FFCP PHASE1:Hg19::chr4:88754109..88754112,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=56955 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13361 | |||
|TSSclassifier=strong | |||
|UniProt=D6RAC8 | |||
|association_with_transcript=7bp_to_ENST00000497649_5end | |||
|coexpression_cluster_id=C2381 | |||
|description=CAGE_peak_2_at_MEPE_5end | |||
|id=chr4:88754109..88754112,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000062;1.16e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,2.47e-07,11;CL:0000375,2.47e-07,11;CL:0000335,2.47e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000335;2.55e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000200!1.13e-49!6;UBERON:0001950!2.27e-46!20;UBERON:0001893!4.88e-44!34;UBERON:0002619!3.41e-42!22;UBERON:0002780!5.63e-42!41;UBERON:0001890!5.63e-42!41;UBERON:0006240!5.63e-42!41;UBERON:0003080!6.09e-41!42;UBERON:0001869!2.11e-40!32;UBERON:0002791!4.85e-39!33;UBERON:0000956!3.94e-37!25;UBERON:0000203!3.94e-37!25;UBERON:0002020!2.83e-32!34;UBERON:0003528!2.83e-32!34;UBERON:0000955!4.65e-31!69;UBERON:0006238!4.65e-31!69;UBERON:0001049!1.07e-29!57;UBERON:0005068!1.07e-29!57;UBERON:0006241!1.07e-29!57;UBERON:0007135!1.07e-29!57;UBERON:0001017!4.12e-29!82;UBERON:0002616!1.27e-28!59;UBERON:0005743!1.19e-27!86;UBERON:0003056!1.29e-27!61;UBERON:0001871!2.29e-26!7;UBERON:0002771!5.28e-26!3;UBERON:0007023!1.16e-25!115;UBERON:0000073!8.39e-25!94;UBERON:0001016!8.39e-25!94;UBERON:0000153!4.36e-22!129;UBERON:0007811!4.36e-22!129;UBERON:0003075!1.05e-21!86;UBERON:0007284!1.05e-21!86;UBERON:0002346!1.25e-20!90;UBERON:0000033!1.53e-18!123;UBERON:0001870!3.76e-18!2;UBERON:0004121!1.25e-12!169;UBERON:0000924!2.86e-12!173;UBERON:0006601!2.86e-12!173;UBERON:0002702!5.31e-10!1;UBERON:0002022!1.06e-09!1;UBERON:0007190!1.15e-09!1;UBERON:0003112!1.91e-09!1;UBERON:0000032!1.91e-09!1;UBERON:0005253!1.91e-09!1;UBERON:0003128!1.91e-09!1;UBERON:0002241!1.91e-09!1;UBERON:0001703!1.91e-09!1;UBERON:0004761!1.91e-09!1;UBERON:0009617!1.91e-09!1;UBERON:0001882!2.08e-09!1;UBERON:0005403!2.08e-09!1;UBERON:0002336!2.26e-09!1;UBERON:0001018!2.26e-09!1;UBERON:0002473!2.26e-09!1;UBERON:0005340!2.26e-09!1;UBERON:0002316!2.26e-09!1;UBERON:0003544!2.26e-09!1;UBERON:0001020!2.26e-09!1;UBERON:0005970!2.26e-09!1;UBERON:0002437!2.26e-09!1;UBERON:0002581!2.46e-09!1;UBERON:0000349!1.15e-07!5;UBERON:0001872!1.66e-07!5;UBERON:0000025!5.59e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001876;3.61e-34;2!UBERON:0001905;5.96e-34;2!UBERON:0002757;5.96e-34;2!UBERON:0010134;5.96e-34;2!UBERON:0005408;5.96e-34;2!UBERON:0001899;5.96e-34;2!UBERON:0003296;9.45e-18;4!UBERON:0010133;9.45e-18;4!UBERON:0002784;9.45e-18;4!UBERON:0000349;1.40e-14;5!UBERON:0001871;8.16e-11;6!UBERON:0001894;9.43e-11;7!UBERON:0002420;1.04e-08;9!UBERON:0007245;1.04e-08;9!UBERON:0010009;1.04e-08;9!UBERON:0010011;1.04e-08;9!UBERON:0000454;1.04e-08;9!UBERON:0002780;2.46e-07;41!UBERON:0001890;2.46e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001876,3.61e-34,2;UBERON:0001905,7.05e-34,2;UBERON:0002757,7.05e-34,2;UBERON:0010134,7.05e-34,2;UBERON:0005408,7.05e-34,2;UBERON:0001899,7.05e-34,2;UBERON:0003296,1.03e-17,4;UBERON:0010133,1.03e-17,4;UBERON:0002784,1.03e-17,4;UBERON:0000349,1.40e-14,5;UBERON:0001871,8.16e-11,6;UBERON:0001894,9.89e-11,7;UBERON:0006222,9.89e-11,7;UBERON:0002420,1.04e-08,9;UBERON:0007245,1.04e-08,9;UBERON:0010009,1.04e-08,9;UBERON:0010011,1.04e-08,9;UBERON:0000454,1.04e-08,9;UBERON:0002780,2.10e-07,41;UBERON:0001890,2.10e-07,41;UBERON:0003080,2.10e-07,41;UBERON:0006240,2.10e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,1.73269949833235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.76744607283102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.854183854313742,0.751145584238999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0,0.380494861163441,0,0,0,0,0,1.07140367175657,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271965960763659,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@MEPE | |||
}} |
Revision as of 02:10, 22 January 2014
Short description: | p2@MEPE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_2_at_MEPE_5end |
Coexpression cluster: | C2381_amygdala_Saos2_medial_globus_frontal_middle_olfactory |
Association with transcript: | 7bp_to_ENST00000497649_5end |
EntrezGene: | MEPE |
HGNC: | 13361 |
UniProt: | D6RAC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 2.47e-07 | 11 |
osteoprogenitor cell | 2.47e-07 | 11 |
mesenchyme condensation cell | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
amygdala | 3.61e-34 | 2 |
pineal body | 7.05e-34 | 2 |
regional part of epithalamus | 7.05e-34 | 2 |
secretory circumventricular organ | 7.05e-34 | 2 |
circumventricular organ | 7.05e-34 | 2 |
epithalamus | 7.05e-34 | 2 |
gland of diencephalon | 1.03e-17 | 4 |
neuroendocrine gland | 1.03e-17 | 4 |
regional part of diencephalon | 1.03e-17 | 4 |
limbic system | 1.40e-14 | 5 |
temporal lobe | 8.16e-11 | 6 |
diencephalon | 9.89e-11 | 7 |
future diencephalon | 9.89e-11 | 7 |
basal ganglion | 1.04e-08 | 9 |
nuclear complex of neuraxis | 1.04e-08 | 9 |
aggregate regional part of brain | 1.04e-08 | 9 |
collection of basal ganglia | 1.04e-08 | 9 |
cerebral subcortex | 1.04e-08 | 9 |
regional part of forebrain | 2.10e-07 | 41 |
forebrain | 2.10e-07 | 41 |
anterior neural tube | 2.10e-07 | 41 |
future forebrain | 2.10e-07 | 41 |