FFCP PHASE1:Hg19::chr3:125802998..125803003,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54946 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31046 | |||
|TSSclassifier=strong | |||
|UniProt=D6R9X6 | |||
|association_with_transcript=8bp_to_ENST00000514677_5end | |||
|description=CAGE_peak_6_at_SLC41A3_5end | |||
|id=chr3:125802998..125803003,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;1.84e-34;1!CL:0002625;1.84e-34;1!CL:0000216;1.84e-34;1!CL:0000650;9.07e-18;2!CL:1000500;9.07e-18;2!CL:1000618;9.07e-18;2!CL:1001318;9.07e-18;2!CL:0002545;9.07e-18;2!CL:0002173;9.07e-18;2!CL:0000346;2.59e-12;3!CL:1000428;2.59e-12;3!CL:0000669;1.44e-09;4!CL:0002559;6.55e-08;5!CL:0002537;6.55e-08;5!CL:0000154;7.17e-07;6!CL:0002544;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.84e-34,1;CL:0002625,1.84e-34,1;CL:0000216,1.84e-34,1;CL:0002545,6.48e-18,2;CL:0000650,1.07e-17,2;CL:1000500,1.07e-17,2;CL:1000618,1.07e-17,2;CL:1001318,1.07e-17,2;CL:0002173,1.07e-17,2;CL:0000346,2.31e-12,3;CL:1000428,2.31e-12,3;CL:0000669,1.57e-09,4;CL:0002559,6.13e-08,5;CL:0002537,7.49e-08,5;CL:0000154,7.17e-07,6;CL:0002544,7.58e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.63e-10!94;UBERON:0001016!2.63e-10!94;UBERON:0005743!3.65e-10!86;UBERON:0004121!5.69e-10!169;UBERON:0001017!6.35e-10!82;UBERON:0001049!1.12e-09!57;UBERON:0005068!1.12e-09!57;UBERON:0006241!1.12e-09!57;UBERON:0007135!1.12e-09!57;UBERON:0000924!3.35e-09!173;UBERON:0006601!3.35e-09!173;UBERON:0002020!9.86e-09!34;UBERON:0003528!9.86e-09!34;UBERON:0001893!1.04e-08!34;UBERON:0002616!1.60e-08!59;UBERON:0000955!3.21e-08!69;UBERON:0006238!3.21e-08!69;UBERON:0002791!4.81e-08!33;UBERON:0001869!6.02e-08!32;UBERON:0001950!8.69e-08!20;UBERON:0000033!9.65e-08!123;UBERON:0003075!9.96e-08!86;UBERON:0007284!9.96e-08!86;UBERON:0002619!2.36e-07!22;UBERON:0000153!2.54e-07!129;UBERON:0007811!2.54e-07!129;UBERON:0000956!3.61e-07!25;UBERON:0000203!3.61e-07!25;UBERON:0000119!5.67e-07!312;UBERON:0002346!8.57e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.84e-34;1!UBERON:0001343;1.84e-34;1!UBERON:0004910;1.84e-34;1!UBERON:0004813;1.84e-34;1!UBERON:0004909;5.48e-18;2!UBERON:0005800;9.07e-18;2!UBERON:0003567;9.07e-18;2!UBERON:0003838;9.07e-18;2!UBERON:0003586;9.07e-18;2!UBERON:0005169;9.07e-18;2!UBERON:0002321;9.07e-18;2!UBERON:0001515;9.07e-18;2!UBERON:0005215;9.07e-18;2!UBERON:0002303;9.07e-18;2!UBERON:0002319;9.07e-18;2!UBERON:0000988;2.59e-12;3!UBERON:0000412;2.59e-12;3!UBERON:0001992;2.59e-12;3!UBERON:0005904;1.12e-09;4!UBERON:0003891;1.44e-09;4!UBERON:0002073;6.55e-08;5!UBERON:0000487;5.09e-07;22!UBERON:0002298;8.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.84e-34,1;UBERON:0001343,1.84e-34,1;UBERON:0004910,1.84e-34,1;UBERON:0005154,1.84e-34,1;UBERON:0005295,1.84e-34,1;UBERON:0004813,1.84e-34,1;UBERON:0005297,1.84e-34,1;UBERON:0005294,1.84e-34,1;UBERON:0010141,1.84e-34,1;UBERON:0005891,1.84e-34,1;UBERON:0004909,5.48e-18,2;UBERON:0005800,6.48e-18,2;UBERON:0001515,6.48e-18,2;UBERON:0003567,1.07e-17,2;UBERON:0003838,1.07e-17,2;UBERON:0003586,1.07e-17,2;UBERON:0005169,1.07e-17,2;UBERON:0002321,1.07e-17,2;UBERON:0005215,1.07e-17,2;UBERON:0002303,1.07e-17,2;UBERON:0002319,1.07e-17,2;UBERON:0004871,1.71e-17,8;UBERON:0004876,4.80e-13,11;UBERON:0000412,2.31e-12,3;UBERON:0001992,2.31e-12,3;UBERON:0000988,2.59e-12,3;UBERON:0005904,1.12e-09,4;UBERON:0003891,1.57e-09,4;UBERON:0000058,5.73e-08,19;UBERON:0002073,6.13e-08,5;UBERON:0005086,6.13e-08,5;UBERON:0000487,4.79e-07,22;UBERON:0002298,8.48e-07,6 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0,0,0.893922188854576,0,0,0,0,0.491467873003018,0,0.218441372130172,0,0.123766352960047,0,0.672325146451775,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0.229240217243854,0,0.157421562627358,0,0,0.154816123316076,0,0,0,0.0774672005803016,0.142169232487422,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0.209658645508376,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0.144846518960824,0,0,0.189069634328136,0,0.263504357079378,0.261958150995425,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0.402829317109147,0,0,0,1.62028389576352,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0.302714855289863,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0,0,0.554128230968366,0.438977620880838,0,0.150238058906597,0.340296549480063,0.179389635688862,0,0,0,0,0,0.18611685633159,0.168776332241266,0,0,0,0.161646056818812,0.355009592516614,0.201504196455281,0,0,0.545492241181669,0,0,0,0.116193942869518,0,0,0,1.56449532329816,0.643240938192885,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0.858486162094873,0,0.234004265139238,0,0.93733833986777,0,0.283550194484773,0.358234090811393,0,0.383382679165211,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0.571652865261156,0.112131084345361,0.43596006883328,0,0.258543431515556,0,0,0.531876233169741,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.502548796003046,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.783204629850962,0.343143423810856,0.206768026122887,0,0.213455115606889,0,0,0.30239029332968,0,0.153461973288062,0.280660094433074,0.384417447767103,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0.120859449591622,0.200506470303285,0,0.229628896329213,0,0,0.902399225814824,0.231046011313244,0,0,0,0,0,0,0,1.08378575017541,0,0,0,0,0,0,0.256450125116389,0.656029291399411,0,0,0.27470839445503,0.330037999682352,0,0,3.21367859688319,0.193341436584244,0.154048617114644,0.15350367472613,0,0.107420244868274,0.145016693914229,0,0.0890320356467374,0,0.192190067365106,0.255225424989168,0,0,0,0,0.616067160352178,0.532306030317022,0,0,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0,0.636406495851874,0,0,0,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0.141405431953713,0,0.551365343546124,0,0,0,0,0.202910376962704,0,0,0,0.294747123039363,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0.245040215981032,0,0.144269212976445,0,0.159426272728822,0,0.191505370132367,0,0,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0.18714054040822,0,0.242721043499027,0.111443384277478,0,0.47748896947538,0,0,0,0.562677665642051,0.222617410045812,0,0,0,0,0,0.409074730008619,0,0,0.179736702294654,0,0,0.197286811273867,0,0,0,0.649376687132959,0,0,0.262379999988587,0,0,0.254253650292766,0,0,0.291604613383254,0,0,0.482385754501632,0,0.552896299656123,0.886642856860642,0.87754158861589,0.10893846351899,0.41827123283581,0,0.227884111694002,0.23056390438806,0.269272933229316,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0,0,0.19566461893209,0,0,0,0.30607276163049,0.126373159256976,0,0.103688191397247,0,0,0,0,0.284609546029793,0.138674673013139,0,0.195984794828755,0.0870592065804026,0,0.171986032471617,0.19351266257817,0,0.0821154570532092,0.0969890164884194,0,0.451961481561065,0,0,0.759729551470544,0.195551382734803,0.160317640503067,0,0,0.144090417154106,0,0,0,0.124252535565433,0,0,0.209205692624666,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0.223171457441873,0.268733889946905,0,0,0.0787831823072236,0.164831716762333,0,0.0984274815147488,0.0846733320657845,0,0.136203406111576,0,0.137539436597234,0.415440338029185,0,0,0.425246896606173,0,0,0.314727528809989,0.105600336519406,0.179287339332845,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.517131825446202,0.26446520348538,0,0,0.106787412567695,0,0,0,0.197611631897944,0.487170393523584,0.638341257770182,0,0,0,0,0,0.886068179966986,0.610131324509816,0.3755727921195,0,0.110929051536852,0.869349641179368,0,0,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0.147855149989634,0,0,0.310525913752519,0,0.53168342911599,0.521745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| |||
|short_description=p6@SLC41A3 | |||
}} |
Revision as of 21:05, 21 January 2014
Short description: | p6@SLC41A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC41A3_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENST00000514677_5end |
EntrezGene: | SLC41A3 |
HGNC: | 31046 |
UniProt: | D6R9X6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.84e-34 | 1 |
seminiferous tubule epithelial cell | 1.84e-34 | 1 |
Sertoli cell | 1.84e-34 | 1 |
thoracic aorta endothelial cell | 6.48e-18 | 2 |
mesangial cell | 1.07e-17 | 2 |
kidney interstitial cell | 1.07e-17 | 2 |
juxtaglomerular complex cell | 1.07e-17 | 2 |
renal interstitial pericyte | 1.07e-17 | 2 |
extraglomerular mesangial cell | 1.07e-17 | 2 |
hair follicle dermal papilla cell | 2.31e-12 | 3 |
stem cell of epidermis | 2.31e-12 | 3 |
pericyte cell | 1.57e-09 | 4 |
hair follicle cell | 6.13e-08 | 5 |
amnion mesenchymal stem cell | 7.49e-08 | 5 |
protein secreting cell | 7.17e-07 | 6 |
aortic endothelial cell | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.84e-34 | 1 |
seminiferous tubule of testis | 1.84e-34 | 1 |
epithelium of male gonad | 1.84e-34 | 1 |
epithelial cord | 1.84e-34 | 1 |
sex cord | 1.84e-34 | 1 |
seminiferous tubule epithelium | 1.84e-34 | 1 |
testis sex cord | 1.84e-34 | 1 |
genital ridge | 1.84e-34 | 1 |
primitive sex cord of indifferent gonad | 1.84e-34 | 1 |
coelomic epithelium | 1.84e-34 | 1 |
epithelium of gonad | 5.48e-18 | 2 |
segment of aorta | 6.48e-18 | 2 |
thoracic aorta | 6.48e-18 | 2 |
abdomen connective tissue | 1.07e-17 | 2 |
abdominal segment connective tissue | 1.07e-17 | 2 |
trunk connective tissue | 1.07e-17 | 2 |
interstitial tissue | 1.07e-17 | 2 |
extraglomerular mesangium | 1.07e-17 | 2 |
kidney interstitium | 1.07e-17 | 2 |
juxtaglomerular apparatus | 1.07e-17 | 2 |
mesangium | 1.07e-17 | 2 |
somatic layer of lateral plate mesoderm | 1.71e-17 | 8 |
urogenital ridge | 4.80e-13 | 11 |
dermal papilla | 2.31e-12 | 3 |
papillary layer of dermis | 2.31e-12 | 3 |
pons | 2.59e-12 | 3 |
duct of male reproductive system | 1.12e-09 | 4 |
stroma | 1.57e-09 | 4 |
duct | 5.73e-08 | 19 |
hair follicle | 6.13e-08 | 5 |
hair follicle placode | 6.13e-08 | 5 |
simple squamous epithelium | 4.79e-07 | 22 |
brainstem | 8.48e-07 | 6 |