FFCP PHASE1:Hg19::chr15:34629182..34629195,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9990 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10914 | |||
|TSSclassifier=weak | |||
|UniProt=Q9UHW9 | |||
|association_with_transcript=-137bp_to_ENST00000397707,ENST00000560611,NM_001042497,NM_133647,uc001zhw.2,uc001zhx.2,uc001zhy.2,uc001zhz.2_5end | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_10_at_SLC12A6_5end | |||
|id=chr15:34629182..34629195,- | |||
|ontology_enrichment_celltype=CL:0000738!2.97e-29!140;CL:0002087!3.19e-27!119;CL:0000766!6.06e-27!76;CL:0002031!5.85e-26!124;CL:0000037!1.80e-25!172;CL:0000566!1.80e-25!172;CL:0002032!7.51e-25!165;CL:0000837!7.51e-25!165;CL:0002057!2.27e-24!42;CL:0000988!5.51e-23!182;CL:0002194!1.57e-22!63;CL:0000576!1.57e-22!63;CL:0000040!1.57e-22!63;CL:0000559!1.57e-22!63;CL:0000860!1.77e-22!45;CL:0000839!1.90e-22!70;CL:0002009!1.18e-21!65;CL:0000557!1.30e-20!71;CL:0000763!5.38e-19!112;CL:0000049!5.38e-19!112;CL:0000134!2.55e-07!358;CL:0002320!5.27e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.61e-46;33!CL:0002057;2.61e-46;33!CL:0000473;6.90e-42;39!CL:0000234;6.90e-42;39!CL:0000576;4.14e-24;48!CL:0000766;1.29e-19;69!CL:0000738;2.85e-12;136!CL:0000763;5.34e-12;100!CL:0000236;6.85e-12;13!CL:0002087;6.89e-12;104!CL:0000094;6.47e-11;8!CL:0000081;4.93e-10;11!CL:0000775;1.28e-08;3!CL:0000988;2.02e-08;177!CL:0000945;5.89e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.00e-55,72;CL:0000473,4.57e-52,48;CL:0000234,4.57e-52,48;CL:0000860,3.27e-47,42;CL:0002057,3.27e-47,42;CL:0002194,4.42e-47,59;CL:0000576,4.42e-47,59;CL:0000040,4.42e-47,59;CL:0000559,4.42e-47,59;CL:0000738,5.93e-46,136;CL:0002009,3.56e-45,61;CL:0000839,1.43e-43,66;CL:0000557,9.44e-43,67;CL:0002087,1.09e-41,115;CL:0002031,1.86e-39,120;CL:0002032,1.22e-37,161;CL:0000837,1.22e-37,161;CL:0000037,6.52e-37,168;CL:0000763,1.19e-35,108;CL:0000049,1.19e-35,108;CL:0000988,1.65e-35,177;CL:0000134,7.40e-12,354;CL:0002320,2.62e-11,361;CL:0000236,2.91e-11,14;CL:0000094,4.19e-11,8;CL:0000081,4.25e-10,11;CL:0000219,2.17e-09,386;CL:0000775,1.29e-08,3;CL:0000048,5.22e-08,427;CL:0000034,9.68e-08,441;CL:0000723,1.12e-07,433;CL:0000945,3.80e-07,24;CL:0000826,3.80e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;1.22e-33;42!CL:0000049;1.20e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.95e-19!102;UBERON:0003061!2.95e-19!102;UBERON:0002193!2.26e-18!112;UBERON:0002371!5.92e-17!80;UBERON:0001474!1.27e-14!86;UBERON:0004765!9.22e-13!101;UBERON:0001434!9.22e-13!101;UBERON:0002405!6.22e-10!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.15e-07;15!UBERON:0000179;7.15e-07;15!UBERON:0000463;7.15e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.48e-38,98;UBERON:0003061,2.48e-38,98;UBERON:0002371,2.47e-36,76;UBERON:0002193,3.01e-35,108;UBERON:0001474,7.75e-33,82;UBERON:0002405,3.00e-29,93;UBERON:0004765,6.65e-29,90;UBERON:0001434,7.04e-25,100;UBERON:0003081,8.72e-16,203;UBERON:0002204,4.67e-12,167;UBERON:0002384,1.46e-10,371;UBERON:0000926,4.39e-07,315;UBERON:0004120,4.39e-07,315;UBERON:0006603,4.39e-07,315 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0.495065411840187,0,0,0.602694528023977,0.730310090387373,0,0,0,0.313454721478088,0.286235987131057,0.136874425072884,0.376627918784408,0.229240217243854,0.246301768349837,0.157421562627358,0.393364276848904,1.91914699048606,0.928896739896456,0,0,0,0,0.426507697462265,0.293600439334847,1.66198622559563,1.20326668482085,0.651032612147555,0.671746422719773,0,0.257575567634187,2.76256653681173,3.40088349319928,2.66842467306598,2.78914844286822,0.822335776043652,2.47765096716083,2.3015391385772,2.56160706529101,3.31075121844019,4.82643953031266,0.645484683583826,1.35426486594342,2.82363509313907,0.545812300115692,2.47195832889593,3.97909060082173,2.56743221660875,1.27867425159808,2.63881040149373,1.79517291859469,1.27867425159808,2.61188314765726,2.26954089876456,1.24564449799115,3.76872997885115,2.08593167368081,3.47502151528187,3.63239701580021,1.84138817993782,6.64571013625857,0.845021145247767,0.637812899895131,1.04829322754188,0.336985893439485,1.20141514273205,1.12507910687956,0.855038231223746,0.59675003159727,0.182664153764634,1.75996244461323,1.63841583378639,1.77901850772711,3.41384178053206,2.40237592221607,0.574752439954483,1.32208974556972,0,2.27685187643779,1.76171156811282,1.52909291250092,0,1.68152568894461,0.263384084775077,0.983548850569165,0.786021525498329,1.02800749499755,0.83593247695339,0.651844533267181,0.946895611469467,0,0.557052284425868,0.294605907474837,0.443067789167242,1.89562704635511,0.768547918354051,1.30059347559878,0.986627427622057,1.10540007114339,0.289803085735052,1.33457906845854,0,0,0.453237370790265,0,0.34362744548263,0.253019692019503,0.95569624297229,0.651083453856419,0,0,0.383959833463255,0,0.236777252044017,0.821127996921047,0.80642697289893,0.534880391567015,0.579297615531196,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.289693037921647,0,0,0.189069634328136,0.221729397462564,0.43917392846563,0.654895377488563,0.728590576585084,0,2.59637914923747,1.39303789839414,1.32957960518865,0.715471872916026,0,0.74291500265913,0.198762407366705,0.860234595106124,0,0,0.419499436209906,0.550236083880135,0.417989933073621,0.258416759169329,0.35576626268671,0,0.402829317109147,0.760272105718513,0,0.735326160691737,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,13.1780417436063,19.3890132074163,0,0,0.25326102332916,0.132409180813219,0,0,0,1.06748995729705,0.24666754841716,0,0.134710672069688,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0.280901613404497,0,0.491337269247072,0.206651562351531,1.18800285728205,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0.226864366320042,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0.515281080091258,0.37223371266318,0.506328996723799,0,0,0.184099797284599,0.161646056818812,0.355009592516614,0.10075209822764,0.169560592310488,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0.721879481669586,0.236613600079688,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,1.44331342025273,0.34779121492523,0,0.288732895522148,0,0.761016608938393,0,0,1.23108503043699,2.57404691653161,1.63494278517601,0,0,0.283550194484773,0,0,0.383382679165211,6.89728533054321,0.352193736052904,0.207328115540772,0,0.12624243342638,0.126995788584338,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0.502257091432126,6.32501818449095,1.19812427745791,0,0,1.01346914667305,0.61642896765115,0.179060963239896,0.224170287987055,0.197030760201927,1.07813787429759,0.385029108839245,0,0,0,0.335032530668698,0,15.7291475028908,44.8742188806037,12.018049889645,0.36807447515742,0,0,0.207970861530807,0.535286966391485,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0.347534457872331,0.195801157462741,0,0.620304078368662,2.15714200818617,0.320182673410333,0,0,0,0.248107807818777,0.153461973288062,0.561320188866147,0.512556597022804,0,0.482561763430822,1.48418066444991,0.154209693802656,0,0.0821271560138091,0.519254429183621,0,0.120859449591622,0,0.184161977871793,0.34444334449382,0,0.524497659837696,0,0.385076685522074,0,0,0.105551628892876,0,0.510281115829547,0,1.54227252690289,0,0,0,0,0.223874754722178,0.438519753291869,0.261435451024901,0.256450125116389,0.328014645699706,0,0,0.27470839445503,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0,0,0.214840489736547,0.145016693914229,0.0852266274161009,0.178064071293475,0.330569830721956,0,0.255225424989168,0.2023155617111,0,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0.35667105148125,0,0.211107635297664,0.987884678879706,0,0,0.0962221127255121,0,0,0,0.4305053726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| |||
|short_description=p10@SLC12A6 | |||
}} |
Revision as of 22:44, 11 January 2014
Short description: | p10@SLC12A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SLC12A6_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -137bp_to_ENST00000397707, ENST00000560611, NM_001042497, NM_133647, uc001zhw.2, uc001zhx.2, uc001zhy.2, uc001zhz.2_5end |
EntrezGene: | SLC12A6 |
HGNC: | 10914 |
UniProt: | Q9UHW9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.48e-38 | 98 |
blood island | 2.48e-38 | 98 |
bone marrow | 2.47e-36 | 76 |
hemolymphoid system | 3.01e-35 | 108 |
bone element | 7.75e-33 | 82 |
immune system | 3.00e-29 | 93 |
skeletal element | 6.65e-29 | 90 |
skeletal system | 7.04e-25 | 100 |
lateral plate mesoderm | 8.72e-16 | 203 |
musculoskeletal system | 4.67e-12 | 167 |
connective tissue | 1.46e-10 | 371 |
mesoderm | 4.39e-07 | 315 |
mesoderm-derived structure | 4.39e-07 | 315 |
presumptive mesoderm | 4.39e-07 | 315 |