FFCP PHASE1:Hg19::chr5:134724641..134724659,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9555 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4740 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=89bp_to_ENST00000513210_5end | |||
|description=CAGE_peak_7_at_H2AFY_5end | |||
|id=chr5:134724641..134724659,- | |||
|ontology_enrichment_celltype=CL:0000763!1.95e-23!112;CL:0000049!1.95e-23!112;CL:0002009!2.08e-19!65;CL:0002194!1.20e-18!63;CL:0000576!1.20e-18!63;CL:0000040!1.20e-18!63;CL:0000559!1.20e-18!63;CL:0000860!3.06e-18!45;CL:0002057!7.84e-18!42;CL:0000766!1.57e-17!76;CL:0000557!1.72e-16!71;CL:0000839!6.94e-16!70;CL:0000037!1.01e-14!172;CL:0000566!1.01e-14!172;CL:0002032!6.48e-14!165;CL:0000837!6.48e-14!165;CL:0000988!4.84e-13!182;CL:0000738!5.96e-10!140;CL:0002087!7.60e-09!119;CL:0002031!6.60e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.46e-23;33!CL:0002057;4.46e-23;33!CL:0000473;7.42e-22;39!CL:0000234;7.42e-22;39!CL:0000576;2.83e-13;48!CL:0000766;3.49e-10;69!CL:0000763;6.79e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.25e-24,48;CL:0000234,2.25e-24,48;CL:0000763,2.33e-24,108;CL:0000049,2.33e-24,108;CL:0000860,9.20e-22,42;CL:0002057,9.20e-22,42;CL:0002009,1.57e-21,61;CL:0002194,3.60e-21,59;CL:0000576,3.60e-21,59;CL:0000040,3.60e-21,59;CL:0000559,3.60e-21,59;CL:0000766,2.45e-20,72;CL:0000037,9.35e-19,168;CL:0000557,1.76e-18,67;CL:0002032,9.83e-18,161;CL:0000837,9.83e-18,161;CL:0000839,1.22e-17,66;CL:0000988,2.31e-17,177;CL:0000738,1.82e-14,136;CL:0002087,2.03e-13,115;CL:0002031,1.73e-11,120;CL:0002320,1.34e-07,361;CL:0000134,1.54e-07,354;CL:0000034,4.97e-07,441;CL:0000723,6.54e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.01e-15;42!CL:0000049;1.27e-08;108 | |||
|ontology_enrichment_disease=DOID:1240!6.68e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.65e-15!80;UBERON:0001474!9.71e-14!86;UBERON:0004765!1.25e-11!101;UBERON:0001434!1.25e-11!101;UBERON:0002390!1.94e-10!102;UBERON:0003061!1.94e-10!102;UBERON:0002405!1.08e-09!115;UBERON:0002193!1.80e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.46e-17,76;UBERON:0001474,9.23e-15,82;UBERON:0004765,4.57e-13,90;UBERON:0002390,5.35e-13,98;UBERON:0003061,5.35e-13,98;UBERON:0002405,1.36e-11,93;UBERON:0001434,3.11e-11,100;UBERON:0002193,1.23e-10,108;UBERON:0002384,3.13e-07,371;UBERON:0002204,4.14e-07,167;UBERON:0003081,6.73e-07,203 | |||
|phase1_expression=0.363356758541113,1.2846031433459,0,0,0.446961094427288,1.74467704820074,0,0,0.783556884599516,0.245733936501509,1.39560233594486,0.436882744260345,0,0.123766352960047,0.662794751455832,1.34465029290355,0,0.730310090387373,0.487932798790507,0.738726348460727,0.816002764977012,0.313454721478088,0.572471974262113,0.958120975510189,0.753255837568817,1.29902789771517,0.656804715599566,0.550975469195755,0.393364276848904,0.383829398097213,0.464448369948228,0.919421224478927,1.204823675113,3.69754010166788,0.387336002901508,0.284338464974843,0.587200878669695,0.553995408531877,4.01088894940283,0.868043482863407,2.23915474239924,2.91504299417082,0.77272670290256,2.61716829803216,3.77875943688809,2.42584061187816,2.55671940596253,4.52284676824008,1.54853185447552,2.3015391385772,1.7931249457037,1.89185783910868,2.41321976515633,3.87290810150296,2.70852973188684,3.57660445130949,2.18324920046277,1.57306439111559,4.59125838556354,0.641858054152187,1.27867425159808,1.64925650093358,3.19141852194611,3.83602275479425,2.61188314765726,2.8369261234557,0.622822248995575,3.26623264833766,3.65038042894141,0.434377689410233,3.63239701580021,0.736555271975129,1.26584954976354,1.26753171787165,0.850417199860174,0.419317291016752,0.898629049171961,1.35159203557356,1.92870704036496,0.855038231223746,0.99458338599545,0.547992461293902,1.75996244461323,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,0.382273228125229,0,2.24203425192614,1.05353633910031,0,0.786021525498329,0.616804496998528,0.334372990781356,0,0,0,0.445641827540694,0.294605907474837,0.221533894583621,0.270803863765016,1.0247305578054,0.910415432919148,1.47994114143309,1.65810010671509,0,0.741432815810302,0.267540828089713,0,0.793165398882963,0,0.34362744548263,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,1.06976078313403,0.434473211648397,0,1.34140171940727,0,0.361439152384566,0,0.434539556882471,0.795285947051099,0.973269740605272,0.283604451492204,1.77383517970051,0.614843499851882,0.130979075497713,0.728590576585084,1.11235332835329,0.324547393654683,0.696518949197069,1.32957960518865,0.476981248610684,0,0.74291500265913,0,0.860234595106124,0,0.56530794192401,0,0.550236083880135,0.417989933073621,0,0.35576626268671,0,0,0.760272105718513,0.24406205754817,0,0.81014194788176,0.0892997282840798,0,0,0,0.949265659568129,0.183201743930407,0,3.87780264148325,0.872188104285069,0.496971951695318,0.25326102332916,0.529636723252875,0.573673241497627,1.06400514659507,0,0,0.49333509683432,0,0.538842688278752,0.980771418680752,0.151357427644931,0.576175924479999,0.234321431833797,0.312160076830321,0,0.448346041655403,0.939475989150119,0.809364721840658,0.98315564691574,0,1.22834317311768,0.516628905878827,0,1.23633464639278,0,0,0.505008341862199,1.25118519871964,0.277064115484183,0,0.612975591598039,0.600952235626387,0.113432183160021,0.538168907066586,0,0,0.300091096084402,0.206105058476878,1.03056216018252,0.37223371266318,0,0.194874010322397,0.504867548488229,0.0920498986422993,0.484938170456436,0,0.10075209822764,0.169560592310488,0.193260853163297,0,0.573609190778008,0.121973706129595,0,0.580969714347592,0.725627385107593,0.252320850875628,0.36497735907583,3.12899064659632,0.643240938192885,1.38134921352481,0.928735856063958,0.721879481669586,1.0647612003586,0.505754070234305,0.241011029883482,0.992645754591546,0.871517776369625,0.237270619111097,0.404493924480493,0.784885860501384,1.53898862778556,0.738155454624648,0,0,0,1.26755034821831,1.96565443335525,1.18157981336281,3.09024169590255,0.491953754172454,0,0.109750285408626,0,0.804231779293047,0.833296006426766,0,0,0,0.115930404975077,0,0.433099343283221,0,0,1.58040879591855,0.858486162094873,0.246217006087397,0.936017060556951,1.63494278517601,0,0.16798212819886,0.425325291727159,0.268675568108545,0.290633938513962,1.53353071666084,0,0.176096868026452,0.829312462163088,0.144119953416961,0.12624243342638,0.126995788584338,0,0,0,0.719792448923265,0,0.285826432630578,0.112131084345361,0.87192013766656,0.07333828582095,0.517086863031111,0,0,0.26593811658487,2.08014873822732,0.514414748524284,1.41849132023278,0.532844358032199,0.285955987316295,0,0,0,0.355391948742546,1.58390374586686,0.301439377059586,0,0.99972991182057,4.86495122564762,3.51579964002488,2.10833939483032,0,0,0,0.579125226670317,0.821905290201534,0,0.448340575974109,0,1.50939302401662,0.256686072559497,0,0,3.09315525111078,0.167516265334349,1.27587750330633,3.74503511973591,5.9832291840805,1.65766205374414,0.12269149171914,1.00034104211935,0,0,0.892144943985809,0,0.234282829985426,0,0,0,0.664225598535437,0.921845842708516,0.0868836144680828,0.391602314925481,1.02943027143257,0.206768026122887,3.23571301227925,1.70764092485511,0,3.32870879020994,0.604780586659361,0,0.153461973288062,1.96462066103151,0.128139149255701,0,0.160853921143607,0,0.771048469013278,1.42049380250502,0.0821271560138091,0,0.697262270759755,0.241718899183244,2.40607764363942,1.10497186723076,0.229628896329213,0.182091168006717,0.917870904715969,0,0.15403067420883,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| |||
|short_description=p7@H2AFY | |||
}} |
Revision as of 07:31, 22 January 2014
Short description: | p7@H2AFY |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_H2AFY_5end |
Coexpression cluster: | NA |
Association with transcript: | 89bp_to_ENST00000513210_5end |
EntrezGene: | H2AFY |
HGNC: | 4740 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.25e-24 | 48 |
phagocyte | 2.25e-24 | 48 |
myeloid cell | 2.33e-24 | 108 |
common myeloid progenitor | 2.33e-24 | 108 |
classical monocyte | 9.20e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.20e-22 | 42 |
macrophage dendritic cell progenitor | 1.57e-21 | 61 |
monopoietic cell | 3.60e-21 | 59 |
monocyte | 3.60e-21 | 59 |
monoblast | 3.60e-21 | 59 |
promonocyte | 3.60e-21 | 59 |
myeloid leukocyte | 2.45e-20 | 72 |
hematopoietic stem cell | 9.35e-19 | 168 |
granulocyte monocyte progenitor cell | 1.76e-18 | 67 |
hematopoietic oligopotent progenitor cell | 9.83e-18 | 161 |
hematopoietic multipotent progenitor cell | 9.83e-18 | 161 |
myeloid lineage restricted progenitor cell | 1.22e-17 | 66 |
hematopoietic cell | 2.31e-17 | 177 |
leukocyte | 1.82e-14 | 136 |
nongranular leukocyte | 2.03e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 1.73e-11 | 120 |
connective tissue cell | 1.34e-07 | 361 |
mesenchymal cell | 1.54e-07 | 354 |
stem cell | 4.97e-07 | 441 |
somatic stem cell | 6.54e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.46e-17 | 76 |
bone element | 9.23e-15 | 82 |
skeletal element | 4.57e-13 | 90 |
hematopoietic system | 5.35e-13 | 98 |
blood island | 5.35e-13 | 98 |
immune system | 1.36e-11 | 93 |
skeletal system | 3.11e-11 | 100 |
hemolymphoid system | 1.23e-10 | 108 |
connective tissue | 3.13e-07 | 371 |
musculoskeletal system | 4.14e-07 | 167 |
lateral plate mesoderm | 6.73e-07 | 203 |