FFCP PHASE1:Hg19::chr16:50730853..50730871,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64127 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5331 | |||
|TSSclassifier=not | |||
|UniProt=Q9HC29 | |||
|association_with_transcript=-178bp_to_ENST00000300589,NM_022162,uc002egl.1,uc002egm.1_5end | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_2_at_NOD2_5end | |||
|id=chr16:50730853..50730871,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.34e-92!42;CL:0000860!2.66e-85!45;CL:0000766!4.15e-74!76;CL:0000738!3.77e-70!140;CL:0000557!8.60e-64!71;CL:0002009!3.95e-62!65;CL:0000839!2.38e-59!70;CL:0002031!2.80e-59!124;CL:0002194!1.03e-58!63;CL:0000576!1.03e-58!63;CL:0000040!1.03e-58!63;CL:0000559!1.03e-58!63;CL:0002087!2.25e-56!119;CL:0000037!2.34e-55!172;CL:0000566!2.34e-55!172;CL:0002032!7.32e-53!165;CL:0000837!7.32e-53!165;CL:0000988!2.80e-51!182;CL:0000763!2.14e-49!112;CL:0000049!2.14e-49!112;CL:0002393!5.04e-20!9;CL:0002397!5.04e-20!9;CL:0000134!1.38e-17!358;CL:0002320!6.85e-17!365;CL:0000219!1.91e-14!390;CL:0000094!8.43e-14!8;CL:0000048!1.51e-11!430;CL:0000034!3.13e-11!444;CL:0000723!3.88e-11!436;CL:0000081!1.08e-09!11;CL:0000624!1.59e-08!6;CL:0000767!7.03e-08!3;CL:0000791!1.62e-07!18;CL:0000789!1.62e-07!18;CL:0002420!1.62e-07!18;CL:0002419!1.62e-07!18;CL:0000790!1.62e-07!18;CL:0000875!1.86e-07!3;CL:0002396!1.86e-07!3;CL:0000623!8.44e-07!3;CL:0000825!8.44e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.30e-105;33!CL:0002057;2.30e-105;33!CL:0000576;1.50e-74;48!CL:0000473;2.54e-73;39!CL:0000234;2.54e-73;39!CL:0000766;3.40e-52;69!CL:0000763;8.25e-23;100!CL:0002393;1.05e-21;6!CL:0002397;1.05e-21;6!CL:0000094;4.39e-21;8!CL:0002087;5.38e-19;104!CL:0000081;4.54e-15;11!CL:0000738;7.35e-15;136!CL:0000767;1.51e-11;3!CL:0000988;1.78e-08;177!CL:0000771;4.67e-08;2!CL:0000219;1.83e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.91e-140,42;CL:0002057,2.91e-140,42;CL:0000473,1.62e-121,48;CL:0000234,1.62e-121,48;CL:0000766,2.73e-107,72;CL:0002009,1.76e-96,61;CL:0002194,2.86e-95,59;CL:0000576,2.86e-95,59;CL:0000040,2.86e-95,59;CL:0000559,2.86e-95,59;CL:0000557,4.26e-87,67;CL:0000839,2.68e-84,66;CL:0000763,1.84e-71,108;CL:0000049,1.84e-71,108;CL:0000738,4.73e-65,136;CL:0002087,1.22e-54,115;CL:0000037,1.10e-50,168;CL:0002031,2.32e-49,120;CL:0002032,8.24e-49,161;CL:0000837,8.24e-49,161;CL:0000988,1.43e-47,177;CL:0002393,7.07e-25,9;CL:0002397,7.07e-25,9;CL:0000094,2.59e-21,8;CL:0000134,2.35e-18,354;CL:0002320,8.75e-18,361;CL:0000219,8.97e-16,386;CL:0000081,3.12e-15,11;CL:0000034,2.32e-13,441;CL:0000048,2.60e-13,427;CL:0000723,5.68e-13,433;CL:0000767,1.26e-11,3;CL:0000771,3.76e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;3.80e-99;42!CL:0000049;1.03e-20;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.08e-59!102;UBERON:0003061!3.08e-59!102;UBERON:0002371!1.69e-57!80;UBERON:0002193!1.54e-52!112;UBERON:0001474!1.64e-52!86;UBERON:0004765!1.25e-42!101;UBERON:0001434!1.25e-42!101;UBERON:0002405!4.79e-39!115;UBERON:0003081!1.17e-20!216;UBERON:0002204!2.59e-20!167;UBERON:0002384!6.07e-16!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.20e-76,76;UBERON:0001474,1.43e-69,82;UBERON:0002390,5.13e-69,98;UBERON:0003061,5.13e-69,98;UBERON:0004765,1.38e-62,90;UBERON:0002193,9.78e-62,108;UBERON:0002405,2.85e-60,93;UBERON:0001434,2.08e-55,100;UBERON:0002204,2.34e-29,167;UBERON:0003081,3.81e-28,203;UBERON:0002384,5.25e-17,371;UBERON:0000926,1.78e-14,315;UBERON:0004120,1.78e-14,315;UBERON:0006603,1.78e-14,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,0.410502947249729,0.629686250509434,5.50709987588466,1.91914699048606,4.64448369948228,0,0,0,0,0,0.293600439334847,4.9859586767869,3.60980005446255,6.72733699219141,0,0,0,1.16318591023652,1.13362783106643,2.42584061187816,3.0215774797739,2.05583944010913,3.09706370895104,11.7953880852082,11.2710710872804,25.5400808279672,9.3081333798887,5.16387746867061,5.41705946377367,4.1413314699373,1.63743690034707,5.61808711112712,10.4068523406107,3.20929027076094,11.5080682643827,5.93732340336089,7.18069167437875,10.2293940127847,5.22376629531451,3.40431134814684,4.9825779919646,10.3011952755265,13.037072960505,25.4110948304986,3.63239701580021,5.52416453981347,12.9749578850763,2.5350634357433,5.52771179909113,3.14487968262564,4.26848798356681,3.00353785683013,1.44653028027372,4.56020389985998,1.79025009479181,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,0.393419540227666,0.786021525498329,0.822405995998037,0,0,0,0,0,1.17842362989935,0.886135578334485,0,0,0.260118695119756,0,0,0,0,0,0,0,0.383220493601921,0,0.506039384039006,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,1.33720097891754,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.829312462163088,0.144119953416961,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,0.431255149719035,0.385029108839245,0,0,0,0,0,2.99602809578873,0,3.72973962092432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01999881146064,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0.411362273086194,1.94541993357815,1.62009431171434,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,1.5476039091159,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@NOD2 | |||
}} |
Revision as of 03:32, 12 January 2014
Short description: | p2@NOD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NOD2_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -178bp_to_ENST00000300589, NM_022162, uc002egl.1, uc002egm.1_5end |
EntrezGene: | NOD2 |
HGNC: | 5331 |
UniProt: | Q9HC29 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.20e-76 | 76 |
bone element | 1.43e-69 | 82 |
hematopoietic system | 5.13e-69 | 98 |
blood island | 5.13e-69 | 98 |
skeletal element | 1.38e-62 | 90 |
hemolymphoid system | 9.78e-62 | 108 |
immune system | 2.85e-60 | 93 |
skeletal system | 2.08e-55 | 100 |
musculoskeletal system | 2.34e-29 | 167 |
lateral plate mesoderm | 3.81e-28 | 203 |
connective tissue | 5.25e-17 | 371 |
mesoderm | 1.78e-14 | 315 |
mesoderm-derived structure | 1.78e-14 | 315 |
presumptive mesoderm | 1.78e-14 | 315 |