FFCP PHASE1:Hg19::chr14:95786376..95786395,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79789 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19972 | |||
|TSSclassifier=weak | |||
|UniProt=Q6NUQ2,Q96JQ2 | |||
|association_with_transcript=-131bp_to_NM_024734,uc001yef.2_5end | |||
|description=CAGE_peak_4_at_CLMN_5end | |||
|id=chr14:95786376..95786395,- | |||
|ontology_enrichment_celltype=CL:0002057!8.75e-09!42;CL:0000860!1.40e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000784;5.72e-09;3!CL:0000860;2.10e-07;33!CL:0002057;2.10e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,3.82e-09,3;CL:0002194,2.59e-08,59;CL:0000576,2.59e-08,59;CL:0000040,2.59e-08,59;CL:0000559,2.59e-08,59;CL:0000860,4.34e-08,42;CL:0002057,4.34e-08,42;CL:0002009,5.44e-08,61;CL:0000839,2.86e-07,66;CL:0000557,3.87e-07,67;CL:0000473,6.18e-07,48;CL:0000234,6.18e-07,48 | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.04e-09;3!UBERON:0005425;9.08e-08;1!CL:0002057;1.72e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;2.42e-07;1!DOID:4549;2.42e-07;1!DOID:5861;2.42e-07;1!DOID:6496;2.42e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.51e-07,1;DOID:4549,1.51e-07,1;DOID:5861,1.51e-07,1;DOID:6496,1.51e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.07e-09!115;UBERON:0000073!8.36e-08!94;UBERON:0001016!8.36e-08!94;UBERON:0001049!1.07e-07!57;UBERON:0005068!1.07e-07!57;UBERON:0006241!1.07e-07!57;UBERON:0007135!1.07e-07!57;UBERON:0000062!1.45e-07!511;UBERON:0000922!2.26e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;1.89e-09;11!UBERON:0000473;7.63e-08;8!UBERON:0000941;9.08e-08;1!UBERON:0001785;9.08e-08;1!UBERON:0002464;9.08e-08;1!UBERON:0004904;9.08e-08;1!UBERON:0001021;9.08e-08;1!UBERON:0005795;2.42e-07;1!UBERON:0001301;2.42e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,2.19e-09,11;UBERON:0000473,7.30e-08,8;UBERON:0000941,7.50e-08,1;UBERON:0001785,7.50e-08,1;UBERON:0002464,7.50e-08,1;UBERON:0004904,7.50e-08,1;UBERON:0001021,7.50e-08,1;UBERON:0003902,7.50e-08,1;UBERON:0005425,7.50e-08,1;UBERON:0001301,4.09e-07,1;UBERON:0001474,8.40e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,1.09220686065086,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0.286235987131057,0.136874425072884,0.251085279189606,0.305653622991805,0.492603536699674,0.629686250509434,0.393364276848904,0,0.619264493264304,0,0,0,0,0,0,1.10799081706375,0.601633342410425,0,1.11957737119962,0.32389366601898,0.257575567634187,0.436194716338694,1.88937971844405,0.727752183563449,0.697287110717054,0.411167888021826,0.619412741790207,1.1507695692886,1.0246428261164,0.945928919554341,1.03423704220986,0,0,0.564727018627814,0.545812300115692,0.224723484445085,0.918251677112708,0,0,1.9791078011203,0.598390972864896,0.426224750532694,0.870627715885752,0,0.622822248995575,2.51248665256743,0,0.868755378820466,2.42159801053347,0,0,0,0,0,0.112328631146495,0,0.48217676009124,0,0,0.182664153764634,0,0.546138611262131,0,0,0.400395987036012,0,0,0,0.569212969109448,1.17447437874188,0.382273228125229,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0.378139268656271,0.221729397462564,0.175669571386252,2.29213382120997,0,0,0.324547393654683,0.174129737299267,0.26591592103773,1.19245312152671,0,1.85728750664782,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0.609868530647977,0.265059536642971,1.04574548582567,0.725627385107593,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0.241011029883482,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0.491953754172454,0,0.219500570817251,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0,0.383382679165211,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0.206768026122887,0.215714200818617,0.106727557803444,0.303127571446259,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0.451199612907412,0.231046011313244,0.784349769176855,0,0.316654886678627,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0.183138929636687,0.165018999841176,0,0,0,0,0,0,0,0.107420244868274,0,0.170453254832202,0,0.330569830721956,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0.349934720244983,0,0,0,0.564862804660675,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0,0.79312517629427,0,0.962479855263359,0,0.185803175125719,0.432807638929335,0.284567373393656,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.614321404198464,0.994147647766298,0.703347082052564,0.667852230137435,0,0.422250816255987,0.19924798825107,0,0,0.20453736500431,0.123084805461069,0,0.449341755736634,1.61119057208048,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0.61221999997337,0,0,0,0,0.344743373241465,0.291604613383254,0.694499979733169,0,0.241192877250816,0,0.110579259931225,0,0,0.21787692703798,0,0.461701551022782,0,0.23056390438806,0,0.217294743844016,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.530745387020035,0.611030144933625,0,0.123563938946503,0.104421949505455,0.808813595768125,0,0.702793337176017,0,0.19566461893209,0,0.394584402849391,0,0,0.189559738885464,0.300646838828985,0,0,0,0.313932918407225,1.19472429772959,0.853828638089378,0.138674673013139,0.173559738335131,0.293977192243133,0.522355239482415,1.04836000945218,0,0,0,0,0.0969890164884194,1.588610280447,0.677942222341597,0.137041924646751,0,0.253243183823515,0.195551382734803,0.400794101257669,0,0,0.72045208577053,0,0.343189995723929,0,0.248505071130865,0.471388069233591,0,0,0.101998217636322,0.288950589901519,0,0.410716136675979,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0.201550417460179,0,0,0.393915911536118,0.412079291905832,0.674035438541849,0.196854963029498,0,0,0.544813624446302,0.160753148465019,0,0.415440338029185,0,0,0.303747783290123,0,0.551639951094387,2.20309270166992,0.633602019116439,0.717149357331379,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0.26446520348538,0.684347351537318,1.40963004463334,0.106787412567695,0.157204305099666,0.414239055347196,0,0.197611631897944,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0.655745261419609,0.157054096250234,0,0.122026264901963,0.250381861413,0.573409195690071,0.221858103073705,0.620964029413834,0.691743174681154,0,0.303298235083296,0,0,0.468334905806882,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.521988583930423,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,1.310439395385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| |||
|short_description=p4@CLMN | |||
}} |
Revision as of 21:46, 11 January 2014
Short description: | p4@CLMN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CLMN_5end |
Coexpression cluster: | NA |
Association with transcript: | -131bp_to_NM_024734, uc001yef.2_5end |
EntrezGene: | CLMN |
HGNC: | 19972 |
UniProt: | Q6NUQ2Q96JQ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 3.82e-09 | 3 |
monopoietic cell | 2.59e-08 | 59 |
monocyte | 2.59e-08 | 59 |
monoblast | 2.59e-08 | 59 |
promonocyte | 2.59e-08 | 59 |
classical monocyte | 4.34e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.34e-08 | 42 |
macrophage dendritic cell progenitor | 5.44e-08 | 61 |
myeloid lineage restricted progenitor cell | 2.86e-07 | 66 |
granulocyte monocyte progenitor cell | 3.87e-07 | 67 |
defensive cell | 6.18e-07 | 48 |
phagocyte | 6.18e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 2.19e-09 | 11 |
testis | 7.30e-08 | 8 |
cranial nerve II | 7.50e-08 | 1 |
cranial nerve | 7.50e-08 | 1 |
nerve trunk | 7.50e-08 | 1 |
nerve connecting eye with brain | 7.50e-08 | 1 |
nerve | 7.50e-08 | 1 |
retinal neural layer | 7.50e-08 | 1 |
presumptive neural retina | 7.50e-08 | 1 |
epididymis | 4.09e-07 | 1 |
bone element | 8.40e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.51e-07 | 1 |
extraosseous chondrosarcoma | 1.51e-07 | 1 |
myxoid chondrosarcoma | 1.51e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 1.51e-07 | 1 |