FFCP PHASE1:Hg19::chr2:171034626..171034640,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=140469 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15576 | |||
|TSSclassifier=weak | |||
|UniProt=Q8WXR4,B7ZM71 | |||
|association_with_transcript=-14bp_to_ENST00000317915,ENST00000317935,ENST00000408978,ENST00000409044,ENST00000409940,ENST00000438642,NM_001083615,NM_001171642,NM_138995,uc002ufv.2,uc002ufw.2,uc002ufx.2,uc002ufy.2,uc002ufz.2,uc010fqb.1_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_3_at_MYO3B_5end | |||
|id=chr2:171034626..171034640,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.98e-08!24;CL:0000826!1.98e-08!24 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.50e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;3.42e-11;4!DOID:1325;6.04e-07;7!DOID:3904;6.04e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,3.42e-11,4;DOID:1325,6.04e-07,7;DOID:3904,6.04e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001905!1.90e-26!2;UBERON:0002757!1.90e-26!2;UBERON:0010134!1.90e-26!2;UBERON:0002784!1.90e-26!2;UBERON:0005408!1.90e-26!2;UBERON:0001899!1.90e-26!2;UBERON:0003296!9.75e-14!4;UBERON:0010133!9.75e-14!4;UBERON:0001882!1.83e-13!1;UBERON:0005403!1.83e-13!1;UBERON:0000966!4.12e-11!5;UBERON:0005388!4.12e-11!5;UBERON:0001802!4.12e-11!5;UBERON:0003075!2.27e-08!86;UBERON:0007284!2.27e-08!86;UBERON:0005743!2.89e-08!86;UBERON:0001894!3.10e-08!7;UBERON:0006222!3.10e-08!7;UBERON:0000955!5.19e-08!69;UBERON:0006238!5.19e-08!69;UBERON:0002346!5.78e-08!90;UBERON:0000073!2.03e-07!94;UBERON:0001016!2.03e-07!94;UBERON:0001049!2.19e-07!57;UBERON:0005068!2.19e-07!57;UBERON:0006241!2.19e-07!57;UBERON:0007135!2.19e-07!57;UBERON:0002616!3.97e-07!59;UBERON:0002298!4.55e-07!8;UBERON:0003056!5.86e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;3.49e-79;2!UBERON:0002757;3.49e-79;2!UBERON:0010134;3.49e-79;2!UBERON:0005408;3.49e-79;2!UBERON:0001899;3.49e-79;2!UBERON:0003296;2.71e-40;4!UBERON:0010133;2.71e-40;4!UBERON:0002784;2.71e-40;4!UBERON:0001894;1.44e-23;7!UBERON:0000966;2.86e-09;5!UBERON:0005388;2.86e-09;5!UBERON:0001802;2.86e-09;5!UBERON:0000970;5.70e-09;20!UBERON:0002104;1.37e-08;21!UBERON:0000020;6.29e-08;23!UBERON:0001032;1.23e-07;24!UBERON:0004456;1.23e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.49e-79,2;UBERON:0002757,3.49e-79,2;UBERON:0010134,3.49e-79,2;UBERON:0005408,3.49e-79,2;UBERON:0001899,3.49e-79,2;UBERON:0003296,2.71e-40,4;UBERON:0010133,2.71e-40,4;UBERON:0002784,2.71e-40,4;UBERON:0001894,1.44e-23,7;UBERON:0006222,1.44e-23,7;UBERON:0000970,1.37e-08,21;UBERON:0002104,1.37e-08,21;UBERON:0000966,6.34e-08,6;UBERON:0005388,6.34e-08,6;UBERON:0001802,6.34e-08,6;UBERON:0000020,1.23e-07,24;UBERON:0001032,1.23e-07,24;UBERON:0004456,1.23e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97157629717171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67850917939143,13.1150651665341,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,4.28859265059938,0.47404083519818,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95785860283545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@MYO3B | |||
}} |
Revision as of 06:32, 21 January 2014
Short description: | p3@MYO3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MYO3B_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -14bp_to_ENST00000317915, ENST00000317935, ENST00000408978, ENST00000409044, ENST00000409940, ENST00000438642, NM_001083615, NM_001171642, NM_138995, uc002ufv.2, uc002ufw.2, uc002ufx.2, uc002ufy.2, uc002ufz.2, uc010fqb.1_5end |
EntrezGene: | MYO3B |
HGNC: | 15576 |
UniProt: | Q8WXR4B7ZM71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 3.49e-79 | 2 |
regional part of epithalamus | 3.49e-79 | 2 |
secretory circumventricular organ | 3.49e-79 | 2 |
circumventricular organ | 3.49e-79 | 2 |
epithalamus | 3.49e-79 | 2 |
gland of diencephalon | 2.71e-40 | 4 |
neuroendocrine gland | 2.71e-40 | 4 |
regional part of diencephalon | 2.71e-40 | 4 |
diencephalon | 1.44e-23 | 7 |
future diencephalon | 1.44e-23 | 7 |
eye | 1.37e-08 | 21 |
visual system | 1.37e-08 | 21 |
retina | 6.34e-08 | 6 |
photoreceptor array | 6.34e-08 | 6 |
posterior segment of eyeball | 6.34e-08 | 6 |
sense organ | 1.23e-07 | 24 |
sensory system | 1.23e-07 | 24 |
entire sense organ system | 1.23e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 3.42e-11 | 4 |
bronchus cancer | 6.04e-07 | 7 |
bronchogenic carcinoma | 6.04e-07 | 7 |