FFCP PHASE1:Hg19::chr11:117057817..117057863,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=51092 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24272 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-479bp_to_ENST00000526813_5end | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_27_at_SIDT2_5end | |||
|id=chr11:117057817..117057863,+ | |||
|ontology_enrichment_celltype=CL:0000875!7.53e-15!3;CL:0002396!7.53e-15!3;CL:0000842!4.47e-14!3;CL:0002393!4.81e-13!9;CL:0002397!4.81e-13!9;CL:0002194!4.86e-13!63;CL:0000576!4.86e-13!63;CL:0000040!4.86e-13!63;CL:0000559!4.86e-13!63;CL:0002009!1.53e-12!65;CL:0002087!4.70e-12!119;CL:0000738!7.06e-12!140;CL:0000766!8.57e-12!76;CL:0000839!2.02e-11!70;CL:0000557!3.24e-11!71;CL:0000224!1.11e-10!4;CL:0000037!1.02e-08!172;CL:0000566!1.02e-08!172;CL:0000988!5.75e-08!182;CL:0000840!5.93e-08!5;CL:0001029!5.93e-08!5;CL:0002031!6.56e-08!124;CL:0002057!2.59e-07!42;CL:0002619!2.81e-07!3;CL:0000080!2.90e-07!6;CL:0000451!3.62e-07!10;CL:0000763!6.32e-07!112;CL:0000049!6.32e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000840;4.90e-38;5!CL:0000875;1.27e-33;3!CL:0002396;1.27e-33;3!CL:0000990;1.16e-25;8!CL:0000451;3.79e-21;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,4.90e-38,5;CL:0001029,4.90e-38,5;CL:0000875,1.27e-33,3;CL:0002396,1.27e-33,3;CL:0000990,1.17e-25,8;CL:0002393,3.74e-25,9;CL:0002397,3.74e-25,9;CL:0000451,3.79e-21,10;CL:0002194,5.51e-15,59;CL:0000576,5.51e-15,59;CL:0000040,5.51e-15,59;CL:0000559,5.51e-15,59;CL:0002009,1.66e-14,61;CL:0000839,1.96e-13,66;CL:0000557,3.07e-13,67;CL:0000766,2.43e-12,72;CL:0002087,1.76e-10,115;CL:0002031,4.78e-10,120;CL:0000738,7.24e-09,136;CL:0000763,2.77e-08,108;CL:0000049,2.77e-08,108;CL:0002032,1.75e-07,161;CL:0000837,1.75e-07,161;CL:0000037,3.63e-07,168;CL:0000988,8.50e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.25e-13!102;UBERON:0003061!4.25e-13!102;UBERON:0002193!5.86e-13!112;UBERON:0002371!1.33e-09!80;UBERON:0002405!1.02e-08!115;UBERON:0001474!1.03e-08!86;UBERON:0004765!5.76e-07!101;UBERON:0001434!5.76e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.05e-11,76;UBERON:0001474,7.27e-11,82;UBERON:0004765,6.47e-10,90;UBERON:0002405,1.33e-09,93;UBERON:0002390,4.06e-09,98;UBERON:0003061,4.06e-09,98;UBERON:0001434,6.14e-09,100;UBERON:0002193,2.77e-08,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0.671746422719773,0.971680998056939,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,1.05627643155971,0,0.838634582033504,0.22465726229299,0,0,0.285012743741249,1.39241674039363,1.82664153764634,0,0,1.77901850772711,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,3.24547393654683,3.30846500868608,5.31831842075461,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88025820873143,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p27@SIDT2 | |||
}} |
Revision as of 10:31, 11 January 2014
Short description: | p27@SIDT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_27_at_SIDT2_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | -479bp_to_ENST00000526813_5end |
EntrezGene: | SIDT2 |
HGNC: | 24272 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 4.90e-38 | 5 |
common dendritic progenitor | 4.90e-38 | 5 |
non-classical monocyte | 1.27e-33 | 3 |
CD14-low, CD16-positive monocyte | 1.27e-33 | 3 |
conventional dendritic cell | 1.17e-25 | 8 |
intermediate monocyte | 3.74e-25 | 9 |
CD14-positive, CD16-positive monocyte | 3.74e-25 | 9 |
dendritic cell | 3.79e-21 | 10 |
monopoietic cell | 5.51e-15 | 59 |
monocyte | 5.51e-15 | 59 |
monoblast | 5.51e-15 | 59 |
promonocyte | 5.51e-15 | 59 |
macrophage dendritic cell progenitor | 1.66e-14 | 61 |
myeloid lineage restricted progenitor cell | 1.96e-13 | 66 |
granulocyte monocyte progenitor cell | 3.07e-13 | 67 |
myeloid leukocyte | 2.43e-12 | 72 |
nongranular leukocyte | 1.76e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 4.78e-10 | 120 |
leukocyte | 7.24e-09 | 136 |
myeloid cell | 2.77e-08 | 108 |
common myeloid progenitor | 2.77e-08 | 108 |
hematopoietic oligopotent progenitor cell | 1.75e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.75e-07 | 161 |
hematopoietic stem cell | 3.63e-07 | 168 |
hematopoietic cell | 8.50e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.05e-11 | 76 |
bone element | 7.27e-11 | 82 |
skeletal element | 6.47e-10 | 90 |
immune system | 1.33e-09 | 93 |
hematopoietic system | 4.06e-09 | 98 |
blood island | 4.06e-09 | 98 |
skeletal system | 6.14e-09 | 100 |
hemolymphoid system | 2.77e-08 | 108 |