FFCP PHASE1:Hg19::chr6:66417112..66417125,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=346007 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21555 | |||
|TSSclassifier=strong | |||
|UniProt=Q5SZM4,Q5T1H1 | |||
|association_with_transcript=0bp_to_ENST00000393380,ENST00000503581,NM_001142800,NM_001142801,uc003peq.2,uc011dxu.1_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_2_at_EYS_5end | |||
|id=chr6:66417112..66417125,- | |||
|ontology_enrichment_celltype=CL:0000242!3.67e-14!2 | |||
|ontology_enrichment_celltype_v019=CL:0002535;1.29e-08;2!CL:0000123;1.67e-08;2!CL:0000242;1.67e-08;2!CL:0000095;2.25e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.29e-08,2;CL:0000242,1.73e-08,2;CL:0000095,2.27e-07,17;CL:0000123,2.27e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0003056;5.37e-20;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;1.45e-09;14!DOID:154;2.31e-08;2!DOID:4236;2.31e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.45e-09,14;DOID:154,2.31e-08,2;DOID:4236,2.31e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0003296!8.72e-16!4;UBERON:0010133!8.72e-16!4;UBERON:0001905!7.88e-15!2;UBERON:0002757!7.88e-15!2;UBERON:0010134!7.88e-15!2;UBERON:0002784!7.88e-15!2;UBERON:0005408!7.88e-15!2;UBERON:0001899!7.88e-15!2;UBERON:0000059!1.66e-09!11;UBERON:0001894!3.12e-09!7;UBERON:0006222!3.12e-09!7;UBERON:0000160!1.07e-07!27;UBERON:0001154!1.11e-07!1;UBERON:0001153!1.11e-07!1;UBERON:0003112!1.44e-07!1;UBERON:0000032!1.44e-07!1;UBERON:0005253!1.44e-07!1;UBERON:0003128!1.44e-07!1;UBERON:0002241!1.44e-07!1;UBERON:0001703!1.44e-07!1;UBERON:0004761!1.44e-07!1;UBERON:0009617!1.44e-07!1;UBERON:0002022!1.99e-07!1;UBERON:0001155!6.83e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.20e-30;2!UBERON:0002757;5.20e-30;2!UBERON:0010134;5.20e-30;2!UBERON:0005408;5.20e-30;2!UBERON:0001899;5.20e-30;2!UBERON:0003296;1.55e-15;4!UBERON:0010133;1.55e-15;4!UBERON:0002784;1.55e-15;4!UBERON:0000966;2.12e-12;5!UBERON:0005388;2.12e-12;5!UBERON:0001802;2.12e-12;5!UBERON:0001894;2.80e-09;7!UBERON:0006955;1.29e-08;2!UBERON:0004801;1.29e-08;2!UBERON:0000970;5.23e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.20e-30,2;UBERON:0002757,5.20e-30,2;UBERON:0010134,5.20e-30,2;UBERON:0005408,5.20e-30,2;UBERON:0001899,5.20e-30,2;UBERON:0003296,1.55e-15,4;UBERON:0010133,1.55e-15,4;UBERON:0002784,1.55e-15,4;UBERON:0000966,1.73e-10,6;UBERON:0005388,1.73e-10,6;UBERON:0001802,1.73e-10,6;UBERON:0001894,2.80e-09,7;UBERON:0006222,2.80e-09,7;UBERON:0006955,1.29e-08,2;UBERON:0004801,1.29e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,51.142347814418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06846023944879,2.62444152044929,5.38237484293206,0,0,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.7618044489807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.1042220343505,0,0,0,0,26.6950896309923,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.8578179737669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.2486927672201,37.6637768885083,0,0.455324382702595,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,11.5792001566183,34.4469673577344,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.701818390386317,3.58111395290463,0,0,2.08886981816315,0,0.231522474323834,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@EYS | |||
}} |
Revision as of 12:31, 22 January 2014
Short description: | p2@EYS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EYS_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000393380, ENST00000503581, NM_001142800, NM_001142801, uc003peq.2, uc011dxu.1_5end |
EntrezGene: | EYS |
HGNC: | 21555 |
UniProt: | Q5SZM4Q5T1H1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.29e-08 | 2 |
Merkel cell | 1.73e-08 | 2 |
neuron associated cell | 2.27e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 2.27e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
pineal body | 5.20e-30 | 2 |
regional part of epithalamus | 5.20e-30 | 2 |
secretory circumventricular organ | 5.20e-30 | 2 |
circumventricular organ | 5.20e-30 | 2 |
epithalamus | 5.20e-30 | 2 |
gland of diencephalon | 1.55e-15 | 4 |
neuroendocrine gland | 1.55e-15 | 4 |
regional part of diencephalon | 1.55e-15 | 4 |
retina | 1.73e-10 | 6 |
photoreceptor array | 1.73e-10 | 6 |
posterior segment of eyeball | 1.73e-10 | 6 |
diencephalon | 2.80e-09 | 7 |
future diencephalon | 2.80e-09 | 7 |
uterine epithelium | 1.29e-08 | 2 |
cervix epithelium | 1.29e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.45e-09 | 14 |
mixed cell type cancer | 2.31e-08 | 2 |
carcinosarcoma | 2.31e-08 | 2 |