FFCP PHASE1:Hg19::chr18:56985798..56985815,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339302 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24330 | |||
|TSSclassifier=strong | |||
|UniProt=F1T0L6,Q7Z7G2 | |||
|association_with_transcript=65bp_to_ENST00000299721,NM_181654,uc002lhy.2_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_2_at_CPLX4_5end | |||
|id=chr18:56985798..56985815,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.91e-44;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!3.44e-25!2;UBERON:0002757!3.44e-25!2;UBERON:0010134!3.44e-25!2;UBERON:0002784!3.44e-25!2;UBERON:0005408!3.44e-25!2;UBERON:0001899!3.44e-25!2;UBERON:0003075!7.71e-18!86;UBERON:0007284!7.71e-18!86;UBERON:0002346!5.50e-17!90;UBERON:0005743!1.04e-14!86;UBERON:0000073!3.28e-13!94;UBERON:0001016!3.28e-13!94;UBERON:0003296!4.24e-13!4;UBERON:0010133!4.24e-13!4;UBERON:0007190!9.73e-13!1;UBERON:0003076!1.05e-12!15;UBERON:0003057!1.05e-12!15;UBERON:0001017!1.07e-12!82;UBERON:0002336!1.09e-12!1;UBERON:0001018!1.09e-12!1;UBERON:0002473!1.09e-12!1;UBERON:0005340!1.09e-12!1;UBERON:0002316!1.09e-12!1;UBERON:0003544!1.09e-12!1;UBERON:0001020!1.09e-12!1;UBERON:0005970!1.09e-12!1;UBERON:0002437!1.09e-12!1;UBERON:0002680!2.81e-12!9;UBERON:0001895!2.81e-12!9;UBERON:0010092!2.81e-12!9;UBERON:0001049!4.73e-12!57;UBERON:0005068!4.73e-12!57;UBERON:0006241!4.73e-12!57;UBERON:0007135!4.73e-12!57;UBERON:0000966!1.54e-10!5;UBERON:0005388!1.54e-10!5;UBERON:0001802!1.54e-10!5;UBERON:0000970!8.51e-10!20;UBERON:0000955!1.00e-09!69;UBERON:0006238!1.00e-09!69;UBERON:0004733!2.39e-09!12;UBERON:0002028!2.39e-09!12;UBERON:0007277!2.39e-09!12;UBERON:0002104!2.44e-09!21;UBERON:0002616!6.00e-09!59;UBERON:0007023!6.36e-09!115;UBERON:0002037!8.91e-09!6;UBERON:0006215!8.91e-09!6;UBERON:0003056!1.04e-08!61;UBERON:0004732!1.14e-08!13;UBERON:0000020!1.52e-08!23;UBERON:0004121!3.25e-08!169;UBERON:0001032!3.40e-08!24;UBERON:0004456!3.40e-08!24;UBERON:0000033!4.06e-08!123;UBERON:0000924!5.46e-08!173;UBERON:0006601!5.46e-08!173;UBERON:0001894!7.30e-08!7;UBERON:0006222!7.30e-08!7;UBERON:0000153!1.10e-07!129;UBERON:0007811!1.10e-07!129;UBERON:0002360!2.91e-07!2;UBERON:0000094!2.91e-07!2;UBERON:0007645!2.91e-07!2;UBERON:0002148!4.42e-07!2;UBERON:0009662!4.42e-07!2;UBERON:0005162!5.60e-07!2;UBERON:0000122!5.60e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;7.41e-67;2!UBERON:0002757;7.41e-67;2!UBERON:0010134;7.41e-67;2!UBERON:0005408;7.41e-67;2!UBERON:0001899;7.41e-67;2!UBERON:0003296;4.28e-34;4!UBERON:0010133;4.28e-34;4!UBERON:0002784;4.28e-34;4!UBERON:0000966;3.55e-27;5!UBERON:0005388;3.55e-27;5!UBERON:0001802;3.55e-27;5!UBERON:0001894;5.35e-20;7!UBERON:0002360;1.27e-17;2!UBERON:0000094;1.27e-17;2!UBERON:0010743;1.27e-17;2!UBERON:0000970;1.43e-15;20!UBERON:0002104;7.18e-15;21!UBERON:0000020;1.20e-13;23!UBERON:0001032;4.11e-13;24!UBERON:0004456;4.11e-13;24!UBERON:0000019;6.36e-08;19!UBERON:0000047;6.36e-08;19!UBERON:0004088;6.36e-08;19!UBERON:0010230;6.36e-08;19!UBERON:0001456;2.95e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,7.41e-67,2;UBERON:0002757,7.41e-67,2;UBERON:0010134,7.41e-67,2;UBERON:0005408,7.41e-67,2;UBERON:0001899,7.41e-67,2;UBERON:0003296,4.28e-34,4;UBERON:0010133,4.28e-34,4;UBERON:0002784,4.28e-34,4;UBERON:0000966,7.58e-23,6;UBERON:0005388,7.58e-23,6;UBERON:0001802,7.58e-23,6;UBERON:0001894,5.35e-20,7;UBERON:0006222,5.35e-20,7;UBERON:0002360,1.27e-17,2;UBERON:0000094,1.27e-17,2;UBERON:0010743,1.27e-17,2;UBERON:0000970,7.18e-15,21;UBERON:0002104,7.18e-15,21;UBERON:0000020,4.11e-13,24;UBERON:0001032,4.11e-13,24;UBERON:0004456,4.11e-13,24;UBERON:0003056,4.15e-09,61;UBERON:0000019,1.42e-07,20;UBERON:0000047,1.42e-07,20;UBERON:0010312,1.42e-07,20;UBERON:0004088,1.42e-07,20;UBERON:0010230,1.42e-07,20;UBERON:0003072,1.42e-07,20;UBERON:0004128,1.42e-07,20;UBERON:0003071,1.42e-07,20;UBERON:0001456,5.74e-07,22;UBERON:0003075,6.33e-07,82;UBERON:0007284,6.33e-07,82;UBERON:0001017,6.43e-07,81 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0.221158519862449,0.295547618953547,3.51016635446356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.9877851897612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,171.96028931693,388.071415440523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.43423221284545,18.9616334079272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@CPLX4 | |||
}} |
Revision as of 19:35, 20 January 2014
Short description: | p2@CPLX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CPLX4_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 65bp_to_ENST00000299721, NM_181654, uc002lhy.2_5end |
EntrezGene: | CPLX4 |
HGNC: | 24330 |
UniProt: | F1T0L6Q7Z7G2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 7.41e-67 | 2 |
regional part of epithalamus | 7.41e-67 | 2 |
secretory circumventricular organ | 7.41e-67 | 2 |
circumventricular organ | 7.41e-67 | 2 |
epithalamus | 7.41e-67 | 2 |
gland of diencephalon | 4.28e-34 | 4 |
neuroendocrine gland | 4.28e-34 | 4 |
regional part of diencephalon | 4.28e-34 | 4 |
retina | 7.58e-23 | 6 |
photoreceptor array | 7.58e-23 | 6 |
posterior segment of eyeball | 7.58e-23 | 6 |
diencephalon | 5.35e-20 | 7 |
future diencephalon | 5.35e-20 | 7 |
meninx | 1.27e-17 | 2 |
membrane organ | 1.27e-17 | 2 |
meningeal cluster | 1.27e-17 | 2 |
eye | 7.18e-15 | 21 |
visual system | 7.18e-15 | 21 |
sense organ | 4.11e-13 | 24 |
sensory system | 4.11e-13 | 24 |
entire sense organ system | 4.11e-13 | 24 |
pre-chordal neural plate | 4.15e-09 | 61 |
camera-type eye | 1.42e-07 | 20 |
simple eye | 1.42e-07 | 20 |
immature eye | 1.42e-07 | 20 |
ocular region | 1.42e-07 | 20 |
eyeball of camera-type eye | 1.42e-07 | 20 |
optic cup | 1.42e-07 | 20 |
optic vesicle | 1.42e-07 | 20 |
eye primordium | 1.42e-07 | 20 |
face | 5.74e-07 | 22 |
neural plate | 6.33e-07 | 82 |
presumptive neural plate | 6.33e-07 | 82 |
central nervous system | 6.43e-07 | 81 |