FFCP PHASE1:Hg19::chr17:66527771..66527846,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=5573 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9388 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-57bp_to_AL050038_5end | |||
|description=CAGE_peak_4_at_PRKAR1A_5end | |||
|id=chr17:66527771..66527846,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.31e-09!57;UBERON:0005068!2.31e-09!57;UBERON:0006241!2.31e-09!57;UBERON:0007135!2.31e-09!57;UBERON:0002780!3.21e-08!41;UBERON:0001890!3.21e-08!41;UBERON:0006240!3.21e-08!41;UBERON:0003080!4.17e-08!42;UBERON:0002020!5.69e-08!34;UBERON:0003528!5.69e-08!34;UBERON:0002616!1.11e-07!59;UBERON:0007023!1.79e-07!115;UBERON:0002346!7.98e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;9.55e-07;34!UBERON:0002020;9.55e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.19e-09,56;UBERON:0005068,2.19e-09,56;UBERON:0006241,2.19e-09,56;UBERON:0007135,2.19e-09,56;UBERON:0000073,2.57e-08,53;UBERON:0002616,2.57e-08,53;UBERON:0002346,3.42e-08,86;UBERON:0002780,8.97e-08,41;UBERON:0001890,8.97e-08,41;UBERON:0003080,8.97e-08,41;UBERON:0006240,8.97e-08,41;UBERON:0003528,1.46e-07,34;UBERON:0002020,1.46e-07,34;UBERON:0003075,2.12e-07,82;UBERON:0007284,2.12e-07,82;UBERON:0010371,5.20e-07,104 | |||
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| |||
|short_description=p4@PRKAR1A | |||
}} |
Revision as of 17:01, 20 January 2014
Short description: | p4@PRKAR1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_4_at_PRKAR1A_5end |
Coexpression cluster: | NA |
Association with transcript: | -57bp_to_AL050038_5end |
EntrezGene: | PRKAR1A |
HGNC: | 9388 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 2.19e-09 | 56 |
neural rod | 2.19e-09 | 56 |
future spinal cord | 2.19e-09 | 56 |
neural keel | 2.19e-09 | 56 |
regional part of nervous system | 2.57e-08 | 53 |
regional part of brain | 2.57e-08 | 53 |
neurectoderm | 3.42e-08 | 86 |
regional part of forebrain | 8.97e-08 | 41 |
forebrain | 8.97e-08 | 41 |
anterior neural tube | 8.97e-08 | 41 |
future forebrain | 8.97e-08 | 41 |
brain grey matter | 1.46e-07 | 34 |
gray matter | 1.46e-07 | 34 |
neural plate | 2.12e-07 | 82 |
presumptive neural plate | 2.12e-07 | 82 |
ecto-epithelium | 5.20e-07 | 104 |