FFCP PHASE1:Hg19::chr5:140718320..140718343,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56113 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8700 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y5H1 | |||
|association_with_transcript=-10bp_to_NM_018915,NM_032009,uc003ljk.1,uc011dao.1_5end | |||
|description=CAGE_peak_1_at_PCDHGA2_5end | |||
|id=chr5:140718320..140718343,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.78e-12!180;CL:0000057!6.92e-09!75;CL:0000183!9.31e-09!59;CL:0000192!2.20e-08!42;CL:0000514!2.20e-08!42;CL:0000680!2.36e-08!57;CL:0000056!2.36e-08!57;CL:0000355!2.36e-08!57;CL:0000187!1.18e-07!54;CL:0000359!6.24e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.92e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.35e-08,43;CL:0000514,2.35e-08,43;CL:0000680,1.97e-07,58;CL:0000056,1.97e-07,58;CL:0000355,1.97e-07,58;CL:0000359,2.69e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.43e-23!365;UBERON:0007023!9.86e-19!115;UBERON:0001049!1.37e-17!57;UBERON:0005068!1.37e-17!57;UBERON:0006241!1.37e-17!57;UBERON:0007135!1.37e-17!57;UBERON:0003075!1.43e-17!86;UBERON:0007284!1.43e-17!86;UBERON:0000119!5.15e-17!312;UBERON:0002616!5.31e-17!59;UBERON:0002346!1.30e-16!90;UBERON:0000483!1.38e-16!309;UBERON:0005743!2.93e-16!86;UBERON:0004111!7.40e-16!241;UBERON:0000477!1.19e-15!286;UBERON:0001017!2.80e-15!82;UBERON:0000025!5.41e-15!194;UBERON:0000955!1.01e-14!69;UBERON:0006238!1.01e-14!69;UBERON:0000468!1.03e-14!659;UBERON:0000481!2.76e-14!347;UBERON:0000033!3.87e-13!123;UBERON:0000073!8.35e-13!94;UBERON:0001016!8.35e-13!94;UBERON:0000153!1.91e-12!129;UBERON:0007811!1.91e-12!129;UBERON:0003080!2.55e-12!42;UBERON:0002780!4.38e-12!41;UBERON:0001890!4.38e-12!41;UBERON:0006240!4.38e-12!41;UBERON:0003056!1.35e-11!61;UBERON:0004121!1.08e-10!169;UBERON:0000924!2.46e-10!173;UBERON:0006601!2.46e-10!173;UBERON:0001893!6.31e-09!34;UBERON:0000914!6.95e-09!83;UBERON:0002329!6.95e-09!83;UBERON:0003077!6.95e-09!83;UBERON:0003059!6.95e-09!83;UBERON:0007282!6.95e-09!83;UBERON:0009618!6.95e-09!83;UBERON:0007285!6.95e-09!83;UBERON:0002020!9.43e-09!34;UBERON:0003528!9.43e-09!34;UBERON:0002385!1.38e-08!63;UBERON:0001015!1.38e-08!63;UBERON:0000383!1.38e-08!63;UBERON:0002791!1.39e-08!33;UBERON:0001134!1.73e-08!61;UBERON:0002036!1.73e-08!61;UBERON:0003082!1.73e-08!61;UBERON:0001869!2.99e-08!32;UBERON:0004290!3.13e-08!70;UBERON:0000480!5.76e-08!626;UBERON:0000467!6.34e-08!625;UBERON:0005256!3.47e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.07e-10;53!UBERON:0002616;2.07e-10;53!UBERON:0002780;2.34e-08;41!UBERON:0001890;2.34e-08;41!UBERON:0001893;3.08e-07;34!UBERON:0000955;3.88e-07;68!UBERON:0003528;6.12e-07;34!UBERON:0002020;6.12e-07;34!UBERON:0001017;7.02e-07;75!UBERON:0002791;8.13e-07;32!UBERON:0001869;8.48e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.02e-18,56;UBERON:0005068,2.02e-18,56;UBERON:0006241,2.02e-18,56;UBERON:0007135,2.02e-18,56;UBERON:0007023,1.33e-17,114;UBERON:0000073,1.30e-16,53;UBERON:0002616,1.30e-16,53;UBERON:0003075,4.06e-15,82;UBERON:0007284,4.06e-15,82;UBERON:0001017,4.09e-15,81;UBERON:0000955,1.16e-13,68;UBERON:0006238,1.16e-13,68;UBERON:0002346,1.36e-13,86;UBERON:0010314,2.16e-12,132;UBERON:0000025,2.80e-12,192;UBERON:0001016,6.65e-12,89;UBERON:0002780,7.42e-12,41;UBERON:0001890,7.42e-12,41;UBERON:0003080,7.42e-12,41;UBERON:0006240,7.42e-12,41;UBERON:0010371,1.22e-11,104;UBERON:0004111,1.34e-11,240;UBERON:0000119,1.76e-10,309;UBERON:0000483,1.76e-10,306;UBERON:0001893,1.44e-08,34;UBERON:0003528,2.28e-08,34;UBERON:0002020,2.28e-08,34;UBERON:0003056,2.30e-08,61;UBERON:0003076,3.61e-08,15;UBERON:0003057,3.61e-08,15;UBERON:0002791,9.55e-08,32;UBERON:0001869,1.00e-07,32;UBERON:0002385,1.55e-07,64;UBERON:0001015,1.55e-07,64;UBERON:0000383,1.55e-07,64;UBERON:0001134,1.77e-07,62;UBERON:0002036,1.77e-07,62;UBERON:0003082,1.77e-07,62;UBERON:0002329,5.41e-07,71;UBERON:0003059,5.41e-07,71;UBERON:0007282,5.41e-07,71;UBERON:0004290,5.41e-07,71;UBERON:0009618,5.41e-07,71;UBERON:0007524,5.58e-07,73;UBERON:0003077,9.48e-07,72;UBERON:0007285,9.48e-07,72 | |||
|phase1_expression=2.54349730978779,2.14100523890983,3.38290569830331,0,2.23480547213644,1.74467704820074,0,2.52687949370732,1.82829939739887,0,0,0.218441372130172,0.527533956456907,3.09415882400117,4.30816588446291,6.72325146451775,4.82155622419182,4.38186054232424,4.39139518911456,1.23121058076788,0.204000691244253,2.19418305034661,1.14494394852423,0.547497700291537,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0.670700859703636,1.2786256184353,1.0843174571537,0.50133791063589,0.869079113764942,3.1811437882044,0.973269740605272,0.189069634328136,0.221729397462564,0.263504357079378,2.35762335895883,0.364295288292542,0,0,0,0,0,0,0,0.39752481473341,1.72046919021225,0,0,0.419499436209906,0.275118041940067,0.417989933073621,1.55050055501597,1.06729878806013,1.33888245105868,0,0.760272105718513,0.732186172644509,0.367663080345869,0.81014194788176,0.267899184852239,0.22452937262617,0,0,0,0.366403487860815,0,0,0,3.47880366186723,1.01304409331664,7.81214166797991,3.44203944898576,0.354668382198357,0.560677600142307,0,1.48000529050296,1.8672662123986,0.538842688278752,0.653847612453835,3.17850598054356,0.576175924479999,0.234321431833797,0.312160076830321,1.71141546463335,0.597794722207204,0.117434498643765,0,0.140450806702248,1.22492502752936,0.245668634623536,1.96318984233954,1.18800285728205,0.989067717114227,1.82032272387605,0.718618141816238,0.336672227908132,0.500474079487857,0.554128230968366,0,2.14541457059314,0.300476117813194,0.340296549480063,3.58779271377724,1.70845911054854,1.27159140695737,6.60200411385685,1.64884046781502,5.41045134095821,2.97786970130544,5.90717162844432,3.50773218580315,2.52433774244115,1.28869858099219,1.61646056818812,6.03516307278244,0.906768884048762,1.3564847384839,0.773043412653187,0.272746120590835,0,2.31750041646231,1.72288698817931,1.74290914304278,1.24393266018445,1.26160425437814,0,3.12899064659632,2.57296375277154,0,2.3218396401599,4.33127689001751,0,0,0,0,0,0.237270619111097,0,0.196221465125346,0.38474715694639,0.738155454624648,0,1.2347220339942,1.47008711385542,0,0.982827216677626,1.77236972004421,0,0,0.343135620597051,0.329250856225877,0,0,0.0925884451585296,0.977424915930974,1.03993478527958,0,0.927443239800615,1.29149563659404,0.721832238805369,0,0.190254152234598,2.37061319387782,0.858486162094873,0,0,0,0,1.17587489739202,0.708875486211932,0.626909658919938,0.290633938513962,0.766765358330422,0.492663237895943,0.176096868026452,0.829312462163088,1.8735593944205,1.76739406796932,0.507983154337352,0.763976851116555,0,0,0.102827492703324,0,1.42913216315289,0.672786506072164,2.1798003441664,0.4400297149257,2.19761916788222,3.57656445851882,0,2.6593811658487,0,0,0,0.266422179016099,2.14466990487221,3.7983512377401,1.64648067356154,0.325736184293735,1.42156779497018,0.791951872933429,1.20575750823834,0,2.19940580600526,0,0,0,2.15662369942424,2.29723871668228,0,1.15825045334063,2.26023954805422,1.43248770591916,0,0,0.215627574859517,0,1.77866236955724,1.30139853857622,0,0.670065061337395,1.27587750330633,0,0,0,3.80343624329334,1.50051156317903,2.44138521329762,1.24782516918484,1.24900292158013,2.05013139544115,0.585707074963566,1.50473049863859,0,0,0,0.553107505625109,1.91143951829782,3.52442083432933,3.43143423810856,0,0,0,0,0,0,0.992431231275107,5.98501695823444,2.52594084989766,3.97231362692673,3.58195074346692,0.965123526861645,1.48418066444991,0.462629081407967,0.355123450626254,0.821271560138091,0.519254429183621,0.464841513839837,0,0.802025881213139,0.184161977871793,0.459257792658427,0,1.83574180943194,0.902399225814824,0.924184045252977,0,0,0.422206515571503,0,0.510281115829547,0.431831832204279,0,1.35473218771926,1.00337954770971,0.254876273045038,0,0.671624264166535,0,0,0.512900250232778,0.984043937099117,1.95227036798582,0.824328093181778,0,0.082509499920588,0,0,3.21367859688319,0.773365746336976,0.154048617114644,1.22802939780904,0.137836572484531,0.537101224341368,1.0151168573996,0.255679882248303,1.69160867728801,0.661139661443912,0.192190067365106,0.255225424989168,0.10115778085555,0.464845549297286,17.6294914225158,1.3940745403212,0.308033580176089,3.72614221221915,4.34966496037536,2.22389062924704,0.715624433709956,1.86079184679834,0.316379424718726,1.5250415513906,1.02359116524534,3.42351190427136,5.09125196681499,2.35484592059769,0.899362287916574,1.37268514868027,0.235624804691373,1.2130948894399,0,0,0.48763373908959,1.46228093778771,0,1.36499911407986,2.54529777516683,2.26016233240486,0.551365343546124,5.30751180192976,3.06915619677634,4.05142873986681,1.9676842561399,1.42037263873893,0,0.845086807596724,1.00387946542836,2.94747123039363,1.07001315444375,0.354761064070598,1.26664581178598,1.31717957183961,0.75894634753143,1.04980416073495,0,0,0,0.470719003883896,1.29151611801369,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,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| |||
|short_description=p1@PCDHGA2 | |||
}} |
Revision as of 07:53, 22 January 2014
Short description: | p1@PCDHGA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PCDHGA2_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_NM_018915, NM_032009, uc003ljk.1, uc011dao.1_5end |
EntrezGene: | PCDHGA2 |
HGNC: | 8700 |
UniProt: | Q9Y5H1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data