FFCP PHASE1:Hg19::chr3:46395579..46395623,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=729230 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1603 | |||
|TSSclassifier=strong | |||
|UniProt=E9PH76 | |||
|association_with_transcript=0bp_to_ENST00000421659_5end | |||
|description=CAGE_peak_1_at_CCR2_5end | |||
|id=chr3:46395579..46395623,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.89e-49!172;CL:0000566!3.89e-49!172;CL:0000738!1.50e-47!140;CL:0002032!1.92e-44!165;CL:0000837!1.92e-44!165;CL:0000988!3.62e-44!182;CL:0002087!1.83e-42!119;CL:0002031!1.60e-39!124;CL:0002057!9.93e-32!42;CL:0000763!2.75e-31!112;CL:0000049!2.75e-31!112;CL:0000766!8.45e-31!76;CL:0002009!4.16e-30!65;CL:0002194!3.80e-29!63;CL:0000576!3.80e-29!63;CL:0000040!3.80e-29!63;CL:0000559!3.80e-29!63;CL:0000860!1.61e-28!45;CL:0000557!2.64e-28!71;CL:0000839!1.16e-27!70;CL:0000791!1.61e-12!18;CL:0000789!1.61e-12!18;CL:0002420!1.61e-12!18;CL:0002419!1.61e-12!18;CL:0000790!1.61e-12!18;CL:0000542!1.45e-11!53;CL:0000051!1.45e-11!53;CL:0000838!4.12e-11!52;CL:0000625!2.16e-10!11;CL:0000084!2.34e-08!25;CL:0000827!2.34e-08!25;CL:0000134!2.62e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.25e-32;33!CL:0002057;5.25e-32;33!CL:0000576;2.25e-28;48!CL:0000473;8.83e-22;39!CL:0000234;8.83e-22;39!CL:0000766;5.28e-15;69!CL:0002087;4.48e-13;104!CL:0000763;5.07e-12;100!CL:0000625;5.29e-11;11!CL:0002393;7.84e-09;6!CL:0002397;7.84e-09;6!CL:0000738;8.13e-09;136!CL:0000791;8.96e-09;18!CL:0000789;8.96e-09;18!CL:0002419;8.96e-09;18!CL:0000988;2.73e-07;177!CL:0000236;3.89e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.53e-44,168;CL:0000738,5.97e-41,136;CL:0000988,1.24e-40,177;CL:0002087,1.81e-40,115;CL:0000860,4.26e-39,42;CL:0002057,4.26e-39,42;CL:0002032,2.77e-38,161;CL:0000837,2.77e-38,161;CL:0002194,9.87e-37,59;CL:0000576,9.87e-37,59;CL:0000040,9.87e-37,59;CL:0000559,9.87e-37,59;CL:0000766,5.83e-36,72;CL:0002009,4.46e-35,61;CL:0002031,1.07e-34,120;CL:0000763,5.82e-33,108;CL:0000049,5.82e-33,108;CL:0000839,6.85e-33,66;CL:0000473,1.16e-32,48;CL:0000234,1.16e-32,48;CL:0000557,2.25e-32,67;CL:0000625,5.19e-11,11;CL:0000134,3.74e-09,354;CL:0000791,8.73e-09,18;CL:0000789,8.73e-09,18;CL:0002420,8.73e-09,18;CL:0002419,8.73e-09,18;CL:0000790,8.73e-09,18;CL:0002320,1.39e-08,361 | |||
|ontology_enrichment_development_v019=CL:0002057;4.39e-28;42!CL:0000049;1.04e-09;108!CL:0000790;8.96e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.92e-35!102;UBERON:0003061!6.92e-35!102;UBERON:0002193!7.46e-32!112;UBERON:0002371!3.78e-24!80;UBERON:0001474!4.33e-21!86;UBERON:0007023!9.33e-21!115;UBERON:0002405!3.79e-18!115;UBERON:0004765!3.49e-15!101;UBERON:0001434!3.49e-15!101;UBERON:0003081!7.47e-11!216;UBERON:0000178!1.06e-09!15;UBERON:0000179!1.06e-09!15;UBERON:0000463!1.06e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.62e-14;15!UBERON:0000179;2.62e-14;15!UBERON:0000463;2.62e-14;15!UBERON:0002390;8.77e-11;32!UBERON:0002193;4.14e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.20e-44,98;UBERON:0003061,1.20e-44,98;UBERON:0002193,6.78e-42,108;UBERON:0002405,1.02e-29,93;UBERON:0002371,1.93e-28,76;UBERON:0001474,2.48e-25,82;UBERON:0004765,7.53e-22,90;UBERON:0001434,2.59e-18,100;UBERON:0003081,1.44e-14,203;UBERON:0000178,2.76e-14,15;UBERON:0000179,2.76e-14,15;UBERON:0000463,2.76e-14,15;UBERON:0002384,8.15e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.521299627654,2.68680578668049,8.97933515233241,0,0,0,0,0,5.5784083473621,3.87796785972314,3.20871115952227,4.99125002646459,0.447830948479849,1.29557466407592,1.03030227053675,59.1770831832828,12.4699061417307,33.2340163827308,9.99444858694444,2.05583944010913,1.54853185447552,4.60307827715441,0.512321413058201,3.31075121844019,7.58440497620561,4.51839278508678,1.35426486594342,10.3533286748433,2.45615535052061,4.71919317334678,5.20342617030534,2.88836124368484,1.27867425159808,19.1313754108295,7.77908264724364,10.6556187633174,2.32167390902867,0.56738522469114,2.4912889959823,5.27622197039161,1.0429658368404,1.73751075764093,6.65939452896706,1.47311054395026,2.21523671208619,8.23895616616573,5.52771179909113,12.3698600849942,96.6026227859858,75.0884464207532,53.8430715435218,0,0.19891667719909,0.182664153764634,7.03984977845291,3.82297027883492,1.77901850772711,12.8019066769952,1.20118796110804,4.59801951963587,5.2883589822789,1.90810750907073,0,1.17447437874188,0.382273228125229,1.32171328579026,0,16.5931973408299,0.590129310341499,0.786021525498329,0.822405995998037,17.5545820160212,0.32592226663359,0,0,31.7519802122745,2.65145316727353,6.20294904834139,8.12411591295047,17.8046934418688,24.9713947314966,38.4784696772602,42.005202703449,39.4132196599671,0,0.535081656179426,0,40.1115073149384,8.04763036564035,10.6524508099615,17.4583587493457,18.4767940307976,15.626002892554,20.9099449778642,18.6713147656438,16.3822862277656,43.7257542933211,26.7558294809739,23.8127119107104,1.41124720257313,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.5062593682237,0,0,0,0.174129737299267,2.12732736830184,77.0324716506255,50.9075470594314,50.8896776821504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.594524649154913,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,0.215627574859517,0.385029108839245,0,0,0,0,0,0.749007023947182,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3722414367588,6.03999762292127,6.08347079479633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09629938322967,0.522870902049801,0,0,0,1.54561517471583,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,1.88287601553558,0,0,0,0,40.5958087385735,30.585488285695,34.1788312304498,38.8317793996196,45.6612123125676,37.6114520491776,32.4018862342869,34.1043825806536,0,0,0,0.929015875628594,0,0,0.318852545457645,0,12.4478490586038,0,0,0,2.51058146936511,0,0,0,24.569975490866,43.1851373388842,8.51692475380653,6.52660155035953,44.8571515890349,77.8392855465607,53.5585744895226,1.9538809540204,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.996239941255349,1.65770349318689,0,0,0.615424027305347,0,0,0,24.043901400663,0.493217028184668,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,1.38510465306835,0,0,0,0,0.638002319463839,0,0.533034776018635,0,0,1.82832850090172,0,0,0,0,0.317873157960757,0,0,0,0,0,0.442287822516696,0,0,0,0,0.202203398942031,0,0.468528891450678,0,0,0,1.18375320854817,0,0,6.06591164433484,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0.775912131907355,0,0.677942222341597,0,0,0.126621591911757,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,2.55493176133945,0,0,0.558564802544508,0.458320848023367,0.717873024576814,0,0,0.223171457441873,0.739018197353989,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0.449947783103001,0.77380195455795,0,0,1.73372556058236,0.524545881349981,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0,0.13223260174269,0,0,2.24253566392159,2.04365596629566,2.89967338743037,15.8773126979824,1.18566979138767,0,0,0,0,0,0,0,0,0,0.1251909307065,1.72022758707021,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0,0,0,0,0,1.28030075632969,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601682626794058,0,0.781514011233092,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0.548257766857182,0.496211178389294,0,0,0,0,0.606965604236632,0,1.1531308121143,0.345701962667338,0,0.135939465953663,0.0657727735628491,0,0,2.04082041411336,0,0,0.913158720509496,0,0,1.07214816264985,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.540219106755613,0.874238242015829,0,0,0,0,1.18818560130834,0,0,6.95480993050916,3.6740996144939,0,0,0,0,0,2.2936464170227,0.573358332605805,0,0,0.436350690340377,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0.20686599172379,1.0661699095049,0.23806443146374,1.29177819672012,1.11734485732544,0,0.445530107947154,0,0.653150243690884,0.342233301085281,2.08791364345221,2.65372159952903,0,0,0,0,0,0,1.1001729976458,0,0.665756774185513,2.81783311027437,0.320568492303233 | |||
|short_description=p1@CCR2 | |||
}} |
Revision as of 18:37, 21 January 2014
Short description: | p1@CCR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCR2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000421659_5end |
EntrezGene: | CCR2 |
HGNC: | 1603 |
UniProt: | E9PH76 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.53e-44 | 168 |
leukocyte | 5.97e-41 | 136 |
hematopoietic cell | 1.24e-40 | 177 |
nongranular leukocyte | 1.81e-40 | 115 |
classical monocyte | 4.26e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.26e-39 | 42 |
hematopoietic oligopotent progenitor cell | 2.77e-38 | 161 |
hematopoietic multipotent progenitor cell | 2.77e-38 | 161 |
monopoietic cell | 9.87e-37 | 59 |
monocyte | 9.87e-37 | 59 |
monoblast | 9.87e-37 | 59 |
promonocyte | 9.87e-37 | 59 |
myeloid leukocyte | 5.83e-36 | 72 |
macrophage dendritic cell progenitor | 4.46e-35 | 61 |
hematopoietic lineage restricted progenitor cell | 1.07e-34 | 120 |
myeloid cell | 5.82e-33 | 108 |
common myeloid progenitor | 5.82e-33 | 108 |
myeloid lineage restricted progenitor cell | 6.85e-33 | 66 |
defensive cell | 1.16e-32 | 48 |
phagocyte | 1.16e-32 | 48 |
granulocyte monocyte progenitor cell | 2.25e-32 | 67 |
CD8-positive, alpha-beta T cell | 5.19e-11 | 11 |
mesenchymal cell | 3.74e-09 | 354 |
mature alpha-beta T cell | 8.73e-09 | 18 |
alpha-beta T cell | 8.73e-09 | 18 |
immature T cell | 8.73e-09 | 18 |
mature T cell | 8.73e-09 | 18 |
immature alpha-beta T cell | 8.73e-09 | 18 |
connective tissue cell | 1.39e-08 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.20e-44 | 98 |
blood island | 1.20e-44 | 98 |
hemolymphoid system | 6.78e-42 | 108 |
immune system | 1.02e-29 | 93 |
bone marrow | 1.93e-28 | 76 |
bone element | 2.48e-25 | 82 |
skeletal element | 7.53e-22 | 90 |
skeletal system | 2.59e-18 | 100 |
lateral plate mesoderm | 1.44e-14 | 203 |
blood | 2.76e-14 | 15 |
haemolymphatic fluid | 2.76e-14 | 15 |
organism substance | 2.76e-14 | 15 |
connective tissue | 8.15e-08 | 371 |