FFCP PHASE1:Hg19::chr6:43028274..43028300,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89953 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21624 | |||
|TSSclassifier=weak | |||
|UniProt=Q9NSK0 | |||
|association_with_transcript=92bp_to_ENST00000394058,NM_201522,uc003otz.1_5end | |||
|coexpression_cluster_id=C211 | |||
|description=CAGE_peak_3_at_KLC4_5end | |||
|id=chr6:43028274..43028300,+ | |||
|ontology_enrichment_celltype=CL:0000181!4.48e-10!12;CL:0000417!4.48e-10!12;CL:0000668!4.48e-10!12;CL:0000414!4.48e-10!12;CL:0000412!4.48e-10!12;CL:0000182!4.48e-10!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.28e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.28e-22,12;CL:0000223,3.59e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.76e-24;11!UBERON:0009497;2.67e-20;13!UBERON:0003104;2.28e-19;31!UBERON:0001041;3.50e-08;30!CL:0000223;3.22e-07;58!UBERON:0006595;5.83e-07;86!UBERON:0006242;6.60e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!9.94e-15!129;UBERON:0004185!9.94e-15!129;UBERON:0009856!8.29e-14!26;UBERON:0004119!7.09e-13!169;UBERON:0000925!7.09e-13!169;UBERON:0006595!7.09e-13!169;UBERON:0007499!1.91e-12!25;UBERON:0009854!4.76e-12!23;UBERON:0005409!4.79e-12!35;UBERON:0001007!5.77e-12!155;UBERON:0001555!5.77e-12!155;UBERON:0007026!5.77e-12!155;UBERON:0000160!2.81e-11!27;UBERON:0000059!4.16e-11!11;UBERON:0009497!7.59e-11!25;UBERON:0000015!7.59e-11!25;UBERON:0002423!7.59e-11!25;UBERON:0006235!7.59e-11!25;UBERON:0004161!7.59e-11!25;UBERON:0008835!1.05e-10!22;UBERON:0003894!1.05e-10!22;UBERON:0000077!6.81e-10!130;UBERON:0002107!3.27e-09!19;UBERON:0006925!3.27e-09!19;UBERON:0008836!3.27e-09!19;UBERON:0005911!7.37e-09!82;UBERON:0003124!8.85e-09!7;UBERON:0009569!1.23e-08!113;UBERON:0001155!6.53e-08!9;UBERON:0002417!8.64e-08!61;UBERON:0000916!8.64e-08!61;UBERON:0003929!2.52e-07!54;UBERON:0000466!3.18e-07!126;UBERON:0005057!3.31e-07!26;UBERON:0004907!4.48e-07!5;UBERON:0005631!5.57e-07!14;UBERON:0000158!5.57e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;8.52e-38;22!UBERON:0000160;2.33e-35;17!UBERON:0000059;1.17e-23;11!UBERON:0002107;2.18e-22;19!UBERON:0006925;2.18e-22;19!UBERON:0004921;5.23e-22;33!UBERON:0002423;1.44e-20;25!UBERON:0004907;2.07e-17;5!UBERON:0001155;2.48e-15;9!UBERON:0001007;1.60e-14;81!UBERON:0002365;9.32e-13;31!UBERON:0002330;9.32e-13;31!UBERON:0001052;1.01e-12;4!UBERON:0002368;3.59e-11;33!UBERON:0002108;4.79e-11;4!UBERON:0000949;1.05e-09;43!UBERON:0005172;3.60e-08;52!UBERON:0005173;3.60e-08;52!UBERON:0001555;4.59e-08;54!UBERON:0002417;4.28e-07;58!UBERON:0000916;4.28e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.22e-35,17;UBERON:0005409,3.84e-33,25;UBERON:0000059,1.16e-23,11;UBERON:0009854,2.11e-22,23;UBERON:0002107,2.21e-22,19;UBERON:0006925,2.21e-22,19;UBERON:0008836,2.21e-22,19;UBERON:0004921,1.56e-21,118;UBERON:0009497,1.46e-20,25;UBERON:0000015,1.46e-20,25;UBERON:0002423,1.46e-20,25;UBERON:0006235,1.46e-20,25;UBERON:0004161,1.46e-20,25;UBERON:0009856,1.33e-19,26;UBERON:0008835,4.04e-19,22;UBERON:0003894,4.04e-19,22;UBERON:0001007,2.79e-18,145;UBERON:0001555,2.79e-18,145;UBERON:0007026,2.79e-18,145;UBERON:0004119,1.27e-17,160;UBERON:0000925,1.27e-17,160;UBERON:0006595,1.27e-17,160;UBERON:0004907,2.07e-17,5;UBERON:0007499,1.22e-16,25;UBERON:0001155,2.44e-15,9;UBERON:0003929,1.09e-14,54;UBERON:0005172,1.47e-14,54;UBERON:0005173,1.47e-14,54;UBERON:0002365,4.05e-13,31;UBERON:0002330,4.05e-13,31;UBERON:0002417,7.73e-13,60;UBERON:0000916,7.73e-13,60;UBERON:0001052,1.01e-12,4;UBERON:0002368,1.92e-11,35;UBERON:0002108,4.63e-11,4;UBERON:0000949,1.68e-10,45;UBERON:0005911,2.95e-10,82;UBERON:0011216,7.14e-10,223;UBERON:0005177,5.68e-09,101;UBERON:0002530,1.25e-07,59;UBERON:0003104,3.53e-07,160;UBERON:0009142,3.53e-07,160;UBERON:0001046,7.20e-07,19 | |||
|phase1_expression=0.54503513781167,0,0.422863212287913,0,0,0.872338524100369,0,0,0,0.245733936501509,0.697801167972428,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929551542956147,0.310983165046111,1.00928340350251,0,0,0,0,0,0,0,0,0,0,0.435758888184812,0,0,0,0,0,0,0,0,63.3775174109154,3.9313088667105,12.9973779469909,0,10.5770057147078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0.744323423456331,0.61384789315225,0,0.384417447767103,0,0.160853921143607,1.48418066444991,0,0,0,0,0.116210378459959,4.3509401852984,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1352180499991,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,17.2283155421506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,3.31540698637377,0.503865495708552,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0.762760950878299,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0.957003479195758,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,7.20900664313098,0,20.9005005526486,28.0410479475585,9.77648231893801,0,0,0,0,0,0,0,0,0,0,25.4080503702194,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0.293977192243133,0,1.39781334593624,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,11.0995557264463,0,1.29681375438695,0,0,0,0,0.471388069233591,0,0.104602846312333,0,0,0,0,0,0.859530882839914,0,0.837847203816763,0,0,0,0,0.223171457441873,0,0,6.98975697164723,17.0959505606675,14.1755276415606,15.9746398934418,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,0,0,0,4.4131196087551,3.14727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,32.6811481102124,9.27548222385549,0.129282956361551,0,0.855434189421647,1.40963004463334,0.533937062838473,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0.327872630709804,0.314108192500469,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.392590874004102,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,2.5224494698241,5.47895232305697,0,0.9555033757741,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0.111855431797792,0,5.36438869921985,0,0,0,0,0,0,0,0,0,0,49.1599387147607,40.87063781424,0,0,0,0.392616934229891,0,0,0,0,0.0644578879735772,0,0,0,0,2.92134555298607,0,0,0,0,0,17.9869125775236,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0.358611026963382,0,0,0.106727345877715,0,1.07790242527904,0,0,0,0,0,0 | |||
|short_description=p3@KLC4 | |||
}} |
Revision as of 11:59, 22 January 2014
Short description: | p3@KLC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KLC4_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | 92bp_to_ENST00000394058, NM_201522, uc003otz.1_5end |
EntrezGene: | KLC4 |
HGNC: | 21624 |
UniProt: | Q9NSK0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.28e-22 | 12 |
endodermal cell | 3.59e-11 | 58 |