FFCP PHASE1:Hg19::chr6:33176265..33176299,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6015 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10018 | |||
|TSSclassifier=strong | |||
|UniProt=Q06587,A8JZZ0 | |||
|association_with_transcript=0bp_to_ENST00000374656,NM_002931,uc003odk.2,uc011dqw.1,uc011dqx.1_5end | |||
|description=CAGE_peak_1_at_RING1_5end | |||
|id=chr6:33176265..33176299,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.23e-08!90;UBERON:0001049!2.69e-08!57;UBERON:0005068!2.69e-08!57;UBERON:0006241!2.69e-08!57;UBERON:0007135!2.69e-08!57;UBERON:0000064!6.39e-08!219;UBERON:0003075!2.15e-07!86;UBERON:0007284!2.15e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.33e-09,86;UBERON:0001049,1.08e-08,56;UBERON:0005068,1.08e-08,56;UBERON:0006241,1.08e-08,56;UBERON:0007135,1.08e-08,56;UBERON:0003075,2.81e-08,82;UBERON:0007284,2.81e-08,82;UBERON:0000073,4.26e-08,53;UBERON:0002616,4.26e-08,53;UBERON:0011216,5.50e-07,223 | |||
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| |||
|short_description=p1@RING1 | |||
}} |
Revision as of 11:22, 22 January 2014
Short description: | p1@RING1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RING1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000374656, NM_002931, uc003odk.2, uc011dqw.1, uc011dqx.1_5end |
EntrezGene: | RING1 |
HGNC: | 10018 |
UniProt: | Q06587A8JZZ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.33e-09 | 86 |
neural tube | 1.08e-08 | 56 |
neural rod | 1.08e-08 | 56 |
future spinal cord | 1.08e-08 | 56 |
neural keel | 1.08e-08 | 56 |
neural plate | 2.81e-08 | 82 |
presumptive neural plate | 2.81e-08 | 82 |
regional part of nervous system | 4.26e-08 | 53 |
regional part of brain | 4.26e-08 | 53 |
organ system subdivision | 5.50e-07 | 223 |