FFCP PHASE1:Hg19::chr2:114647617..114647739,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10096 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=170 | |||
|TSSclassifier=strong | |||
|UniProt=F8WEW2,F8WDR7,F8WE84,F5H3P5,B4DTI0 | |||
|association_with_transcript=0bp_to_ENST00000415792,ENST00000443297,ENST00000446821,ENST00000536059,ENST00000544784_5end | |||
|coexpression_cluster_id=C1246 | |||
|description=CAGE_peak_1_at_ACTR3_5end | |||
|id=chr2:114647617..114647739,+ | |||
|ontology_enrichment_celltype=CL:0000048!4.51e-42!430;CL:0000723!4.51e-41!436;CL:0000034!9.24e-39!444;CL:0000134!4.24e-35!358;CL:0002032!1.77e-34!165;CL:0000837!1.77e-34!165;CL:0000037!1.49e-33!172;CL:0000566!1.49e-33!172;CL:0002320!5.68e-33!365;CL:0000738!8.91e-33!140;CL:0002371!3.16e-32!591;CL:0000988!1.85e-31!182;CL:0000763!3.40e-31!112;CL:0000049!3.40e-31!112;CL:0000144!6.48e-31!625;CL:0000003!3.19e-30!722;CL:0002031!1.44e-29!124;CL:0000766!2.20e-29!76;CL:0000219!8.55e-29!390;CL:0002009!8.94e-29!65;CL:0002087!2.90e-28!119;CL:0000557!8.31e-28!71;CL:0002194!1.38e-27!63;CL:0000576!1.38e-27!63;CL:0000040!1.38e-27!63;CL:0000559!1.38e-27!63;CL:0000839!3.72e-27!70;CL:0002057!2.71e-25!42;CL:0000012!7.59e-24!682;CL:0000548!9.40e-24!679;CL:0000004!9.40e-24!679;CL:0000255!9.40e-24!679;CL:0000860!3.23e-21!45;CL:0000063!1.17e-18!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.03e-19;33!CL:0002057;2.03e-19;33!CL:0000473;2.58e-19;39!CL:0000234;2.58e-19;39!CL:0000576;2.56e-17;48!CL:0000766;2.37e-14;69!CL:0000763;2.30e-09;100!CL:0000738;2.61e-09;136!CL:0002087;1.72e-08;104!CL:0000219;2.62e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,4.64e-44,427;CL:0000723,5.00e-43,433;CL:0000034,1.20e-40,441;CL:0000134,4.24e-37,354;CL:0002032,1.26e-36,161;CL:0000837,1.26e-36,161;CL:0000037,1.34e-35,168;CL:0000738,4.21e-35,136;CL:0002320,6.88e-35,361;CL:0000988,6.20e-34,177;CL:0000763,7.85e-34,108;CL:0000049,7.85e-34,108;CL:0000766,9.28e-33,72;CL:0002009,1.58e-32,61;CL:0002031,6.30e-32,120;CL:0002194,2.60e-31,59;CL:0000576,2.60e-31,59;CL:0000040,2.60e-31,59;CL:0000559,2.60e-31,59;CL:0000557,3.20e-31,67;CL:0002087,1.28e-30,115;CL:0000839,1.51e-30,66;CL:0000219,1.59e-30,386;CL:0000473,6.19e-29,48;CL:0000234,6.19e-29,48;CL:0000860,2.71e-25,42;CL:0002057,2.71e-25,42 | |||
|ontology_enrichment_development_v019=CL:0002057;2.16e-18;42!CL:0000049;5.05e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.97e-32!375;UBERON:0002390!9.77e-30!102;UBERON:0003061!9.77e-30!102;UBERON:0002193!2.32e-28!112;UBERON:0002371!1.58e-24!80;UBERON:0001474!3.95e-22!86;UBERON:0004765!8.80e-21!101;UBERON:0001434!8.80e-21!101;UBERON:0002204!1.26e-20!167;UBERON:0003081!3.14e-17!216;UBERON:0002405!6.01e-16!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.61e-34,371;UBERON:0002390,1.82e-32,98;UBERON:0003061,1.82e-32,98;UBERON:0002193,7.94e-31,108;UBERON:0002371,2.27e-27,76;UBERON:0002405,1.07e-25,93;UBERON:0001474,1.24e-24,82;UBERON:0004765,9.80e-24,90;UBERON:0001434,6.56e-22,100;UBERON:0002204,2.33e-21,167;UBERON:0003081,9.66e-21,203;UBERON:0000926,3.56e-16,315;UBERON:0004120,3.56e-16,315;UBERON:0006603,3.56e-16,315 | |||
|phase1_expression=389.518445156073,249.213009809104,306.152965696449,232.170052179263,178.784437770915,208.488907259988,200.106903752965,216.048196711976,73.3931615241546,102.716785457631,50.9394852619872,85.4105765028974,78.0750255556223,167.208342849023,123.94261852224,408.101363896228,449.610117905887,419.92830197274,407.911819788864,79.4130824595282,64.8722198156725,60.810215966749,208.379798631409,240.762113703203,242.799464976349,350.661118977348,372.244072566054,377.182064055151,195.108681317056,231.449127052619,204.666915023852,148.946238365586,105.723277491166,124.237347416041,314.904170358926,258.179326197157,152.965828893455,382.256831886995,339.12066067201,310.7595668651,351.771210030921,343.327285980118,355.454283335177,460.767018692441,529.782073051711,534.412686796759,757.718660312532,845.772345660896,909.917317689814,887.531030313834,744.659173880096,920.152356496485,803.602181797058,753.280625742325,827.455833091428,564.350533948729,737.665323606357,852.376176500206,931.107200592286,936.470901008041,976.267791095136,572.292005823952,557.700386710083,570.288716212745,1333.80166073697,1476.90373987104,1563.90666722789,720.832420621596,651.332165106832,741.265526978563,1055.8167325926,1290.07655886444,1376.61138536785,601.443800130098,530.660332712749,504.438701093152,365.742023012988,358.021712534151,465.943475834835,432.934357742957,591.777114667293,623.798085106225,334.392864476513,372.466532880774,367.367321845648,349.918782504536,395.991631178616,335.655424933418,347.709603084837,340.597190369125,268.09930845055,248.401331103907,221.718472312633,155.962167723251,194.496471354593,192.006997801031,139.07380747048,101.789787552034,177.639695135576,506.575081033755,154.813076650955,152.450193446584,212.361133964623,454.109022263968,260.137016300281,288.215596853291,349.066180393105,398.748278306027,403.834274173422,408.628192940135,384.402874740115,474.697454434016,218.722680664039,226.071999735808,234.159573323148,531.080889223493,214.603476417076,219.234310217918,339.299406998153,318.246848909773,292.987554235388,281.333805156719,312.443372086379,357.594591565445,342.310190753428,334.80303439024,280.004646950077,130.842776352851,123.55737045198,115.135401086825,173.102875082913,201.210257911091,280.146872999175,211.080464992587,199.031150522448,153.392463579512,337.996527496717,100.733418152646,282.280964051907,261.1972302109,262.71384400814,59.9884165779524,51.729930937541,76.7523796563769,595.544467356344,620.598383734588,541.803689114376,159.550227660274,201.342208594605,153.41194804911,276.677271054454,216.779117966743,198.911507421152,218.208865582668,165.702277302913,261.912375926944,218.608734997504,262.809844075207,332.641455612074,338.067818892317,193.7609015295,181.705033266725,187.927784312091,248.540242313807,188.76307385645,241.734364465004,177.827263119926,215.425762164595,182.446798584401,168.020021743559,198.773892164492,1027.88725600129,1403.76455621694,53.2034743613892,323.528740553652,352.159452939196,378.557847944993,224.593074046321,231.598453575527,264.079149667027,312.774557488036,246.420880868743,219.092568921435,236.686650826442,222.308188234304,83.5493000600021,161.3292588544,75.2171796186487,226.940375855643,175.134849214146,266.915343465517,164.878036095846,190.686328465659,167.276910782378,221.915584154069,206.607321718394,193.632513923384,281.556677175847,291.527709619419,61.8909726117858,56.0522150616666,225.570392698449,189.554557606026,306.987039956475,336.256857594722,384.335695931971,248.643987490418,377.16200900707,423.897709132781,290.010934015615,343.965475581969,340.003211863628,331.41693403082,439.534761317843,343.01336621912,415.696106310239,405.63025248607,389.757747432913,321.162096362982,177.164078273418,471.097729269547,502.55146595947,370.998575975347,380.337359025368,343.660111944452,334.700962818967,73.550144796146,74.2166702600317,79.0118811512725,87.9045746530341,107.236361622142,60.5862416065878,431.800709230292,346.063624747772,243.117461580366,288.372483307859,306.798779709574,141.968160047813,170.944875739195,163.164467231117,147.463041543211,155.348043637886,147.10778384888,147.9099450517,154.033850123397,144.664931011843,86.3641881910838,49.084620831206,72.025451982995,35.2820907325301,77.3205712413168,147.424082501644,101.615863949202,137.295023917956,127.293033892123,276.395742390925,232.231603924652,131.510051311415,210.608197202367,179.066052936596,67.7681275045475,37.4376522700648,310.312385354338,154.419299426802,369.132934677423,208.898249910274,202.787654508556,234.773623857494,60.8457386428642,54.9431143740718,637.702045766359,876.813981476724,666.759394027235,353.376554130149,419.283391984353,385.061164110322,271.810116403145,201.118685451662,129.199962878676,648.837484308958,377.111442878647,149.276243189356,151.614190994643,144.547586273205,312.346142023179,155.469289202219,131.283540875253,126.593610056802,139.2284251203,246.8819935477,241.523335572839,126.820256394603,160.433305330647,335.155966201742,386.005343252724,82.260982545933,240.065981725904,483.741434067879,407.709152692555,66.1022951853705,43.9732309272163,73.2660992294273,201.170037077014,36.3556475612267,67.505707616023,307.494957973286,193.333220115945,178.189171410022,333.090511650843,384.34625524273,376.898176756355,485.27888475835,548.967000935314,649.368533607737,516.151938728869,248.101781401686,276.715595778994,408.283284802573,229.106099643678,343.43892749412,278.979923399889,161.368192605378,112.341966501809,140.278938653765,226.398310182215,141.852440704808,131.459098172208,137.5308538395,107.173710277731,897.310414688724,942.358596492679,1491.06701734286,148.211321996721,150.051156317903,173.609615167831,282.840371681898,316.533026126165,275.34841664925,237.679931020215,206.148078313487,136.444502433591,162.452721929233,433.73931584364,368.922706251948,330.939687508928,26.43315625747,31.5691949905987,258.046496601363,232.971336884106,243.55228690746,50.3191768600791,76.5603021748287,68.6425965858374,294.752075688707,567.041991299391,274.485572355546,232.059999302074,350.519465610692,318.973325627774,145.449705116091,330.934002900499,280.547525994741,327.112462403002,315.187438514458,251.363048608892,128.594454365486,280.508551954296,216.022000043613,350.872953591038,288.614501290647,224.484998410534,76.70393419426,278.795520317981,41.5705377663733,68.6854355870325,278.97295516387,42.0813521062317,92.5309756704245,277.667868107351,84.8249889796591,75.5940560747349,45.1520796469368,113.674817778087,72.303612776799,100.295890115536,312.664584097103,309.801009464507,118.479957803772,61.338738745845,175.378954724059,120.248860592892,165.649161856383,178.22051982847,241.191525958392,240.522291033513,297.265270211695,138.819151467487,164.677971695555,153.50367472613,163.749848111622,232.027728915471,186.636485067612,210.594996345185,211.273020589708,337.346512251756,263.684772424926,221.790894315587,231.044371474076,329.110648902478,326.460403663374,225.143038261874,275.998087837776,253.377670430902,221.832912979144,441.07164146733,435.385905469137,287.306261145663,303.407868305258,320.258725792026,42.7349311489928,181.874069914416,109.143714038596,307.699866958098,313.157948652551,233.905549335119,257.537911527671,237.564415848646,199.72300467799,321.841460566582,45.3499377353319,299.280165267217,181.718252421619,290.74481129901,236.995503954423,128.829252947077,142.803623978446,305.845367586202,314.807735612202,61.3502066322689,205.950952142643,423.473956721163,326.244143499037,190.98961851686,302.741364502753,406.161535548243,410.8850513064,274.939824654713,149.041990520151,128.754303147322,47.8136198944801,83.2844634183059,172.911136567745,116.632595943227,112.157714407162,129.541869868848,71.0333864907529,62.3344459970215,66.0710928769647,242.128463818135,434.882601111969,410.610180235456,479.073284413471,423.337864988491,467.307542225917,439.664904988662,420.144458171253,391.010711913075,131.927727842429,81.8107876973855,127.910992742099,226.308267303125,138.78698288334,244.870224805241,262.734497457099,259.453182862662,310.621710354699,372.545505594034,229.507711774111,172.971061717891,188.06537552335,282.337172182988,225.57102938106,300.492905597846,240.400348430238,293.820373670165,285.316979252519,343.848850100521,334.277951567602,409.103601335229,380.249193961439,439.037050368385,214.651160073232,163.706240600457,213.389530317551,203.17390047867,187.51271676684,100.120189118398,203.646369187933,62.2579476575004,401.75340032031,147.466660192528,160.675038228465,98.8892387172687,105.663281522136,42.7483488539508,49.7969734093215,231.856032562713,169.583186579336,50.6700979507184,138.078855857991,327.672723819941,83.1378067919111,183.163210361359,329.251854608361,565.781009956828,182.432752829074,226.461785964646,189.793349354169,174.401541166099,296.959034510205,245.612748219648,31.018647875047,42.6733251544516,33.934345660203,82.0347447418485,135.475539994107,121.074929097611,111.062405526648,128.143839747554,75.1712828022038,32.7506204579391,82.524105587461,86.4652474767796,67.3163453218518,63.3131302783392,25.9388951739042,27.2024979430813,22.1660714215161,55.943276274263,65.2541396478751,259.746435591038,117.656945252306,193.131784660667,47.9572921127165,115.338573066557,52.4766806383299,189.48668888076,320.499979313116,192.425554142727,226.869121994535,233.272661003007,189.979952411879,218.151003816814,216.256975352467,231.593790026663,211.195904522018,186.114733986023,314.38711614676,223.628947178032,245.954344295057,82.0112944622525,136.350884557755,121.540693627588,149.091355363805,393.780058887866,321.019113383014,335.716567660039,65.5139012572181,92.2964294393607,56.4577314198067,145.416467004886,120.529405262167,144.211545443251,103.77569794939,118.570901727691,42.8501866282686,110.766074088739,64.4887469288173,115.716021599328,101.027388651492,97.3116350273967,120.550240668375,100.356841009285,126.935857529288,143.389611895585,278.73693976622,163.549311284596,224.351575357697,105.534907618186,127.785622126411,67.1488939146251,65.2687601579637,69.9623694093343,230.639881209461,136.796996371825,67.1162800118181,218.855953660861,154.599967904926,35.5806673272038,212.564353032731,306.527328641865,128.071796843612,130.675484666713,138.326800467942,91.4002037404007,53.194449337209,70.8749606101697,282.674518411359,117.611323273781,172.59834171349,189.749563210572,279.883109194067,200.242758801753,65.4458114693671,85.9765779441716,228.66639263988,195.113510404661,236.072844142824,105.28946527964,96.0182176608954,189.518478488279,67.29182316816,68.2469416537148,107.122299572099,73.5659023729653,285.717807649126,88.5369216408649,148.585081831424,158.156032233458,149.433656724728,156.302840645421,292.885055615548,73.9563611522652,50.395260261283,75.071720333164,68.7697182986169,64.8086927325529,705.068176122402,520.7687154175,32.8047605953333,72.4538925214415,161.709311377955,70.7612393941124,123.552393727706,119.046793317009,107.856340893528,74.3283139428302,95.3412437326222,165.274549475587,222.629836719022,321.490394726872,364.79808124221,96.9814551656148,253.33751903246,275.176655183456,118.411135638531,115.922816839363,83.4793400146994,63.2193656607982,65.4551378626315,194.01247416083,95.1500280127507,205.886131430515,135.195702385713,179.365510965336,260.487161451274,204.923262278168,228.36112196418,162.138679473626,121.859987954762,112.30907252217,120.700157244804,102.952006042879,175.900587800262,44.3034089983493,28.9202247817653,48.9496539062414,91.7454713104114,82.0874981372707,62.7794633737387,100.856154868512,121.230995723243,188.65150222181,97.9146094059238,184.918934282763,81.0219387045905,85.358485851776,253.136145696138,273.6782858311,234.682879415605,325.583766067878,248.549086931544,219.783371734344,176.206852665631,197.0538936635,226.005689647363,297.188851479164,403.817304759986,341.850365244339,398.249484387605,257.11784886133,337.087294059537,477.918476619548,333.722149582822,445.542098237491,540.731204428995,423.707375941964,308.590530383069,306.726315279684,569.675216727719,287.219935028144,395.591852370577,393.660152367359,282.654172032178,169.31283092802,239.316815974417,130.497145982606,355.021479352219,375.066408404611,187.713052356461,192.69959300368,238.703518655432,106.572048095252,303.375263589078,216.642464978237,170.125037737644,252.397895809128,266.672223816485,253.419203451937,50.1878123230783,674.021808275445,657.01663534958,645.10191494505,225.067966157485,114.038629661726,218.074111306103,401.774678272554,270.143459585565,338.402435033503,120.880898109736,180.792043147308,210.378779610044,206.529650330947,35.2988464798079,90.0337175162293,60.2328557308083,42.4825492566934,67.553546921702,34.2245621363709,69.5279637493002,95.5282809734247,369.839059809926,199.44135310817,132.894744215388,168.931777027838,372.088254984138,45.8596667188721,36.8411098446521,57.1489215424602,40.8181564839102,66.0427844100901,22.1303207885497,29.8729944418925,94.2278173710419,161.845587808191,146.400426674546,156.097737341949,119.5690644656,281.841368550236,93.8889499441737,211.249027887484,116.350377956301,150.673686321529,62.5211208986474,86.6911158733508,127.250779905345,222.67126584287,35.929995016986,32.0242020431677,40.9239857072344,34.1177058843219,56.8853801378948,99.23465580115,100.730869213027,155.118437525185,160.597371542971,68.5698349924207,74.9912700547977,66.1592508617928,53.9559393502575,127.376603553549,231.274613024449,279.01099135468,48.9382077433188,24.9936539538826,95.1460419115944,138.816789561302,115.070874118854,44.6208275361445,139.855809493581,138.800125517443,211.824966985468,128.992955729504,56.1805637228519,36.975185145458,375.459803939045,91.9710260480645,164.350829769702,108.995702349757,103.455397118934,88.4812367122038,71.4177415641661,231.930721431908,275.324510776839,107.540310748496,127.84163264758,176.197227057334,240.795812622313,367.33323802395,105.02074996831,220.671444217908,42.7303032544011,68.2707665594043,61.4701648609246,119.970615285607,83.0485095290475,66.2506081287356,27.827301241951,486.57172142384,65.6344884970212,64.4611342029696,179.352743442863,148.183382021683,152.382804021133,126.496534025015,81.3084087500609,67.3338042204262,98.9164513089196,57.4811789513424,374.009579427885,308.549202727859,198.143547630776,318.412522776824,115.167290400649,92.4584563895112,83.3707799900458,121.235840448922,109.636298733685,83.4236373941447,95.4517951268767,22.8451407041473,30.108197633486,148.127515344312,232.49688635422,160.837118763734,203.334484198181,88.8211630838956,121.612581595593,114.788841916362,162.978149927687,118.644527937909,99.1545965980977,63.1782999016785,76.4607065022036,47.1616869074874,48.0918274886092,80.8846027640021,130.072728959598,68.3244918300935,236.976710188306,238.677276467574,100.918676322552,80.7682438549913,83.878633417661,171.996230838599,102.669990325584,266.17531351365,208.998506514259,91.1489376936077,139.850815473654,143.44155285965,183.418668172593,135.54622997884,122.013290049796,112.706611536603,139.565389162298,111.847138063166,206.708186017984,333.391231995362 | |||
|short_description=p1@ACTR3 | |||
}} |
Revision as of 05:06, 21 January 2014
Short description: | p1@ACTR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ACTR3_5end |
Coexpression cluster: | C1246_Neutrophils_Eosinophils_CD14_migratory_Macrophage_Dendritic_Mast |
Association with transcript: | 0bp_to_ENST00000415792, ENST00000443297, ENST00000446821, ENST00000536059, ENST00000544784_5end |
EntrezGene: | ACTR3 |
HGNC: | 170 |
UniProt: | F8WEW2F8WDR7F8WE84F5H3P5B4DTI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 4.64e-44 | 427 |
somatic stem cell | 5.00e-43 | 433 |
stem cell | 1.20e-40 | 441 |
mesenchymal cell | 4.24e-37 | 354 |
hematopoietic oligopotent progenitor cell | 1.26e-36 | 161 |
hematopoietic multipotent progenitor cell | 1.26e-36 | 161 |
hematopoietic stem cell | 1.34e-35 | 168 |
leukocyte | 4.21e-35 | 136 |
connective tissue cell | 6.88e-35 | 361 |
hematopoietic cell | 6.20e-34 | 177 |
myeloid cell | 7.85e-34 | 108 |
common myeloid progenitor | 7.85e-34 | 108 |
myeloid leukocyte | 9.28e-33 | 72 |
macrophage dendritic cell progenitor | 1.58e-32 | 61 |
hematopoietic lineage restricted progenitor cell | 6.30e-32 | 120 |
monopoietic cell | 2.60e-31 | 59 |
monocyte | 2.60e-31 | 59 |
monoblast | 2.60e-31 | 59 |
promonocyte | 2.60e-31 | 59 |
granulocyte monocyte progenitor cell | 3.20e-31 | 67 |
nongranular leukocyte | 1.28e-30 | 115 |
myeloid lineage restricted progenitor cell | 1.51e-30 | 66 |
motile cell | 1.59e-30 | 386 |
defensive cell | 6.19e-29 | 48 |
phagocyte | 6.19e-29 | 48 |
classical monocyte | 2.71e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.71e-25 | 42 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.61e-34 | 371 |
hematopoietic system | 1.82e-32 | 98 |
blood island | 1.82e-32 | 98 |
hemolymphoid system | 7.94e-31 | 108 |
bone marrow | 2.27e-27 | 76 |
immune system | 1.07e-25 | 93 |
bone element | 1.24e-24 | 82 |
skeletal element | 9.80e-24 | 90 |
skeletal system | 6.56e-22 | 100 |
musculoskeletal system | 2.33e-21 | 167 |
lateral plate mesoderm | 9.66e-21 | 203 |
mesoderm | 3.56e-16 | 315 |
mesoderm-derived structure | 3.56e-16 | 315 |
presumptive mesoderm | 3.56e-16 | 315 |