,0.313359791546046,0,0,0,0,0,0,0,0.223676107892416,0,0,0,1.23087398947712,0.270455678475983,0,0,0,0,0.36408156524854,0,0,0,0,0,0,0.140669416410513,0,0,0.422250816255987,0,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,2.90799823828566,0.278304294485554,1.99613798001194,0,0,0,0.341380344856499,0.254253650292766,0.236387681767936,0,0,0.520874984799877,0,0.482385754501632,0,0,0.295547618953547,0.658156191461918,0,0,0,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0.649165919226273,0,0,0,0,0,0.104421949505455,1.28062152663286,0,0.468528891450678,0,0,1.69946265673865,0,0,0,0,0.300646838828985,0.207376382794494,0,0,0,0,0.284609546029793,0,0.347119476670262,0,0,0,0,0,0,0.0821154570532092,0,0.617792886840502,0.225980740780532,0.137041924646751,0,0.633107959558787,0,0,0,0,0,0.572682980829578,0.171594997861965,0,0,0,0,0.209205692624666,0.203996435272644,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0.393915911536118,0.0824158583811665,0.26961417541674,0,0.169346664131569,0,0.272406812223151,1.44677833618517,1.65047323916681,0.415440338029185,0,0,0.485996453264197,0,0.0788057072991982,0,0.316801009558219,0,0,0,0,0.76280561296425,0.542999601753713,0,0.326587360109409,0,0.082092520749339,0.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| |||
|short_description=p2@PDDC1 | |||
}} |
Revision as of 05:51, 11 January 2014
Short description: | p2@PDDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PDDC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 55bp_to_ENST00000529362_5end |
EntrezGene: | PDDC1 |
HGNC: | 26616 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.62e-19 | 5 |
thoracic aorta endothelial cell | 8.03e-13 | 2 |
endothelial cell of artery | 7.83e-11 | 9 |
aortic endothelial cell | 1.41e-09 | 6 |
neuronal stem cell | 3.38e-07 | 8 |
smooth muscle cell of the pulmonary artery | 4.08e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
multi cell component structure | 5.60e-13 | 2 |
neuron projection bundle | 5.60e-13 | 2 |
segment of aorta | 8.03e-13 | 2 |
thoracic aorta | 8.03e-13 | 2 |
endothelial tube | 7.83e-11 | 9 |
arterial system endothelium | 7.83e-11 | 9 |
endothelium of artery | 7.83e-11 | 9 |
cranial nerve II | 2.37e-07 | 1 |
cranial nerve | 2.37e-07 | 1 |
nerve trunk | 2.37e-07 | 1 |
nerve connecting eye with brain | 2.37e-07 | 1 |
nerve | 2.37e-07 | 1 |
retinal neural layer | 2.37e-07 | 1 |
presumptive neural retina | 2.37e-07 | 1 |
corpus callosum | 2.67e-07 | 1 |
central nervous system cell part cluster | 2.67e-07 | 1 |
axon tract | 2.67e-07 | 1 |
intercerebral commissure | 2.67e-07 | 1 |
dorsal telencephalic commissure | 2.67e-07 | 1 |
brain white matter | 2.67e-07 | 1 |
brain commissure | 2.67e-07 | 1 |
white matter | 2.67e-07 | 1 |
nervous system commissure | 2.67e-07 | 1 |
cerebral hemisphere white matter | 2.67e-07 | 1 |
postcentral gyrus | 4.34e-07 | 1 |
occipital pole | 4.60e-07 | 1 |
pole of cerebral hemisphere | 4.60e-07 | 1 |
nervous system | 4.68e-07 | 89 |