FFCP PHASE1:Hg19::chr22:18260469..18260510,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200298 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26875 | |||
|TSSclassifier=not | |||
|UniProt=Q8N1L1 | |||
|association_with_transcript=381bp_to_AK097861_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_LINC00528_5end | |||
|id=chr22:18260469..18260510,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.33e-105!42;CL:0000860!1.61e-97!45;CL:0000766!5.23e-91!76;CL:0000738!1.29e-80!140;CL:0000557!9.33e-72!71;CL:0000839!1.27e-69!70;CL:0002009!4.66e-69!65;CL:0002194!3.75e-68!63;CL:0000576!3.75e-68!63;CL:0000040!3.75e-68!63;CL:0000559!3.75e-68!63;CL:0000037!1.09e-64!172;CL:0000566!1.09e-64!172;CL:0000763!1.21e-64!112;CL:0000049!1.21e-64!112;CL:0002032!2.54e-61!165;CL:0000837!2.54e-61!165;CL:0002087!8.36e-61!119;CL:0000988!2.97e-60!182;CL:0002031!7.48e-60!124;CL:0000134!1.40e-22!358;CL:0002393!2.27e-22!9;CL:0002397!2.27e-22!9;CL:0002320!7.87e-22!365;CL:0000094!2.38e-21!8;CL:0000219!3.48e-19!390;CL:0000034!1.22e-16!444;CL:0000048!5.08e-16!430;CL:0000723!1.43e-15!436;CL:0000081!4.29e-15!11;CL:0000775!3.85e-09!3;CL:0000842!8.61e-09!3;CL:0000767!9.32e-09!3;CL:0000063!3.29e-08!578;CL:0000875!5.78e-08!3;CL:0000623!5.78e-08!3;CL:0002396!5.78e-08!3;CL:0000825!5.78e-08!3;CL:0000144!2.27e-07!625;CL:0002371!4.82e-07!591;CL:0000771!7.68e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.97e-76;33!CL:0002057;1.97e-76;33!CL:0000473;1.58e-52;39!CL:0000234;1.58e-52;39!CL:0000576;1.40e-49;48!CL:0000766;4.58e-39;69!CL:0000094;3.25e-35;8!CL:0000081;2.78e-25;11!CL:0002393;7.02e-19;6!CL:0002397;7.02e-19;6!CL:0000763;5.14e-18;100!CL:0002087;1.78e-15;104!CL:0000775;1.84e-14;3!CL:0000226;6.91e-14;3!CL:0000842;6.91e-14;3!CL:0000767;1.08e-13;3!CL:0000738;8.08e-12;136!CL:0000771;1.38e-10;2!CL:0000988;1.55e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.25e-93,42;CL:0002057,1.25e-93,42;CL:0000766,2.97e-89,72;CL:0000473,4.40e-81,48;CL:0000234,4.40e-81,48;CL:0002194,1.65e-63,59;CL:0000576,1.65e-63,59;CL:0000040,1.65e-63,59;CL:0000559,1.65e-63,59;CL:0002009,3.05e-61,61;CL:0000839,3.87e-60,66;CL:0000557,3.76e-59,67;CL:0000763,3.24e-57,108;CL:0000049,3.24e-57,108;CL:0000738,7.74e-52,136;CL:0000037,1.65e-40,168;CL:0000988,4.69e-38,177;CL:0002087,1.52e-36,115;CL:0002032,6.30e-36,161;CL:0000837,6.30e-36,161;CL:0000094,2.06e-35,8;CL:0002031,3.47e-30,120;CL:0000081,2.01e-25,11;CL:0000134,5.35e-15,354;CL:0002320,1.51e-14,361;CL:0000775,1.68e-14,3;CL:0000226,6.61e-14,3;CL:0000842,6.61e-14,3;CL:0000767,7.57e-14,3;CL:0000219,5.88e-13,386;CL:0002393,1.72e-12,9;CL:0002397,1.72e-12,9;CL:0000034,4.10e-12,441;CL:0000048,5.22e-11,427;CL:0000723,9.69e-11,433;CL:0000771,1.38e-10,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.07e-69;42!CL:0000049;5.81e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.55e-62!80;UBERON:0002390!4.81e-58!102;UBERON:0003061!4.81e-58!102;UBERON:0001474!4.07e-57!86;UBERON:0002193!1.15e-51!112;UBERON:0004765!8.56e-47!101;UBERON:0001434!8.56e-47!101;UBERON:0002405!2.47e-43!115;UBERON:0002204!2.23e-23!167;UBERON:0002384!8.32e-21!375;UBERON:0003081!2.58e-20!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.00e-51,76;UBERON:0001474,3.33e-47,82;UBERON:0002390,5.23e-47,98;UBERON:0003061,5.23e-47,98;UBERON:0004765,1.93e-42,90;UBERON:0002193,5.10e-42,108;UBERON:0002405,7.30e-41,93;UBERON:0001434,1.51e-37,100;UBERON:0002204,8.70e-20,167;UBERON:0003081,5.36e-19,203;UBERON:0002384,6.24e-14,371;UBERON:0000926,1.22e-09,315;UBERON:0004120,1.22e-09,315;UBERON:0006603,1.22e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.157421562627358,1.96682138424452,2.68680578668049,1.85779347979291,0,0,0,0,0,0,11.6339035791694,7.2196001089251,7.37836960433896,0,0,0,0.290796477559129,0.377875943688809,0.242584061187816,3.0215774797739,4.11167888021826,5.57471467611186,10.6446185159196,7.68482119587302,10.1687358852092,22.0637235671436,15.4916324060118,12.1883837934908,1.69418105588344,1.09162460023138,2.02251136000576,22.6502080354468,21.5022448140983,29.4095077867559,0.329851300186716,0.398927315243264,0.426224750532694,14.2202526928006,13.0498601678962,11.2108004819203,4.01997864410789,5.73631210262222,6.29847649644838,10.2917915447673,19.5187147073409,19.6206680213348,0.845021145247767,1.70083439972035,1.04829322754188,1.01095768031846,0.450530678524519,0.32145117339416,0.570025487482497,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22462922052443,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86595303986695,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0.385029108839245,0,0,0,0,0,3.74503511973591,5.9832291840805,8.28831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,3.23571301227925,2.77491650288955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@LINC00528 | |||
}} |
Revision as of 14:31, 21 January 2014
Short description: | p4@LINC00528 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LINC00528_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 381bp_to_AK097861_5end |
EntrezGene: | LINC00528 |
HGNC: | 26875 |
UniProt: | Q8N1L1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.00e-51 | 76 |
bone element | 3.33e-47 | 82 |
hematopoietic system | 5.23e-47 | 98 |
blood island | 5.23e-47 | 98 |
skeletal element | 1.93e-42 | 90 |
hemolymphoid system | 5.10e-42 | 108 |
immune system | 7.30e-41 | 93 |
skeletal system | 1.51e-37 | 100 |
musculoskeletal system | 8.70e-20 | 167 |
lateral plate mesoderm | 5.36e-19 | 203 |
connective tissue | 6.24e-14 | 371 |
mesoderm | 1.22e-09 | 315 |
mesoderm-derived structure | 1.22e-09 | 315 |
presumptive mesoderm | 1.22e-09 | 315 |