FFCP PHASE1:Hg19::chr2:201936507..201936540,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4709 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7698 | |||
|TSSclassifier=strong | |||
|UniProt=O43676,Q6IB80 | |||
|association_with_transcript=45bp_to_ENST00000237889,NM_002491,uc002uwx.3_5end | |||
|description=CAGE_peak_2_at_NDUFB3_5end | |||
|id=chr2:201936507..201936540,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.22e-15!119;CL:0000115!4.85e-09!35;CL:0000393!5.11e-09!60;CL:0000211!5.11e-09!60;CL:0002139!8.19e-09!24;CL:0000680!1.21e-08!57;CL:0000056!1.21e-08!57;CL:0000355!1.21e-08!57;CL:0000187!1.97e-08!54;CL:0000213!6.57e-08!57;CL:0000215!6.57e-08!57;CL:0002078!9.80e-08!44;CL:0000192!1.14e-07!42;CL:0000514!1.14e-07!42;CL:0000183!2.41e-07!59;CL:0000359!3.59e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.45e-09;24!CL:0000115;9.05e-09;36!CL:0000359;8.68e-08;32!CL:0000071;2.77e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.17e-15,121;CL:0000115,5.63e-10,36;CL:0002139,1.93e-09,24;CL:0000393,4.54e-09,61;CL:0000211,4.54e-09,61;CL:0000680,1.91e-08,58;CL:0000056,1.91e-08,58;CL:0000355,1.91e-08,58;CL:0000187,2.00e-08,55;CL:0000213,3.21e-08,58;CL:0000215,3.21e-08,58;CL:0002078,5.92e-08,45;CL:0000192,1.39e-07,43;CL:0000514,1.39e-07,43;CL:0000359,2.39e-07,32;CL:0000071,3.68e-07,18;CL:0002546,3.68e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;2.77e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!2.83e-20!113;UBERON:0004535!1.06e-19!110;UBERON:0002049!1.02e-14!79;UBERON:0007798!1.02e-14!79;UBERON:0000055!2.45e-14!69;UBERON:0001981!1.69e-12!60;UBERON:0007500!1.69e-12!60;UBERON:0004537!1.69e-12!60;UBERON:0006965!1.69e-12!60;UBERON:0004872!1.90e-12!84;UBERON:0003081!2.88e-11!216;UBERON:0000490!4.12e-10!138;UBERON:0000926!3.81e-09!448;UBERON:0004120!3.81e-09!448;UBERON:0006603!3.81e-09!448;UBERON:0003914!3.94e-09!118;UBERON:0001134!1.14e-08!61;UBERON:0002036!1.14e-08!61;UBERON:0003082!1.14e-08!61;UBERON:0004290!1.76e-08!70;UBERON:0002385!2.41e-08!63;UBERON:0001015!2.41e-08!63;UBERON:0000383!2.41e-08!63;UBERON:0001637!2.55e-08!42;UBERON:0003509!2.55e-08!42;UBERON:0004572!2.55e-08!42;UBERON:0000486!4.38e-08!82;UBERON:0002204!1.32e-07!167;UBERON:0000914!2.60e-07!83;UBERON:0002329!2.60e-07!83;UBERON:0003077!2.60e-07!83;UBERON:0003059!2.60e-07!83;UBERON:0007282!2.60e-07!83;UBERON:0009618!2.60e-07!83;UBERON:0007285!2.60e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;6.90e-08;56!UBERON:0001981;6.90e-08;56!UBERON:0004537;6.90e-08;56!UBERON:0000055;7.60e-08;65!UBERON:0004638;2.77e-07;18!UBERON:0001986;2.77e-07;18!UBERON:0004852;2.77e-07;18!UBERON:0001637;6.27e-07;42!UBERON:0003509;6.27e-07;42!UBERON:0004572;6.27e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,4.64e-21,112;UBERON:0004535,1.22e-20,109;UBERON:0000926,7.43e-16,315;UBERON:0004120,7.43e-16,315;UBERON:0006603,7.43e-16,315;UBERON:0002049,3.32e-15,78;UBERON:0007798,3.32e-15,78;UBERON:0000055,8.01e-15,68;UBERON:0003081,1.35e-14,203;UBERON:0004872,2.91e-13,83;UBERON:0007500,6.76e-13,59;UBERON:0001981,6.76e-13,59;UBERON:0004537,6.76e-13,59;UBERON:0006965,6.76e-13,59;UBERON:0000490,2.21e-10,148;UBERON:0003914,1.96e-09,117;UBERON:0001134,1.05e-08,62;UBERON:0002036,1.05e-08,62;UBERON:0003082,1.05e-08,62;UBERON:0007503,1.06e-08,78;UBERON:0002329,1.09e-08,71;UBERON:0003059,1.09e-08,71;UBERON:0007282,1.09e-08,71;UBERON:0004290,1.09e-08,71;UBERON:0009618,1.09e-08,71;UBERON:0001637,1.30e-08,42;UBERON:0003509,1.30e-08,42;UBERON:0004572,1.30e-08,42;UBERON:0002385,2.21e-08,64;UBERON:0001015,2.21e-08,64;UBERON:0000383,2.21e-08,64;UBERON:0003077,2.74e-08,72;UBERON:0007285,2.74e-08,72;UBERON:0000486,5.07e-08,83;UBERON:0007524,6.59e-08,73;UBERON:0004638,3.68e-07,18;UBERON:0001986,3.68e-07,18;UBERON:0004852,3.68e-07,18;UBERON:0002204,6.06e-07,167;UBERON:0000487,9.47e-07,22 | |||
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| |||
|short_description=p2@NDUFB3 | |||
}} |
Revision as of 07:52, 21 January 2014
Short description: | p2@NDUFB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NDUFB3_5end |
Coexpression cluster: | NA |
Association with transcript: | 45bp_to_ENST00000237889, NM_002491, uc002uwx.3_5end |
EntrezGene: | NDUFB3 |
HGNC: | 7698 |
UniProt: | O43676Q6IB80 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.17e-15 | 121 |
endothelial cell | 5.63e-10 | 36 |
endothelial cell of vascular tree | 1.93e-09 | 24 |
electrically responsive cell | 4.54e-09 | 61 |
electrically active cell | 4.54e-09 | 61 |
muscle precursor cell | 1.91e-08 | 58 |
myoblast | 1.91e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.91e-08 | 58 |
muscle cell | 2.00e-08 | 55 |
lining cell | 3.21e-08 | 58 |
barrier cell | 3.21e-08 | 58 |
meso-epithelial cell | 5.92e-08 | 45 |
smooth muscle cell | 1.39e-07 | 43 |
smooth muscle myoblast | 1.39e-07 | 43 |
vascular associated smooth muscle cell | 2.39e-07 | 32 |
blood vessel endothelial cell | 3.68e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.68e-07 | 18 |