FFCP PHASE1:Hg19::chr19:51714304..51714315,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:51714304..51714315,+ | |||
|id=chr19:51714304..51714315,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.63e-60!112;CL:0000049!1.63e-60!112;CL:0000037!1.87e-51!172;CL:0000566!1.87e-51!172;CL:0002032!2.32e-47!165;CL:0000837!2.32e-47!165;CL:0000988!3.99e-47!182;CL:0000766!7.01e-37!76;CL:0000557!7.41e-37!71;CL:0000839!6.14e-34!70;CL:0002009!2.06e-31!65;CL:0002194!3.48e-31!63;CL:0000576!3.48e-31!63;CL:0000040!3.48e-31!63;CL:0000559!3.48e-31!63;CL:0000738!3.65e-28!140;CL:0002031!2.98e-24!124;CL:0002087!3.22e-23!119;CL:0000860!1.51e-21!45;CL:0002057!2.56e-20!42;CL:0002393!8.71e-14!9;CL:0002397!8.71e-14!9;CL:0000134!1.31e-12!358;CL:0002320!6.50e-12!365;CL:0000219!6.23e-10!390;CL:0000048!9.39e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000875;2.57e-18;3!CL:0002396;2.57e-18;3!CL:0000763;4.60e-18;100!CL:0000766;3.66e-11;69!CL:0000097;4.43e-11;5!CL:0002032;6.68e-07;1!CL:0000557;6.68e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,5.87e-39,108;CL:0000049,5.87e-39,108;CL:0002032,2.33e-24,161;CL:0000837,2.33e-24,161;CL:0000037,4.10e-23,168;CL:0000988,1.18e-21,177;CL:0000875,2.50e-18,3;CL:0002396,2.50e-18,3;CL:0000557,5.88e-18,67;CL:0000839,6.01e-16,66;CL:0002393,6.91e-16,9;CL:0002397,6.91e-16,9;CL:0000766,2.21e-14,72;CL:0000473,3.25e-12,48;CL:0000234,3.25e-12,48;CL:0002194,3.20e-11,59;CL:0000576,3.20e-11,59;CL:0000040,3.20e-11,59;CL:0000559,3.20e-11,59;CL:0000097,3.67e-11,5;CL:0002028,3.67e-11,5;CL:0002009,8.72e-11,61;CL:0000860,1.94e-09,42;CL:0002057,1.94e-09,42;CL:0000134,5.77e-08,354;CL:0002320,1.07e-07,361;CL:0002031,1.76e-07,120;CL:0000219,9.30e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000049;1.53e-12;108!CL:0002057;3.38e-07;42 | |||
|ontology_enrichment_disease=DOID:8692!4.02e-30!31;DOID:1240!4.74e-28!39;DOID:2531!1.11e-25!51;DOID:0060083!1.11e-25!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;8.26e-32;31!DOID:1240;6.38e-19;39!DOID:2531;1.57e-12;51!DOID:0060083;1.57e-12;51!DOID:8552;1.64e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.24e-34,31;DOID:1240,1.35e-26,39;DOID:2531,1.35e-22,51;DOID:0060083,1.35e-22,51;DOID:8552,1.55e-07,1;DOID:0050686,1.71e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.59e-46!102;UBERON:0003061!8.59e-46!102;UBERON:0002193!5.08e-43!112;UBERON:0002371!3.12e-34!80;UBERON:0001474!9.79e-31!86;UBERON:0002405!4.99e-27!115;UBERON:0004765!7.43e-24!101;UBERON:0001434!7.43e-24!101;UBERON:0003081!4.06e-14!216;UBERON:0002384!1.80e-11!375;UBERON:0002204!6.69e-09!167;UBERON:0000178!3.30e-08!15;UBERON:0000179!3.30e-08!15;UBERON:0000463!3.30e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;6.68e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.68e-16,98;UBERON:0003061,1.68e-16,98;UBERON:0002193,1.90e-16,108;UBERON:0002405,1.15e-15,93;UBERON:0002371,1.81e-15,76;UBERON:0001474,4.14e-14,82;UBERON:0004765,1.41e-12,90;UBERON:0001434,5.24e-11,100;UBERON:0002384,2.47e-07,371;UBERON:0000029,4.06e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0,0.393364276848904,0.767658796194425,0.464448369948228,0,0,0,0,0,0.293600439334847,0.553995408531877,0.601633342410425,1.30206522429511,0.223915474239924,0.32389366601898,0.257575567634187,0.872389432677388,0,0.727752183563449,0.232429036905685,0,0.309706370895104,0.28769239232215,1.0246428261164,0.47296445977717,0,0,0,0.752969358170419,0,0.674170453335254,0,0,0,0,0.398927315243264,0.852449501065388,0,0,0,0.75374599577023,0.521482918420201,0.65156653411535,0.605399502633369,0,0,0.211255286311942,1.4882300997553,0.628975936525128,1.68492946719743,1.20141514273205,1.44653028027372,3.13514018115373,2.18808344918999,1.46131323011707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0.531831842075461,0.238490624305342,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702012795417713,1.48631162288728,0,0,0,0,0,0,0,0.264145302039678,2.07328115540772,1.8735593944205,2.5248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0.448340575974109,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,0.238231775457789,0.411362273086194,0,0.540031437238115,1.58625035258854,0,0,0,0,0.577076851905779,0,0,0.399158742865633,0.191505370132367,1.90506224451495,0.649243880549111,0.561594356226918,0.456469358066384,1.09675927041116,2.50634477090067,0.169291777801603,2.40882112655549,2.21979677910152,2.12923118845163,0.687010689511529,0.921722292925374,1.3420566473545,0.667396566847634,2.14926904942244,0.835218521685727,0,2.16364542780786,0.66614393599564,1.4098700508785,2.05854594449042,0.293016358543788,0,0.445773537109913,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,7.67358555340308,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.70390775964567,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.470940769185074,3.98908036560375,0,0,0,0,2.70192184266644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.568679216656392,0,0,0,0,0,0,0,0.970722711091971,0,0,0,0.34945333648406,0,0.290268993867255,0.438535902517113,0,0.193978032976839,0,0,0.685209623233754,0.397429223405979,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0,0.662091970365432,0,0,0,0,0,2.54486814322951,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0.414239055347196,1.9846640872478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.688859918643263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552032215008773,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0.297046400327086,0,0,0.469919589899268,0.322289439867886,1.19929387109915,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0.0645889098360061,0,0.897054900644907,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |||
|short_description=p@chr19:51714304..51714315,+ | |||
}} |
Revision as of 00:47, 21 January 2014
Short description: | p@chr19:51714304..51714315, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:51714304..51714315, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 5.87e-39 | 108 |
common myeloid progenitor | 5.87e-39 | 108 |
hematopoietic oligopotent progenitor cell | 2.33e-24 | 161 |
hematopoietic multipotent progenitor cell | 2.33e-24 | 161 |
hematopoietic stem cell | 4.10e-23 | 168 |
hematopoietic cell | 1.18e-21 | 177 |
non-classical monocyte | 2.50e-18 | 3 |
CD14-low, CD16-positive monocyte | 2.50e-18 | 3 |
granulocyte monocyte progenitor cell | 5.88e-18 | 67 |
myeloid lineage restricted progenitor cell | 6.01e-16 | 66 |
intermediate monocyte | 6.91e-16 | 9 |
CD14-positive, CD16-positive monocyte | 6.91e-16 | 9 |
myeloid leukocyte | 2.21e-14 | 72 |
defensive cell | 3.25e-12 | 48 |
phagocyte | 3.25e-12 | 48 |
monopoietic cell | 3.20e-11 | 59 |
monocyte | 3.20e-11 | 59 |
monoblast | 3.20e-11 | 59 |
promonocyte | 3.20e-11 | 59 |
mast cell | 3.67e-11 | 5 |
basophil mast progenitor cell | 3.67e-11 | 5 |
macrophage dendritic cell progenitor | 8.72e-11 | 61 |
classical monocyte | 1.94e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.94e-09 | 42 |
mesenchymal cell | 5.77e-08 | 354 |
connective tissue cell | 1.07e-07 | 361 |
hematopoietic lineage restricted progenitor cell | 1.76e-07 | 120 |
motile cell | 9.30e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.68e-16 | 98 |
blood island | 1.68e-16 | 98 |
hemolymphoid system | 1.90e-16 | 108 |
immune system | 1.15e-15 | 93 |
bone marrow | 1.81e-15 | 76 |
bone element | 4.14e-14 | 82 |
skeletal element | 1.41e-12 | 90 |
skeletal system | 5.24e-11 | 100 |
connective tissue | 2.47e-07 | 371 |
lymph node | 4.06e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.24e-34 | 31 |
leukemia | 1.35e-26 | 39 |
hematologic cancer | 1.35e-22 | 51 |
immune system cancer | 1.35e-22 | 51 |
chronic myeloid leukemia | 1.55e-07 | 1 |
organ system cancer | 1.71e-07 | 137 |