FFCP PHASE1:Hg19::chr19:55851236..55851285,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84787 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28405 | |||
|TSSclassifier=strong | |||
|UniProt=B5MCX9,F8WB64,F5GYW4 | |||
|association_with_transcript=0bp_to_ENST00000402499,ENST00000445196,ENST00000498738,ENST00000539076_5end | |||
|description=CAGE_peak_1_at_SUV420H2_5end | |||
|id=chr19:55851236..55851285,+ | |||
|ontology_enrichment_celltype=CL:0000988!8.65e-09!182;CL:0000037!4.23e-08!172;CL:0000566!4.23e-08!172;CL:0002032!2.65e-07!165;CL:0000837!2.65e-07!165 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.70e-08,177;CL:0000037,1.57e-07,168;CL:0002032,9.32e-07,161;CL:0000837,9.32e-07,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.77e-15!235;DOID:14566!1.76e-13!239;DOID:0050686!1.46e-11!137;DOID:305!3.28e-10!106;DOID:1240!5.14e-10!39;DOID:0050687!5.84e-10!143;DOID:8692!3.46e-09!31;DOID:2531!4.06e-09!51;DOID:0060083!4.06e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.83e-09;31!DOID:1240;4.56e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.77e-15,235;DOID:14566,1.76e-13,239;DOID:0050686,1.46e-11,137;DOID:305,3.28e-10,106;DOID:1240,5.14e-10,39;DOID:0050687,5.84e-10,143;DOID:8692,3.46e-09,31;DOID:2531,4.06e-09,51;DOID:0060083,4.06e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0001017!7.04e-07!82;UBERON:0001049!7.90e-07!57;UBERON:0005068!7.90e-07!57;UBERON:0006241!7.90e-07!57;UBERON:0007135!7.90e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.10e-07,56;UBERON:0005068,3.10e-07,56;UBERON:0006241,3.10e-07,56;UBERON:0007135,3.10e-07,56;UBERON:0001017,3.31e-07,81;UBERON:0000073,4.57e-07,53;UBERON:0002616,4.57e-07,53;UBERON:0001016,8.99e-07,89 | |||
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| |||
|short_description=p1@SUV420H2 | |||
}} |
Revision as of 01:12, 21 January 2014
Short description: | p1@SUV420H2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SUV420H2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000402499, ENST00000445196, ENST00000498738, ENST00000539076_5end |
EntrezGene: | SUV420H2 |
HGNC: | 28405 |
UniProt: | B5MCX9F8WB64F5GYW4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.70e-08 | 177 |
hematopoietic stem cell | 1.57e-07 | 168 |
hematopoietic oligopotent progenitor cell | 9.32e-07 | 161 |
hematopoietic multipotent progenitor cell | 9.32e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
neural tube | 3.10e-07 | 56 |
neural rod | 3.10e-07 | 56 |
future spinal cord | 3.10e-07 | 56 |
neural keel | 3.10e-07 | 56 |
central nervous system | 3.31e-07 | 81 |
regional part of nervous system | 4.57e-07 | 53 |
regional part of brain | 4.57e-07 | 53 |
nervous system | 8.99e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.77e-15 | 235 |
disease of cellular proliferation | 1.76e-13 | 239 |
organ system cancer | 1.46e-11 | 137 |
carcinoma | 3.28e-10 | 106 |
leukemia | 5.14e-10 | 39 |
cell type cancer | 5.84e-10 | 143 |
myeloid leukemia | 3.46e-09 | 31 |
hematologic cancer | 4.06e-09 | 51 |
immune system cancer | 4.06e-09 | 51 |